RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 SAA4P35542 130 aa14.52□□□□□ -0.09
SHKBP1-204ENST00000594862 BMXP51813 675 aa14.52□□□□□ -0.09
SHKBP1-204ENST00000594862 MEF2CQ06413 473 aaPredicted RBP14.52□□□□□ -0.09
SHKBP1-204ENST00000594862 TMEM200BQ69YZ2 307 aa14.52□□□□□ -0.09
SHKBP1-204ENST00000594862 BATF2Q8N1L9 274 aa14.52□□□□□ -0.09
SHKBP1-204ENST00000594862 OR10AC1Q8NH08 325 aa14.52□□□□□ -0.09
SHKBP1-204ENST00000594862 OR5R1Q8NH85 324 aa14.52□□□□□ -0.09
SHKBP1-204ENST00000594862 FAM181BA6NEQ2 426 aa14.51□□□□□ -0.09
SHKBP1-204ENST00000594862 CASQ2O14958 399 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-204ENST00000594862 MAGEB3O15480 346 aa14.51□□□□□ -0.09
SHKBP1-204ENST00000594862 ANGPTL7O43827 346 aa14.51□□□□□ -0.09
SHKBP1-204ENST00000594862 HCKP08631 526 aa14.51□□□□□ -0.09
SHKBP1-204ENST00000594862 ADARB1P78563 741 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-204ENST00000594862 KLRD1Q13241 179 aa14.51□□□□□ -0.09
SHKBP1-204ENST00000594862 ZNF146Q15072 292 aa14.51□□□□□ -0.09
SHKBP1-204ENST00000594862 SMN1Q16637 294 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-204ENST00000594862 OGFRL1Q5TC84 451 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-204ENST00000594862 C8orf59Q8N0T1 100 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-204ENST00000594862 CNIH3Q8TBE1 160 aa14.51□□□□□ -0.09
SHKBP1-204ENST00000594862 GPR148Q8TDV2 347 aa14.51□□□□□ -0.09
SHKBP1-204ENST00000594862 BEX1Q9HBH7 125 aa14.51□□□□□ -0.09
SHKBP1-204ENST00000594862 RBFOX1Q9NWB1 397 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-204ENST00000594862 VPREB3Q9UKI3 123 aa14.51□□□□□ -0.09
SHKBP1-204ENST00000594862 hADV38S2A0JD32 116 aa14.5□□□□□ -0.09
SHKBP1-204ENST00000594862 FUOMA2VDF0 154 aa14.5□□□□□ -0.09
SHKBP1-204ENST00000594862 F8VVB4 439 aa14.5□□□□□ -0.09
SHKBP1-204ENST00000594862 F8VWA3 439 aa14.5□□□□□ -0.09
SHKBP1-204ENST00000594862 KDM4BO94953 1096 aa14.5□□□□□ -0.09
SHKBP1-204ENST00000594862 IGHV4-59P01825 116 aa14.5□□□□□ -0.09
SHKBP1-204ENST00000594862 PIPP12273 146 aaPredicted RBP14.5□□□□□ -0.09
SHKBP1-204ENST00000594862 PRKACAP17612 351 aa14.5□□□□□ -0.09
SHKBP1-204ENST00000594862 RAB3AP20336 220 aa14.5□□□□□ -0.09
SHKBP1-204ENST00000594862 BCL3P20749 454 aa14.5□□□□□ -0.09
SHKBP1-204ENST00000594862 CAPGP40121 348 aa14.5□□□□□ -0.09
SHKBP1-204ENST00000594862 RAG2P55895 527 aa14.5□□□□□ -0.09
SHKBP1-204ENST00000594862 EDDM3BP56851 147 aa14.5□□□□□ -0.09
SHKBP1-204ENST00000594862 CDK5R1Q15078 307 aa14.5□□□□□ -0.09
SHKBP1-204ENST00000594862 BEND2Q8NDZ0 799 aa14.5□□□□□ -0.09
SHKBP1-204ENST00000594862 OR4M1Q8NGD0 313 aa14.5□□□□□ -0.09
SHKBP1-204ENST00000594862 OR52N1Q8NH53 320 aa14.5□□□□□ -0.09
SHKBP1-204ENST00000594862 TMEM80Q96HE8 168 aa14.5□□□□□ -0.09
SHKBP1-204ENST00000594862 PDCD1LG2Q9BQ51 273 aa14.5□□□□□ -0.09
SHKBP1-204ENST00000594862 SLITRK2Q9H156 845 aa14.5□□□□□ -0.09
SHKBP1-204ENST00000594862 DCLRE1BQ9H816 532 aa14.5□□□□□ -0.09
SHKBP1-204ENST00000594862 HMG20AQ9NP66 347 aa14.5□□□□□ -0.09
SHKBP1-204ENST00000594862 EXOSC4Q9NPD3 245 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-204ENST00000594862 TNFRSF19Q9NS68 423 aa14.5□□□□□ -0.09
SHKBP1-204ENST00000594862 EFCAB10A6NFE3 127 aa14.49□□□□□ -0.09
SHKBP1-204ENST00000594862 E9PI62 339 aa14.49□□□□□ -0.09
SHKBP1-204ENST00000594862 SH2D1BO14796 132 aa14.49□□□□□ -0.09
SHKBP1-204ENST00000594862 MGST3O14880 152 aa14.49□□□□□ -0.09
SHKBP1-204ENST00000594862 SPRY1O43609 319 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-204ENST00000594862 GPR137BO60478 399 aa14.49□□□□□ -0.09
SHKBP1-204ENST00000594862 CLIC3O95833 236 aa14.49□□□□□ -0.09
SHKBP1-204ENST00000594862 ZNF728P0DKX0 622 aa14.49□□□□□ -0.09
SHKBP1-204ENST00000594862 GABRR1P24046 479 aa14.49□□□□□ -0.09
SHKBP1-204ENST00000594862 ETV1P50549 477 aa14.49□□□□□ -0.09
SHKBP1-204ENST00000594862 KISS1Q15726 138 aa14.49□□□□□ -0.09
SHKBP1-204ENST00000594862 GRK1Q15835 563 aa14.49□□□□□ -0.09
SHKBP1-204ENST00000594862 AANATQ16613 207 aa14.49□□□□□ -0.09
SHKBP1-204ENST00000594862 CHST4Q8NCG5 386 aa14.49□□□□□ -0.09
SHKBP1-204ENST00000594862 RPS4Y2Q8TD47 263 aa14.49□□□□□ -0.09
SHKBP1-204ENST00000594862 SMIM19Q96E16 107 aa14.49□□□□□ -0.09
SHKBP1-204ENST00000594862 CNOT2Q9NZN8 540 aaKnown RBP14.49□□□□□ -0.09
SHKBP1-204ENST00000594862 LINC00312Q9Y6C7 94 aa14.49□□□□□ -0.09
SHKBP1-204ENST00000594862 C17orf98A8MV24 154 aa14.48□□□□□ -0.09
SHKBP1-204ENST00000594862 INMTO95050 263 aa14.48□□□□□ -0.09
SHKBP1-204ENST00000594862 ERP29P30040 261 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-204ENST00000594862 NPBWR2P48146 333 aa14.48□□□□□ -0.09
SHKBP1-204ENST00000594862 LGALS4P56470 323 aa14.48□□□□□ -0.09
SHKBP1-204ENST00000594862 TAS2R43P59537 309 aa14.48□□□□□ -0.09
SHKBP1-204ENST00000594862 PPP3R1P63098 170 aa14.48□□□□□ -0.09
SHKBP1-204ENST00000594862 ZNF273Q14593 569 aa14.48□□□□□ -0.09
SHKBP1-204ENST00000594862 OR13D1Q8NGV5 346 aa14.48□□□□□ -0.09
SHKBP1-204ENST00000594862 ZNF714Q96N38 554 aa14.48□□□□□ -0.09
SHKBP1-204ENST00000594862 BABAM2Q9NXR7 383 aa14.48□□□□□ -0.09
SHKBP1-204ENST00000594862 C1RLQ9NZP8 487 aa14.48□□□□□ -0.09
SHKBP1-204ENST00000594862 A0A1W2PRD5 423 aa14.47□□□□□ -0.09
SHKBP1-204ENST00000594862 A0A1W2PRF3 423 aa14.47□□□□□ -0.09
SHKBP1-204ENST00000594862 A0A1W2PRM7 423 aa14.47□□□□□ -0.09
SHKBP1-204ENST00000594862 TMEM82A0PJX8 343 aa14.47□□□□□ -0.09
SHKBP1-204ENST00000594862 TMEM225BP0DP42 221 aa14.47□□□□□ -0.09
SHKBP1-204ENST00000594862 CCL3L1P16619 93 aa14.47□□□□□ -0.09
SHKBP1-204ENST00000594862 MTNR1BP49286 362 aa14.47□□□□□ -0.09
SHKBP1-204ENST00000594862 EDDM3AQ14507 147 aa14.47□□□□□ -0.09
SHKBP1-204ENST00000594862 DHRS7BQ6IAN0 325 aaPredicted RBP14.47□□□□□ -0.09
SHKBP1-204ENST00000594862 HCP5Q6MZN7 132 aa14.47□□□□□ -0.09
SHKBP1-204ENST00000594862 C17orf107Q6ZR85 190 aa14.47□□□□□ -0.09
SHKBP1-204ENST00000594862 PXT1Q8NFP0 134 aa14.47□□□□□ -0.09
SHKBP1-204ENST00000594862 RFT1Q96AA3 541 aa14.47□□□□□ -0.09
SHKBP1-204ENST00000594862 FOXRED1Q96CU9 486 aaPredicted RBP14.47□□□□□ -0.09
SHKBP1-204ENST00000594862 ZNF281Q9Y2X9 895 aa14.47□□□□□ -0.09
SHKBP1-204ENST00000594862 OGG1O15527 345 aa14.46□□□□□ -0.09
SHKBP1-204ENST00000594862 ALDOBP05062 364 aa14.46□□□□□ -0.09
SHKBP1-204ENST00000594862 MDKP21741 143 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-204ENST00000594862 TGFBR2P37173 567 aa14.46□□□□□ -0.09
SHKBP1-204ENST00000594862 GTF2A1P52655 376 aaPredicted RBP14.46□□□□□ -0.09
SHKBP1-204ENST00000594862 DLX1P56177 255 aa14.46□□□□□ -0.09
SHKBP1-204ENST00000594862 DLX6P56179 175 aa14.46□□□□□ -0.09
SHKBP1-204ENST00000594862 P2RX3P56373 397 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms