RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 TEAD3Q99594 435 aa7.97□□□□□ -1.13
TRIM28-210ENST00000597618 CHST6Q9GZX3 395 aa7.97□□□□□ -1.13
TRIM28-210ENST00000597618 DCLRE1BQ9H816 532 aa7.97□□□□□ -1.13
TRIM28-210ENST00000597618 FGFR1OP2Q9NVK5 253 aa7.97□□□□□ -1.13
TRIM28-210ENST00000597618 NUFIP1Q9UHK0 495 aaKnown RBP7.97□□□□□ -1.13
TRIM28-210ENST00000597618 GLS2Q9UI32 602 aa7.97□□□□□ -1.13
TRIM28-210ENST00000597618 LAMP5Q9UJQ1 280 aa7.97□□□□□ -1.13
TRIM28-210ENST00000597618 TRGV10A0A0A0MS01 117 aa7.96□□□□□ -1.14
TRIM28-210ENST00000597618 MGST3O14880 152 aa7.96□□□□□ -1.14
TRIM28-210ENST00000597618 PRODHO43272 600 aa7.96□□□□□ -1.14
TRIM28-210ENST00000597618 HAND1O96004 215 aa7.96□□□□□ -1.14
TRIM28-210ENST00000597618 ALOX5APP20292 161 aa7.96□□□□□ -1.14
TRIM28-210ENST00000597618 CDK2P24941 298 aa7.96□□□□□ -1.14
TRIM28-210ENST00000597618 ERP29P30040 261 aaKnown RBP7.96□□□□□ -1.14
TRIM28-210ENST00000597618 INSL3P51460 131 aa7.96□□□□□ -1.14
TRIM28-210ENST00000597618 P2RX3P56373 397 aa7.96□□□□□ -1.14
TRIM28-210ENST00000597618 CXorf66Q5JRM2 361 aaPredicted RBP7.96□□□□□ -1.14
TRIM28-210ENST00000597618 CGB2Q6NT52 195 aa7.96□□□□□ -1.14
TRIM28-210ENST00000597618 BAIAP2L2Q6UXY1 529 aa7.96□□□□□ -1.14
TRIM28-210ENST00000597618 ADAMTSL5Q6ZMM2 481 aa7.96□□□□□ -1.14
TRIM28-210ENST00000597618 LCNL1Q6ZST4 164 aa7.96□□□□□ -1.14
TRIM28-210ENST00000597618 SLC35E3Q7Z769 313 aa7.96□□□□□ -1.14
TRIM28-210ENST00000597618 EGFL6Q8IUX8 553 aa7.96□□□□□ -1.14
TRIM28-210ENST00000597618 ENTHD1Q8IYW4 607 aa7.96□□□□□ -1.14
TRIM28-210ENST00000597618 RNF148Q8N7C7 305 aa7.96□□□□□ -1.14
TRIM28-210ENST00000597618 TEX47Q8TBZ9 253 aa7.96□□□□□ -1.14
TRIM28-210ENST00000597618 NSMCE2Q96MF7 247 aa7.96□□□□□ -1.14
TRIM28-210ENST00000597618 GON7Q9BXV9 100 aa7.96□□□□□ -1.14
TRIM28-210ENST00000597618 DGCR6LQ9BY27 220 aa7.96□□□□□ -1.14
TRIM28-210ENST00000597618 MROQ9BYG7 248 aa7.96□□□□□ -1.14
TRIM28-210ENST00000597618 SEBOXQ9HB31 216 aaPredicted RBP7.96□□□□□ -1.14
TRIM28-210ENST00000597618 ZNF286AQ9HBT8 521 aa7.96□□□□□ -1.14
TRIM28-210ENST00000597618 TAS2R1Q9NYW7 299 aa7.96□□□□□ -1.14
TRIM28-210ENST00000597618 LINC00527Q9UJ94 153 aa7.96□□□□□ -1.14
TRIM28-210ENST00000597618 DSCAML1Q8TD84 2053 aa7.96□□□□□ -1.14
TRIM28-210ENST00000597618 FAM172BPA6NC97 362 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 FAM90A18PA6NE21 464 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 FAM90A16PA6NEW6 464 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 FAM90A20PA6NIJ5 464 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 FAM90A9PA6NNJ1 464 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 DHRS7CA6NNS2 312 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 FAM90A12PA8MX19 464 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 FAM90A5PA8MXJ8 464 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 PRR23D1E9PI22 279 aaPredicted RBP7.95□□□□□ -1.14
TRIM28-210ENST00000597618 F8VVB4 439 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 F8VWA3 439 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 LY6LH3BQJ8 138 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 PSPNO60542 156 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 ZNF254O75437 659 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 JTBO76095 146 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 IGHG2P01859 326 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 IGHA1P01876 353 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 RPLP1P05386 114 aaKnown RBP7.95□□□□□ -1.14
TRIM28-210ENST00000597618 FRMD6-AS1P0C7T7 363 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 FAM90A15PP0C7V4 464 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 FAM90A13PP0C7W8 464 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 FAM90A14PP0C7W9 464 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 FAM90A24PP0C7X0 464 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 PRR23D2P0DMB1 279 aaPredicted RBP7.95□□□□□ -1.14
TRIM28-210ENST00000597618 TMEM11P17152 192 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 CDX1P47902 265 aaPredicted RBP7.95□□□□□ -1.14
TRIM28-210ENST00000597618 PRRX1P54821 245 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 FHL3Q13643 280 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 RBM39Q14498 530 aaKnown RBP7.95□□□□□ -1.14
TRIM28-210ENST00000597618 PNLIPRP3Q17RR3 467 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 FAM27D1Q5T7N8 215 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 OVCH2Q7RTZ1 564 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 DRAM1Q8N682 238 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 IQCF1Q8N6M8 205 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 OR52N4Q8NGI2 321 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 OR56B4Q8NH76 319 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 TRMT10AQ8TBZ6 339 aaKnown RBP7.95□□□□□ -1.14
TRIM28-210ENST00000597618 EMG1Q92979 244 aaKnown RBP7.95□□□□□ -1.14
TRIM28-210ENST00000597618 TOMM40LQ969M1 308 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 SLAMF9Q96A28 289 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 RPEQ96AT9 228 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 MOB1AQ9H8S9 216 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 TAS2R3Q9NYW6 316 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 MTCH1Q9NZJ7 389 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 SLC7A11Q9UPY5 501 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 V9GYS6 101 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 HERC2O95714 4834 aa7.95□□□□□ -1.14
TRIM28-210ENST00000597618 A0A087X0M5 115 aa7.94□□□□□ -1.14
TRIM28-210ENST00000597618 A0A1B0GX30 115 aa7.94□□□□□ -1.14
TRIM28-210ENST00000597618 FAM230AA0A1W2PPH8 454 aa7.94□□□□□ -1.14
TRIM28-210ENST00000597618 FUOMA2VDF0 154 aa7.94□□□□□ -1.14
TRIM28-210ENST00000597618 H3BN98 237 aa7.94□□□□□ -1.14
TRIM28-210ENST00000597618 AP4M1O00189 453 aa7.94□□□□□ -1.14
TRIM28-210ENST00000597618 CCRL2O00421 344 aa7.94□□□□□ -1.14
TRIM28-210ENST00000597618 ARPC2O15144 300 aa7.94□□□□□ -1.14
TRIM28-210ENST00000597618 CCDC22O60826 627 aa7.94□□□□□ -1.14
TRIM28-210ENST00000597618 E2F6O75461 281 aa7.94□□□□□ -1.14
TRIM28-210ENST00000597618 TTRP02766 147 aa7.94□□□□□ -1.14
TRIM28-210ENST00000597618 PTGFRP43088 359 aa7.94□□□□□ -1.14
TRIM28-210ENST00000597618 OR3A1P47881 315 aa7.94□□□□□ -1.14
TRIM28-210ENST00000597618 RPS7P62081 194 aaKnown RBP7.94□□□□□ -1.14
TRIM28-210ENST00000597618 ROM1Q03395 351 aa7.94□□□□□ -1.14
TRIM28-210ENST00000597618 ZNF91Q05481 1191 aa7.94□□□□□ -1.14
TRIM28-210ENST00000597618 FOXE3Q13461 319 aa7.94□□□□□ -1.14
TRIM28-210ENST00000597618 HES1Q14469 280 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms