RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 ASPHD2Q6ICH7 369 aa11.92□□□□□ -0.5
DDX39A-217ENST00000592391 PDZD9Q8IXQ8 264 aa11.92□□□□□ -0.5
DDX39A-217ENST00000592391 ASCC1Q8N9N2 400 aaKnown RBP11.92□□□□□ -0.5
DDX39A-217ENST00000592391 ZSCAN4Q8NAM6 433 aaPredicted RBP11.92□□□□□ -0.5
DDX39A-217ENST00000592391 TBC1D15Q8TC07 691 aa11.92□□□□□ -0.5
DDX39A-217ENST00000592391 GHSRQ92847 366 aa11.92□□□□□ -0.5
DDX39A-217ENST00000592391 TMEM106AQ96A25 262 aa11.92□□□□□ -0.5
DDX39A-217ENST00000592391 METTL8Q9H825 291 aaKnown RBP11.92□□□□□ -0.5
DDX39A-217ENST00000592391 RHOFQ9HBH0 211 aa11.92□□□□□ -0.5
DDX39A-217ENST00000592391 HMG20AQ9NP66 347 aa11.92□□□□□ -0.5
DDX39A-217ENST00000592391 TAS2R4Q9NYW5 299 aa11.92□□□□□ -0.5
DDX39A-217ENST00000592391 IL36RNQ9UBH0 155 aa11.92□□□□□ -0.5
DDX39A-217ENST00000592391 A0A1W2PPH5 198 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 RNASEK-C17orf49H0YIS7 233 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 CLDN34H7C241 214 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 MAGEB3O15480 346 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 CDK1P06493 297 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 MYF6P23409 242 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 WNT4P56705 351 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 ZP1P60852 638 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 ACTG1P63261 375 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 GUCA2AQ02747 115 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 YIF1BQ5BJH7 314 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 RNLSQ5VYX0 342 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 NCR3LG1Q68D85 454 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 TMEM200BQ69YZ2 307 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 OR8H2Q8N162 312 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 NANOGP1Q8N7R0 232 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 ZFP41Q8N8Y5 198 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 OR4M1Q8NGD0 313 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 OR51A2Q8NGJ7 313 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 TNFRSF14Q92956 283 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 ZDHHC16Q969W1 377 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 CPNE2Q96FN4 548 aaPredicted RBP11.91□□□□□ -0.5
DDX39A-217ENST00000592391 SNX22Q96L94 193 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 PGLYRP3Q96LB9 341 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 DUX5Q96PT3 197 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 ANKRD60Q9BZ19 345 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 NOX4Q9NPH5 578 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 GLS2Q9UI32 602 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 ERGIC3Q9Y282 383 aa11.91□□□□□ -0.5
DDX39A-217ENST00000592391 TRBV5-5A0A0J9YX44 114 aa11.9□□□□□ -0.5
DDX39A-217ENST00000592391 TMEM82A0PJX8 343 aa11.9□□□□□ -0.5
DDX39A-217ENST00000592391 RNASE1P07998 156 aaKnown RBP11.9□□□□□ -0.5
DDX39A-217ENST00000592391 TMEM225BP0DP42 221 aa11.9□□□□□ -0.5
DDX39A-217ENST00000592391 CALCBP10092 127 aa11.9□□□□□ -0.5
DDX39A-217ENST00000592391 DUSP1P28562 367 aa11.9□□□□□ -0.5
DDX39A-217ENST00000592391 DLX1P56177 255 aa11.9□□□□□ -0.5
DDX39A-217ENST00000592391 RPS11P62280 158 aaKnown RBP eCLIP11.9□□□□□ -0.5
DDX39A-217ENST00000592391 PPP3R1P63098 170 aa11.9□□□□□ -0.5
DDX39A-217ENST00000592391 PRB3Q04118 309 aaPredicted RBP11.9□□□□□ -0.5
DDX39A-217ENST00000592391 KLRD1Q13241 179 aa11.9□□□□□ -0.5
DDX39A-217ENST00000592391 SLC9A3R2Q15599 337 aa11.9□□□□□ -0.5
DDX39A-217ENST00000592391 Q499Y3 187 aa11.9□□□□□ -0.5
DDX39A-217ENST00000592391 C17orf107Q6ZR85 190 aa11.9□□□□□ -0.5
DDX39A-217ENST00000592391 GDPD3Q7L5L3 318 aa11.9□□□□□ -0.5
DDX39A-217ENST00000592391 PIP4P2Q8N4L2 257 aa11.9□□□□□ -0.5
DDX39A-217ENST00000592391 OR5D13Q8NGL4 314 aa11.9□□□□□ -0.5
DDX39A-217ENST00000592391 OR13C5Q8NGS8 318 aa11.9□□□□□ -0.5
DDX39A-217ENST00000592391 MYDGFQ969H8 173 aa11.9□□□□□ -0.5
DDX39A-217ENST00000592391 SLC25A28Q96A46 364 aa11.9□□□□□ -0.5
DDX39A-217ENST00000592391 SCN3BQ9NY72 215 aa11.9□□□□□ -0.5
DDX39A-217ENST00000592391 GSTK1Q9Y2Q3 226 aa11.9□□□□□ -0.5
DDX39A-217ENST00000592391 PTGES3LE9PB15 166 aa11.89□□□□□ -0.51
DDX39A-217ENST00000592391 HOXA3O43365 443 aaPredicted RBP11.89□□□□□ -0.51
DDX39A-217ENST00000592391 ALDOBP05062 364 aa11.89□□□□□ -0.51
DDX39A-217ENST00000592391 CD1AP06126 327 aa11.89□□□□□ -0.51
DDX39A-217ENST00000592391 GABRR1P24046 479 aa11.89□□□□□ -0.51
DDX39A-217ENST00000592391 EEF1B2P24534 225 aaKnown RBP11.89□□□□□ -0.51
DDX39A-217ENST00000592391 HSPA13P48723 471 aa11.89□□□□□ -0.51
DDX39A-217ENST00000592391 UBE2E1P51965 193 aa11.89□□□□□ -0.51
DDX39A-217ENST00000592391 SNU13P55769 128 aaKnown RBP11.89□□□□□ -0.51
DDX39A-217ENST00000592391 RIPK1Q13546 671 aa11.89□□□□□ -0.51
DDX39A-217ENST00000592391 DOC2BQ14184 412 aa11.89□□□□□ -0.51
DDX39A-217ENST00000592391 ZNF273Q14593 569 aa11.89□□□□□ -0.51
DDX39A-217ENST00000592391 IZUMO2Q6UXV1 221 aa11.89□□□□□ -0.51
DDX39A-217ENST00000592391 Q6YL49 198 aa11.89□□□□□ -0.51
DDX39A-217ENST00000592391 PXT1Q8NFP0 134 aa11.89□□□□□ -0.51
DDX39A-217ENST00000592391 OR52N4Q8NGI2 321 aa11.89□□□□□ -0.51
DDX39A-217ENST00000592391 GPER1Q99527 375 aa11.89□□□□□ -0.51
DDX39A-217ENST00000592391 MND1Q9BWT6 205 aa11.89□□□□□ -0.51
DDX39A-217ENST00000592391 CDCA4Q9BXL8 241 aa11.89□□□□□ -0.51
DDX39A-217ENST00000592391 EXOSC4Q9NPD3 245 aaKnown RBP11.89□□□□□ -0.51
DDX39A-217ENST00000592391 TMEM138Q9NPI0 162 aa11.89□□□□□ -0.51
DDX39A-217ENST00000592391 PCDHGB5Q9Y5G0 923 aa11.89□□□□□ -0.51
DDX39A-217ENST00000592391 A0A0U1RQK1 487 aa11.88□□□□□ -0.51
DDX39A-217ENST00000592391 PNMA8CA0A1B0GUJ8 204 aa11.88□□□□□ -0.51
DDX39A-217ENST00000592391 hCG_1809904A0A1W2PP81 198 aa11.88□□□□□ -0.51
DDX39A-217ENST00000592391 A0A1W2PPE2 198 aa11.88□□□□□ -0.51
DDX39A-217ENST00000592391 A0A1W2PR64 198 aa11.88□□□□□ -0.51
DDX39A-217ENST00000592391 A0A1W2PRV1 198 aa11.88□□□□□ -0.51
DDX39A-217ENST00000592391 TMEM89A2RUT3 159 aa11.88□□□□□ -0.51
DDX39A-217ENST00000592391 GABRPO00591 440 aa11.88□□□□□ -0.51
DDX39A-217ENST00000592391 SH2D1BO14796 132 aa11.88□□□□□ -0.51
DDX39A-217ENST00000592391 NPFFO15130 113 aa11.88□□□□□ -0.51
DDX39A-217ENST00000592391 PSPNO60542 156 aa11.88□□□□□ -0.51
DDX39A-217ENST00000592391 ATP6V1G2O95670 118 aa11.88□□□□□ -0.51
DDX39A-217ENST00000592391 MELTFP08582 738 aa11.88□□□□□ -0.51
DDX39A-217ENST00000592391 CCL3L1P16619 93 aa11.88□□□□□ -0.51
DDX39A-217ENST00000592391 IGFBP3P17936 291 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms