RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 PXT1Q8NFP0 134 aa9.82□□□□□ -0.84
LIG3-213ENST00000590630 OR52N4Q8NGI2 321 aa9.82□□□□□ -0.84
LIG3-213ENST00000590630 ZNF418Q8TF45 676 aaPredicted RBP9.82□□□□□ -0.84
LIG3-213ENST00000590630 DERL3Q96Q80 235 aa9.82□□□□□ -0.84
LIG3-213ENST00000590630 GPER1Q99527 375 aa9.82□□□□□ -0.84
LIG3-213ENST00000590630 PCGF1Q9BSM1 259 aa9.82□□□□□ -0.84
LIG3-213ENST00000590630 CCDC90BQ9GZT6 254 aa9.82□□□□□ -0.84
LIG3-213ENST00000590630 SIRPDQ9H106 197 aa9.82□□□□□ -0.84
LIG3-213ENST00000590630 OCEL1Q9H607 264 aa9.82□□□□□ -0.84
LIG3-213ENST00000590630 HMG20AQ9NP66 347 aa9.82□□□□□ -0.84
LIG3-213ENST00000590630 GLS2Q9UI32 602 aa9.82□□□□□ -0.84
LIG3-213ENST00000590630 TRAV40A0A0B4J280 105 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 A0A1W2PQ09 198 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 K7N7A8 449 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 ZNF737O75373 536 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 HAND1O96004 215 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 TK1P04183 234 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 SFTPBP07988 381 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 IGHV4-38-2P0DP08 117 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 PRKACAP17612 351 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 ZNF93P35789 620 aaPredicted RBP9.81□□□□□ -0.84
LIG3-213ENST00000590630 BMXP51813 675 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 BPIFB3P59826 476 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 GABARAPL2P60520 117 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 ARF6P62330 175 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 COL10A1Q03692 680 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 PDCD1Q15116 288 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 TBCEQ15813 527 aaPredicted RBP9.81□□□□□ -0.84
LIG3-213ENST00000590630 DDI2Q5TDH0 399 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 GPR157Q5UAW9 335 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 C1orf122Q6ZSJ8 110 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 C9orf139Q6ZV77 190 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 USP43Q70EL4 1123 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 SATL1Q86VE3 508 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 ASCC1Q8N9N2 400 aaKnown RBP9.81□□□□□ -0.84
LIG3-213ENST00000590630 OR5D13Q8NGL4 314 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 TBC1D15Q8TC07 691 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 UFD1Q92890 307 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 TBX15Q96SF7 602 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 SUCNR1Q9BXA5 334 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 ELL3Q9HB65 397 aaPredicted RBP9.81□□□□□ -0.84
LIG3-213ENST00000590630 ISYNA1Q9NPH2 558 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 ONECUT1Q9UBC0 465 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 FOXJ3Q9UPW0 622 aa9.81□□□□□ -0.84
LIG3-213ENST00000590630 TRAV8-7A0A075B6U6 113 aa9.8□□□□□ -0.84
LIG3-213ENST00000590630 A0A1W2PPH5 198 aa9.8□□□□□ -0.84
LIG3-213ENST00000590630 M0R1W7 72 aa9.8□□□□□ -0.84
LIG3-213ENST00000590630 GABRPO00591 440 aa9.8□□□□□ -0.84
LIG3-213ENST00000590630 SH2D1BO14796 132 aa9.8□□□□□ -0.84
LIG3-213ENST00000590630 MRPS14O60783 128 aaKnown RBP9.8□□□□□ -0.84
LIG3-213ENST00000590630 HSMCR30P0CW71 290 aa9.8□□□□□ -0.84
LIG3-213ENST00000590630 TGFBR2P37173 567 aa9.8□□□□□ -0.84
LIG3-213ENST00000590630 PTGFRP43088 359 aa9.8□□□□□ -0.84
LIG3-213ENST00000590630 MTNR1BP49286 362 aa9.8□□□□□ -0.84
LIG3-213ENST00000590630 RPL31P62899 125 aaKnown RBP9.8□□□□□ -0.84
LIG3-213ENST00000590630 MLLT11Q13015 90 aaPredicted RBP9.8□□□□□ -0.84
LIG3-213ENST00000590630 TPBGQ13641 420 aa9.8□□□□□ -0.84
LIG3-213ENST00000590630 TUSC1Q2TAM9 212 aa9.8□□□□□ -0.84
LIG3-213ENST00000590630 ELP2Q6IA86 826 aa9.8□□□□□ -0.84
LIG3-213ENST00000590630 OR8H2Q8N162 312 aa9.8□□□□□ -0.84
LIG3-213ENST00000590630 TNFAIP8L1Q8WVP5 186 aa9.8□□□□□ -0.84
LIG3-213ENST00000590630 ORAI1Q96D31 301 aa9.8□□□□□ -0.84
LIG3-213ENST00000590630 SNX22Q96L94 193 aa9.8□□□□□ -0.84
LIG3-213ENST00000590630 SLC6A7Q99884 636 aa9.8□□□□□ -0.84
LIG3-213ENST00000590630 YTHDF1Q9BYJ9 559 aaKnown RBP9.8□□□□□ -0.84
LIG3-213ENST00000590630 FAM192AQ9GZU8 254 aa9.8□□□□□ -0.84
LIG3-213ENST00000590630 MS4A7Q9GZW8 240 aaPredicted RBP9.8□□□□□ -0.84
LIG3-213ENST00000590630 IL36RNQ9UBH0 155 aa9.8□□□□□ -0.84
LIG3-213ENST00000590630 ZNF69Q9UC07 566 aa9.8□□□□□ -0.84
LIG3-213ENST00000590630 GSTK1Q9Y2Q3 226 aa9.8□□□□□ -0.84
LIG3-213ENST00000590630 KIAA2026Q5HYC2 2103 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 A0A1W2PPK0 400 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 PSMA1P25786 263 aaKnown RBP9.79□□□□□ -0.84
LIG3-213ENST00000590630 DUSP1P28562 367 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 OR3A4PP47883 348 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 HILS1P60008 231 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 BLMHQ13867 455 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 RSU1Q15404 277 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 TRAM1Q15629 374 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 ACSM3Q53FZ2 586 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 LIPKQ5VXJ0 399 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 METAP1DQ6UB28 335 aaPredicted RBP9.79□□□□□ -0.84
LIG3-213ENST00000590630 ASCL4Q6XD76 172 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 C17orf107Q6ZR85 190 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 GDPD3Q7L5L3 318 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 ZNF367Q7RTV3 350 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 VMO1Q7Z5L0 202 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 CDH26Q8IXH8 852 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 FAM185AQ8N0U4 392 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 NKAIN3Q8N8D7 197 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 CHST4Q8NCG5 386 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 Q8NFD4 153 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 PPP1R35Q8TAP8 253 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 C22orf15Q8WYQ4 148 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 TMEM158Q8WZ71 300 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 JMJD8Q96S16 334 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 S100A13Q99584 98 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 TMED9Q9BVK6 235 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 METTL8Q9H825 291 aaKnown RBP9.79□□□□□ -0.84
LIG3-213ENST00000590630 UNKLQ9H9P5 680 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms