RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	PITPNC1	Q9UKF7	332 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	SESN1	Q9Y6P5	492 aa		8.46	□□□□□ -1.06
LSM4-205	ENST00000597776	hADV38S2	A0JD32	116 aa		8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	METTL15	A6NJ78	407 aa		8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	PSPN	O60542	156 aa		8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	GATB	O75879	557 aa	Known RBP	8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	DNAJC8	O75937	253 aa	Predicted RBP	8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	BCL3	P20749	454 aa		8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	CD24	P25063	80 aa		8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	HTR1F	P30939	366 aa		8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	POLR2I	P36954	125 aa	Known RBP	8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	KIR3DL2	P43630	455 aa		8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	POU3F4	P49335	361 aa		8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	DYNLT3	P51808	116 aa		8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	FUT6	P51993	359 aa		8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	ZNF91	Q05481	1191 aa		8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	MEF2C	Q06413	473 aa	Predicted RBP	8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	ATP6AP1	Q15904	470 aa		8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	KDM4D	Q6B0I6	523 aa		8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	RDH10	Q8IZV5	341 aa		8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	OR4F17	Q8NGA8	305 aa		8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	ADAT3	Q96EY9	351 aa	Predicted RBP	8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	BORCS8	Q96FH0	119 aa		8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	OR4F4	Q96R69	305 aa		8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	CIB1	Q99828	191 aa		8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	ADI1	Q9BV57	179 aa		8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	NECAP2	Q9NVZ3	263 aa		8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	WARS2	Q9UGM6	360 aa	Known RBP	8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	LINC00312	Q9Y6C7	94 aa		8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	DSCAML1	Q8TD84	2053 aa		8.45	□□□□□ -1.06
LSM4-205	ENST00000597776	IGKV1-9	A0A0C4DH69	117 aa		8.44	□□□□□ -1.06
LSM4-205	ENST00000597776	FAM172BP	A6NC97	362 aa		8.44	□□□□□ -1.06
LSM4-205	ENST00000597776	ENTPD6	O75354	484 aa		8.44	□□□□□ -1.06
LSM4-205	ENST00000597776	ALX3	O95076	343 aa		8.44	□□□□□ -1.06
LSM4-205	ENST00000597776	OR2T7	P0C7T2	308 aa		8.44	□□□□□ -1.06
LSM4-205	ENST00000597776	PRKACA	P17612	351 aa		8.44	□□□□□ -1.06
LSM4-205	ENST00000597776	PEX2	P28328	305 aa		8.44	□□□□□ -1.06
LSM4-205	ENST00000597776	OR3A1	P47881	315 aa		8.44	□□□□□ -1.06
LSM4-205	ENST00000597776	LOXL3	P58215	753 aa		8.44	□□□□□ -1.06
LSM4-205	ENST00000597776	TP53I3	Q53FA7	332 aa		8.44	□□□□□ -1.06
LSM4-205	ENST00000597776	MINOS1	Q5TGZ0	78 aa		8.44	□□□□□ -1.06
LSM4-205	ENST00000597776	PRAMEF5	Q5TYX0	476 aa		8.44	□□□□□ -1.06
LSM4-205	ENST00000597776	AMIGO2	Q86SJ2	522 aa		8.44	□□□□□ -1.06
LSM4-205	ENST00000597776	TRAPPC6B	Q86SZ2	158 aa		8.44	□□□□□ -1.06
LSM4-205	ENST00000597776	ZDHHC13	Q8IUH4	622 aa		8.44	□□□□□ -1.06
LSM4-205	ENST00000597776	OR5AU1	Q8NGC0	362 aa		8.44	□□□□□ -1.06
LSM4-205	ENST00000597776	RNF166	Q96A37	237 aa	Predicted RBP	8.44	□□□□□ -1.06
LSM4-205	ENST00000597776	RFT1	Q96AA3	541 aa		8.44	□□□□□ -1.06
LSM4-205	ENST00000597776	OCSTAMP	Q9BR26	566 aa		8.44	□□□□□ -1.06
LSM4-205	ENST00000597776	CLEC7A	Q9BXN2	247 aa		8.44	□□□□□ -1.06
LSM4-205	ENST00000597776	GABARAPL1	Q9H0R8	117 aa		8.44	□□□□□ -1.06
LSM4-205	ENST00000597776	TMEM133	Q9H2Q1	129 aa		8.44	□□□□□ -1.06
LSM4-205	ENST00000597776	GNG8	Q9UK08	70 aa		8.44	□□□□□ -1.06
LSM4-205	ENST00000597776	MINOS1-NBL1	R4GNA1	71 aa		8.44	□□□□□ -1.06
LSM4-205	ENST00000597776	TRBV2	A0A0J9YWF9	115 aa		8.43	□□□□□ -1.06
LSM4-205	ENST00000597776	FAM90A22P	A8MWA6	464 aa		8.43	□□□□□ -1.06
LSM4-205	ENST00000597776	SIRPB1	O00241	398 aa		8.43	□□□□□ -1.06
LSM4-205	ENST00000597776	SULT1C4	O75897	302 aa		8.43	□□□□□ -1.06
LSM4-205	ENST00000597776	SERPINA3	P01011	423 aa		8.43	□□□□□ -1.06
LSM4-205	ENST00000597776	UBC	P0CG48	685 aa	Known RBP	8.43	□□□□□ -1.06
LSM4-205	ENST00000597776	IGLL1	P15814	213 aa		8.43	□□□□□ -1.06
LSM4-205	ENST00000597776	HTR1D	P28221	377 aa		8.43	□□□□□ -1.06
LSM4-205	ENST00000597776	ATP6V1E1	P36543	226 aa		8.43	□□□□□ -1.06
LSM4-205	ENST00000597776	RBP2	P50120	134 aa		8.43	□□□□□ -1.06
LSM4-205	ENST00000597776	MTCP1	P56278	107 aa		8.43	□□□□□ -1.06
LSM4-205	ENST00000597776	P2RX3	P56373	397 aa		8.43	□□□□□ -1.06
LSM4-205	ENST00000597776	ZNF85	Q03923	595 aa		8.43	□□□□□ -1.06
LSM4-205	ENST00000597776	TCTEX1D4	Q5JR98	221 aa		8.43	□□□□□ -1.06
LSM4-205	ENST00000597776	FOXB2	Q5VYV0	432 aa		8.43	□□□□□ -1.06
LSM4-205	ENST00000597776	RNF144B	Q7Z419	303 aa		8.43	□□□□□ -1.06
LSM4-205	ENST00000597776		Q8IYB0	196 aa		8.43	□□□□□ -1.06
LSM4-205	ENST00000597776	ENTHD1	Q8IYW4	607 aa		8.43	□□□□□ -1.06
LSM4-205	ENST00000597776	FAM58A	Q8N1B3	248 aa		8.43	□□□□□ -1.06
LSM4-205	ENST00000597776	OR4P4	Q8NGL7	312 aa		8.43	□□□□□ -1.06
LSM4-205	ENST00000597776	EME1	Q96AY2	570 aa		8.43	□□□□□ -1.06
LSM4-205	ENST00000597776	RIBC2	Q9H4K1	309 aa		8.43	□□□□□ -1.06
LSM4-205	ENST00000597776	IGKV1-12	A0A0C4DH73	117 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	SH2D7	A6NKC9	451 aa	Predicted RBP	8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	MGST3	O14880	152 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	CYB5A	P00167	134 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	IGKV1D-12	P01611	117 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	ALDOB	P05062	364 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	PF4V1	P10720	104 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	ATF1	P18846	271 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	CD33	P20138	364 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	CDK2	P24941	298 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	AZGP1	P25311	298 aa	Known RBP	8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	FAS	P25445	335 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	GDNF	P39905	211 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	ATP1B3	P54709	279 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	ISL1	P61371	349 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	CD83	Q01151	205 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	ZNF146	Q15072	292 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	C10orf99	Q6UWK7	81 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	CCDC121	Q6ZUS5	278 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	FAM220A	Q7Z4H9	259 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	ABHD12	Q8N2K0	398 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	CCDC54	Q8NEL0	328 aa		8.42	□□□□□ -1.06
LSM4-205	ENST00000597776	DNAAF1	Q8NEP3	725 aa		8.42	□□□□□ -1.06

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