RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 BEND2Q8NDZ0 799 aa15.29■□□□□ 0.04
PNKP-213ENST00000599543 FGGYQ96C11 551 aa15.29■□□□□ 0.04
PNKP-213ENST00000599543 ADAT3Q96EY9 351 aaPredicted RBP15.29■□□□□ 0.04
PNKP-213ENST00000599543 FKBP14Q9NWM8 211 aa15.29■□□□□ 0.04
PNKP-213ENST00000599543 CHCHD3Q9NX63 227 aaKnown RBP15.29■□□□□ 0.04
PNKP-213ENST00000599543 CNOT2Q9NZN8 540 aaKnown RBP15.29■□□□□ 0.04
PNKP-213ENST00000599543 POLDIP2Q9Y2S7 368 aa15.29■□□□□ 0.04
PNKP-213ENST00000599543 TRBV2A0A0J9YWF9 115 aa15.28■□□□□ 0.04
PNKP-213ENST00000599543 RFPL4AA6NLU0 287 aa15.28■□□□□ 0.04
PNKP-213ENST00000599543 RFPL4AL1F8VTS6 287 aa15.28■□□□□ 0.04
PNKP-213ENST00000599543 H3BUX3 64 aa15.28■□□□□ 0.04
PNKP-213ENST00000599543 J3QT63 122 aa15.28■□□□□ 0.04
PNKP-213ENST00000599543 ZFPL1O95159 310 aa15.28■□□□□ 0.04
PNKP-213ENST00000599543 HSPA13P48723 471 aa15.28■□□□□ 0.04
PNKP-213ENST00000599543 CCR9P51686 369 aa15.28■□□□□ 0.04
PNKP-213ENST00000599543 TMEM244Q5VVB8 128 aa15.28■□□□□ 0.04
PNKP-213ENST00000599543 Q6ZSR3 168 aa15.28■□□□□ 0.04
PNKP-213ENST00000599543 OR13C3Q8NGS6 347 aa15.28■□□□□ 0.04
PNKP-213ENST00000599543 ZNF488Q96MN9 340 aa15.28■□□□□ 0.04
PNKP-213ENST00000599543 PPA2Q9H2U2 334 aa15.28■□□□□ 0.04
PNKP-213ENST00000599543 C19orf12Q9NSK7 152 aa15.28■□□□□ 0.04
PNKP-213ENST00000599543 FAM230AA0A1W2PPH8 454 aa15.27■□□□□ 0.04
PNKP-213ENST00000599543 SYNGR1O43759 233 aa15.27■□□□□ 0.04
PNKP-213ENST00000599543 RRP9O43818 475 aaKnown RBP15.27■□□□□ 0.04
PNKP-213ENST00000599543 INMTO95050 263 aa15.27■□□□□ 0.04
PNKP-213ENST00000599543 NXPH2O95156 264 aa15.27■□□□□ 0.04
PNKP-213ENST00000599543 CDK1P06493 297 aa15.27■□□□□ 0.04
PNKP-213ENST00000599543 PGA5P0DJD9 388 aa15.27■□□□□ 0.04
PNKP-213ENST00000599543 RPL31P62899 125 aaKnown RBP15.27■□□□□ 0.04
PNKP-213ENST00000599543 UBE2V2Q15819 145 aa15.27■□□□□ 0.04
PNKP-213ENST00000599543 TMEM42Q69YG0 159 aa15.27■□□□□ 0.04
PNKP-213ENST00000599543 HCP5Q6MZN7 132 aa15.27■□□□□ 0.04
PNKP-213ENST00000599543 CD177Q8N6Q3 437 aa15.27■□□□□ 0.04
PNKP-213ENST00000599543 OR13C5Q8NGS8 318 aa15.27■□□□□ 0.04
PNKP-213ENST00000599543 OR5AK2Q8NH90 309 aa15.27■□□□□ 0.04
PNKP-213ENST00000599543 RGP1Q92546 391 aaPredicted RBP15.27■□□□□ 0.04
PNKP-213ENST00000599543 SSX3Q99909 188 aa15.27■□□□□ 0.04
PNKP-213ENST00000599543 FAM234AQ9H0X4 552 aa15.27■□□□□ 0.04
PNKP-213ENST00000599543 hCG_1809904A0A1W2PP81 198 aa15.26■□□□□ 0.03
PNKP-213ENST00000599543 A0A1W2PPE2 198 aa15.26■□□□□ 0.03
PNKP-213ENST00000599543 A0A1W2PR64 198 aa15.26■□□□□ 0.03
PNKP-213ENST00000599543 A0A1W2PRV1 198 aa15.26■□□□□ 0.03
PNKP-213ENST00000599543 ZNF20P17024 532 aa15.26■□□□□ 0.03
PNKP-213ENST00000599543 GABRA5P31644 462 aa15.26■□□□□ 0.03
PNKP-213ENST00000599543 PRDX2P32119 198 aa15.26■□□□□ 0.03
PNKP-213ENST00000599543 SOX2P48431 317 aa15.26■□□□□ 0.03
PNKP-213ENST00000599543 CDK5R1Q15078 307 aa15.26■□□□□ 0.03
PNKP-213ENST00000599543 C2orf68Q2NKX9 166 aa15.26■□□□□ 0.03
PNKP-213ENST00000599543 ANGPTL5Q86XS5 388 aa15.26■□□□□ 0.03
PNKP-213ENST00000599543 MKXQ8IYA7 352 aa15.26■□□□□ 0.03
PNKP-213ENST00000599543 OR52N1Q8NH53 320 aa15.26■□□□□ 0.03
PNKP-213ENST00000599543 C17orf50Q8WW18 174 aa15.26■□□□□ 0.03
PNKP-213ENST00000599543 MYCBPQ99417 103 aaPredicted RBP15.26■□□□□ 0.03
PNKP-213ENST00000599543 BABAM2Q9NXR7 383 aa15.26■□□□□ 0.03
PNKP-213ENST00000599543 SCN3BQ9NY72 215 aa15.26■□□□□ 0.03
PNKP-213ENST00000599543 RAB26Q9ULW5 256 aa15.26■□□□□ 0.03
PNKP-213ENST00000599543 HHLA2Q9UM44 414 aa15.26■□□□□ 0.03
PNKP-213ENST00000599543 PRKDCP78527 4128 aaKnown RBP15.26■□□□□ 0.03
PNKP-213ENST00000599543 DSCAML1Q8TD84 2053 aa15.25■□□□□ 0.03
PNKP-213ENST00000599543 PQLC2LA1A4F0 135 aa15.25■□□□□ 0.03
PNKP-213ENST00000599543 DHRS7CA6NNS2 312 aa15.25■□□□□ 0.03
PNKP-213ENST00000599543 MYL12BO14950 172 aa15.25■□□□□ 0.03
PNKP-213ENST00000599543 NOS1APO75052 506 aaPredicted RBP15.25■□□□□ 0.03
PNKP-213ENST00000599543 ISG15P05161 165 aa15.25■□□□□ 0.03
PNKP-213ENST00000599543 CCDC159P0C7I6 412 aa15.25■□□□□ 0.03
PNKP-213ENST00000599543 CEBPDP49716 269 aaPredicted RBP15.25■□□□□ 0.03
PNKP-213ENST00000599543 MED21Q13503 144 aa15.25■□□□□ 0.03
PNKP-213ENST00000599543 LRRC75BQ2VPJ9 315 aa15.25■□□□□ 0.03
PNKP-213ENST00000599543 SLC35E4Q6ICL7 350 aa15.25■□□□□ 0.03
PNKP-213ENST00000599543 RNF144BQ7Z419 303 aa15.25■□□□□ 0.03
PNKP-213ENST00000599543 ZNF485Q8NCK3 441 aa15.25■□□□□ 0.03
PNKP-213ENST00000599543 TSEN15Q8WW01 171 aaKnown RBP15.25■□□□□ 0.03
PNKP-213ENST00000599543 ZNF184Q99676 751 aaPredicted RBP15.25■□□□□ 0.03
PNKP-213ENST00000599543 NRIP2Q9BQI9 281 aa15.25■□□□□ 0.03
PNKP-213ENST00000599543 COMMD4Q9H0A8 199 aa15.25■□□□□ 0.03
PNKP-213ENST00000599543 HEXA-AS1Q9H8Q6 139 aa15.25■□□□□ 0.03
PNKP-213ENST00000599543 OR14J1Q9UGF5 321 aa15.25■□□□□ 0.03
PNKP-213ENST00000599543 IGKV1-27A0A075B6S5 117 aa15.24■□□□□ 0.03
PNKP-213ENST00000599543 TMEM212A6NML5 194 aa15.24■□□□□ 0.03
PNKP-213ENST00000599543 TSPAN15O95858 294 aa15.24■□□□□ 0.03
PNKP-213ENST00000599543 MT-ND2P03891 347 aa15.24■□□□□ 0.03
PNKP-213ENST00000599543 LY6EQ16553 131 aa15.24■□□□□ 0.03
PNKP-213ENST00000599543 TMEM200BQ69YZ2 307 aa15.24■□□□□ 0.03
PNKP-213ENST00000599543 RPL22L1Q6P5R6 122 aaKnown RBP15.24■□□□□ 0.03
PNKP-213ENST00000599543 NANOGP1Q8N7R0 232 aa15.24■□□□□ 0.03
PNKP-213ENST00000599543 OR4M1Q8NGD0 313 aa15.24■□□□□ 0.03
PNKP-213ENST00000599543 OR4C13Q8NGP0 309 aa15.24■□□□□ 0.03
PNKP-213ENST00000599543 OR13C9Q8NGT0 318 aa15.24■□□□□ 0.03
PNKP-213ENST00000599543 MYDGFQ969H8 173 aa15.24■□□□□ 0.03
PNKP-213ENST00000599543 ORAI1Q96D31 301 aa15.24■□□□□ 0.03
PNKP-213ENST00000599543 SPACA5Q96QH8 159 aa15.24■□□□□ 0.03
PNKP-213ENST00000599543 CHST5Q9GZS9 411 aa15.24■□□□□ 0.03
PNKP-213ENST00000599543 CCDC90BQ9GZT6 254 aa15.24■□□□□ 0.03
PNKP-213ENST00000599543 RAB18Q9NP72 206 aa15.24■□□□□ 0.03
PNKP-213ENST00000599543 FBLN5Q9UBX5 448 aa15.24■□□□□ 0.03
PNKP-213ENST00000599543 IGKV1-9A0A0C4DH69 117 aa15.23■□□□□ 0.03
PNKP-213ENST00000599543 OGG1O15527 345 aa15.23■□□□□ 0.03
PNKP-213ENST00000599543 TK1P04183 234 aa15.23■□□□□ 0.03
PNKP-213ENST00000599543 COX7A1P24310 79 aa15.23■□□□□ 0.03
PNKP-213ENST00000599543 MPZP25189 248 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms