RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 CCL13Q99616 98 aa11.38□□□□□ -0.59
VMP1-210ENST00000589823 BANF2Q9H503 90 aa11.38□□□□□ -0.59
VMP1-210ENST00000589823 ZNF665Q9H7R5 613 aa11.38□□□□□ -0.59
VMP1-210ENST00000589823 LIN7BQ9HAP6 207 aa11.38□□□□□ -0.59
VMP1-210ENST00000589823 IL36RNQ9UBH0 155 aa11.38□□□□□ -0.59
VMP1-210ENST00000589823 ST3GAL6Q9Y274 331 aa11.38□□□□□ -0.59
VMP1-210ENST00000589823 PRRC2AP48634 2157 aaKnown RBP11.37□□□□□ -0.59
VMP1-210ENST00000589823 A0A1W2PP11 408 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 H3BMQ9 156 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 MPIG6BO95866 241 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 HAND1O96004 215 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 IGHV2-5P01817 119 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 CHRM2P08172 466 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 VSIG8P0DPA2 414 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 MGMTP16455 207 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 DUSP1P28562 367 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 CEBPDP49716 269 aaPredicted RBP11.37□□□□□ -0.59
VMP1-210ENST00000589823 RORCP51449 518 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 RBM11P57052 281 aaKnown RBP11.37□□□□□ -0.59
VMP1-210ENST00000589823 IL13RA1P78552 427 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 IL13RA2Q14627 380 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 C2orf76Q3KRA6 126 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 PIGYQ3MUY2 71 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 NHLRC3Q5JS37 347 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 IDNKQ5T6J7 187 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 LYPD2Q6UXB3 125 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 ZNF788Q6ZQV5 615 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 OR2W3Q7Z3T1 314 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 LINC00596Q86U02 117 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 FAM46BQ96A09 425 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 SLC25A46Q96AG3 418 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 C1orf147Q96MC9 270 aaPredicted RBP11.37□□□□□ -0.59
VMP1-210ENST00000589823 MRI1Q9BV20 369 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 TMEM59Q9BXS4 323 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 SELENOIQ9C0D9 397 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 RBM38Q9H0Z9 239 aaKnown RBP11.37□□□□□ -0.59
VMP1-210ENST00000589823 SEBOXQ9HB31 216 aaPredicted RBP11.37□□□□□ -0.59
VMP1-210ENST00000589823 KAAG1Q9UBP8 84 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 RSL24D1Q9UHA3 163 aaKnown RBP11.37□□□□□ -0.59
VMP1-210ENST00000589823 ZNF222Q9UK12 451 aa11.37□□□□□ -0.59
VMP1-210ENST00000589823 A0A096LNT2 108 aa11.36□□□□□ -0.59
VMP1-210ENST00000589823 DPPA5A6NC42 116 aa11.36□□□□□ -0.59
VMP1-210ENST00000589823 TMEM14DPA8MWL7 114 aa11.36□□□□□ -0.59
VMP1-210ENST00000589823 F5H0A9 414 aaPredicted RBP11.36□□□□□ -0.59
VMP1-210ENST00000589823 H7C1Q1 480 aa11.36□□□□□ -0.59
VMP1-210ENST00000589823 ZNF701M0R085 212 aaPredicted RBP11.36□□□□□ -0.59
VMP1-210ENST00000589823 TNFRSF13BO14836 293 aaPredicted RBP11.36□□□□□ -0.59
VMP1-210ENST00000589823 DEGS1O15121 323 aa11.36□□□□□ -0.59
VMP1-210ENST00000589823 SIGLEC5O15389 551 aa11.36□□□□□ -0.59
VMP1-210ENST00000589823 NDUFB3O43676 98 aa11.36□□□□□ -0.59
VMP1-210ENST00000589823 TFF1P04155 84 aa11.36□□□□□ -0.59
VMP1-210ENST00000589823 WNT2P09544 360 aa11.36□□□□□ -0.59
VMP1-210ENST00000589823 ZNF44P15621 663 aa11.36□□□□□ -0.59
VMP1-210ENST00000589823 LMO4P61968 165 aa11.36□□□□□ -0.59
VMP1-210ENST00000589823 COL10A1Q03692 680 aa11.36□□□□□ -0.59
VMP1-210ENST00000589823 SCN1BQ07699 218 aa11.36□□□□□ -0.59
VMP1-210ENST00000589823 IKZF1Q13422 519 aa11.36□□□□□ -0.59
VMP1-210ENST00000589823 SPCS2Q15005 226 aa11.36□□□□□ -0.59
VMP1-210ENST00000589823 ESCO2Q56NI9 601 aa11.36□□□□□ -0.59
VMP1-210ENST00000589823 OR10K2Q6IF99 312 aa11.36□□□□□ -0.59
VMP1-210ENST00000589823 ZNF561Q8N587 486 aa11.36□□□□□ -0.59
VMP1-210ENST00000589823 CD177Q8N6Q3 437 aa11.36□□□□□ -0.59
VMP1-210ENST00000589823 FAM216BQ8N7L0 139 aa11.36□□□□□ -0.59
VMP1-210ENST00000589823 TMEM104Q8NE00 496 aa11.36□□□□□ -0.59
VMP1-210ENST00000589823 SDSLQ96GA7 329 aa11.36□□□□□ -0.59
VMP1-210ENST00000589823 GAFA1Q96PS6 74 aa11.36□□□□□ -0.59
VMP1-210ENST00000589823 URM1Q9BTM9 101 aaKnown RBP11.36□□□□□ -0.59
VMP1-210ENST00000589823 KCNK15Q9H427 330 aa11.36□□□□□ -0.59
VMP1-210ENST00000589823 FBLN5Q9UBX5 448 aa11.36□□□□□ -0.59
VMP1-210ENST00000589823 A0A0B4J203 849 aa11.35□□□□□ -0.59
VMP1-210ENST00000589823 H3BUI4 141 aa11.35□□□□□ -0.59
VMP1-210ENST00000589823 GEMIN2O14893 280 aaKnown RBP11.35□□□□□ -0.59
VMP1-210ENST00000589823 OR7C1O76099 320 aaPredicted RBP11.35□□□□□ -0.59
VMP1-210ENST00000589823 OR2H2O95918 312 aa11.35□□□□□ -0.59
VMP1-210ENST00000589823 SNRPBP14678 240 aaKnown RBP11.35□□□□□ -0.59
VMP1-210ENST00000589823 AMY2BP19961 511 aa11.35□□□□□ -0.59
VMP1-210ENST00000589823 GABRR1P24046 479 aa11.35□□□□□ -0.59
VMP1-210ENST00000589823 SOX6P35712 828 aa11.35□□□□□ -0.59
VMP1-210ENST00000589823 PITPNBP48739 271 aa11.35□□□□□ -0.59
VMP1-210ENST00000589823 GNB2P62879 340 aa11.35□□□□□ -0.59
VMP1-210ENST00000589823 QRFPP83859 136 aa11.35□□□□□ -0.59
VMP1-210ENST00000589823 UNC119Q13432 240 aa11.35□□□□□ -0.59
VMP1-210ENST00000589823 FAM189A2Q15884 450 aa11.35□□□□□ -0.59
VMP1-210ENST00000589823 MPV17LQ2QL34 196 aa11.35□□□□□ -0.59
VMP1-210ENST00000589823 LRRC10Q5BKY1 277 aa11.35□□□□□ -0.59
VMP1-210ENST00000589823 SPNS3Q6ZMD2 512 aa11.35□□□□□ -0.59
VMP1-210ENST00000589823 ASCC1Q8N9N2 400 aaKnown RBP11.35□□□□□ -0.59
VMP1-210ENST00000589823 CHST4Q8NCG5 386 aa11.35□□□□□ -0.59
VMP1-210ENST00000589823 TMEM185AQ8NFB2 350 aa11.35□□□□□ -0.59
VMP1-210ENST00000589823 POM121Q96HA1 1249 aa11.35□□□□□ -0.59
VMP1-210ENST00000589823 SNX22Q96L94 193 aa11.35□□□□□ -0.59
VMP1-210ENST00000589823 Q96M66 194 aa11.35□□□□□ -0.59
VMP1-210ENST00000589823 ABRACLQ9P1F3 81 aa11.35□□□□□ -0.59
VMP1-210ENST00000589823 CTSZQ9UBR2 303 aa11.35□□□□□ -0.59
VMP1-210ENST00000589823 CLN8Q9UBY8 286 aa11.35□□□□□ -0.59
VMP1-210ENST00000589823 OR5V1Q9UGF6 321 aa11.35□□□□□ -0.59
VMP1-210ENST00000589823 RAB22AQ9UL26 194 aa11.35□□□□□ -0.59
VMP1-210ENST00000589823 TMEM272A0A1B0GTI8 110 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 FAM90A10PA6NDY2 464 aa11.34□□□□□ -0.59
VMP1-210ENST00000589823 FAM90A18PA6NE21 464 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms