RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 PRKACAP17612 351 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 PRTN3P24158 256 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 DUSP1P28562 367 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 BPIFB3P59826 476 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 BAMBIQ13145 260 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 ZNF273Q14593 569 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 ZNF146Q15072 292 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 SLC9A3R2Q15599 337 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 KISS1Q15726 138 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 C6orf141Q5SZD1 244 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 TMEM200BQ69YZ2 307 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 C1orf122Q6ZSJ8 110 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 TCF23Q7RTU1 214 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 Q8IYB0 196 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 CMTM4Q8IZR5 234 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 FAM185AQ8N0U4 392 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 ASCC1Q8N9N2 400 aaKnown RBP9□□□□□ -0.97
SHKBP1-206ENST00000595523 OR4M1Q8NGD0 313 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 OR52N4Q8NGI2 321 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 GHSRQ92847 366 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 TMEM106AQ96A25 262 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 NKX3-1Q99801 234 aaPredicted RBP9□□□□□ -0.97
SHKBP1-206ENST00000595523 ANKRD60Q9BZ19 345 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 SEBOXQ9HB31 216 aaPredicted RBP9□□□□□ -0.97
SHKBP1-206ENST00000595523 HMG20AQ9NP66 347 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 ZNF281Q9Y2X9 895 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 A0A0U1RQK1 487 aa8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 PNMA8CA0A1B0GUJ8 204 aa8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 MEX3AA1L020 520 aaKnown RBP8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 MAGEA13PA6NCF6 341 aa8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 CLDN34H7C241 214 aa8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 GABRPO00591 440 aa8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 PSPNO60542 156 aa8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 CDK1P06493 297 aa8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 CHRM2P08172 466 aa8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 HCKP08631 526 aa8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 OCM2P0CE71 109 aa8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 OCMP0CE72 109 aaPredicted RBP8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 CCL3L1P16619 93 aa8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 IGFBP3P17936 291 aaPredicted RBP8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 RAB3AP20336 220 aa8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 MYF6P23409 242 aa8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 SNU13P55769 128 aaKnown RBP8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 DLX6P56179 175 aa8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 WNT4P56705 351 aa8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 ERVFRD-1P60508 538 aa8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 RPL31P62899 125 aaKnown RBP8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 MED21Q13503 144 aa8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 RNLSQ5VYX0 342 aa8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 IZUMO2Q6UXV1 221 aa8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 RBMS3Q6XE24 437 aaKnown RBP8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 Q6YL49 198 aa8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 SAXO1Q8IYX7 474 aa8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 OR8H2Q8N162 312 aa8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 PNKDQ8N490 385 aa8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 STX19Q8N4C7 294 aa8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 NANOGP1Q8N7R0 232 aa8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 METTL8Q9H825 291 aaKnown RBP8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 CHCHD3Q9NX63 227 aaKnown RBP8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 LSM2Q9Y333 95 aaKnown RBP8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 PCDHGB5Q9Y5G0 923 aa8.99□□□□□ -0.97
SHKBP1-206ENST00000595523 TRAV8-7A0A075B6U6 113 aa8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 TRBV5-7A0A0A0MS05 114 aa8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 TMEM89A2RUT3 159 aa8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 PTGES3LE9PB15 166 aa8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 MYL12BO14950 172 aa8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 HOXA3O43365 443 aaPredicted RBP8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 ATP6V1G2O95670 118 aa8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 CYB5AP00167 134 aa8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 CD2P06729 351 aa8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 RNASE1P07998 156 aaKnown RBP8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 MELTFP08582 738 aa8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 TMEM225BP0DP42 221 aa8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 OR3A1P47881 315 aa8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 SLC35A2P78381 396 aa8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 IRF3Q14653 427 aa8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 Q499Y3 187 aa8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 YIF1BQ5BJH7 314 aa8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 SPIN3Q5JUX0 258 aa8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 ZSCAN4Q8NAM6 433 aaPredicted RBP8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 OR4S1Q8NGB4 309 aa8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 TAF15Q92804 592 aaKnown RBP eCLIP8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 AJUBAQ96IF1 538 aa8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 SNX22Q96L94 193 aa8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 OR14A2Q96R54 314 aa8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 CDCA4Q9BXL8 241 aa8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 CHST6Q9GZX3 395 aa8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 NEK6Q9HC98 313 aa8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 GSTK1Q9Y2Q3 226 aa8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 VWFP04275 2813 aa8.98□□□□□ -0.97
SHKBP1-206ENST00000595523 TRRAPQ9Y4A5 3859 aa8.97□□□□□ -0.97
SHKBP1-206ENST00000595523 A0A1W2PRD5 423 aa8.97□□□□□ -0.97
SHKBP1-206ENST00000595523 A0A1W2PRF3 423 aa8.97□□□□□ -0.97
SHKBP1-206ENST00000595523 A0A1W2PRM7 423 aa8.97□□□□□ -0.97
SHKBP1-206ENST00000595523 C17orf98A8MV24 154 aa8.97□□□□□ -0.97
SHKBP1-206ENST00000595523 H0YHG0 523 aa8.97□□□□□ -0.97
SHKBP1-206ENST00000595523 SIRPB1O00241 398 aa8.97□□□□□ -0.97
SHKBP1-206ENST00000595523 NPFFO15130 113 aa8.97□□□□□ -0.97
SHKBP1-206ENST00000595523 PIN1P1O15428 100 aa8.97□□□□□ -0.97
SHKBP1-206ENST00000595523 GPX5O75715 221 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms