RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 LRRC3CA6NJW4 275 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 ZNF587BE7ETH6 402 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 K7EPK0 472 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 SPRY1O43609 319 aaPredicted RBP6.41□□□□□ -1.38
ZNF540-206ENST00000589117 ANGPTL7O43827 346 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 PDCD6O75340 191 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 JTBO76095 146 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 PLATP00750 562 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 RFPL3SP0C7P2 107 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 FUT3P21217 361 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 FAM3AP98173 230 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 Q0VFX4 171 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 KRTAP27-1Q3LI81 207 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 C3orf36Q3SXR2 165 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 CRIP3Q6Q6R5 217 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 DBX2Q6ZNG2 339 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 SVBPQ8N300 66 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 PRR18Q8N4B5 295 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 FAM71E2Q8N5Q1 922 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 CCDC71LQ8N9Z2 235 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 POC1AQ8NBT0 407 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 MAFIPQ8WZ33 124 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 PIGCQ92535 297 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 MEGF10Q96KG7 1140 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 HIST1H2AAQ96QV6 131 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 C1QTNF5Q9BXJ0 243 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 WNT5BQ9H1J7 359 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 PLEKHA2Q9HB19 425 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 ACKR4Q9NPB9 350 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 C12orf4Q9NQ89 552 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 TNRC6BQ9UPQ9 1833 aaKnown RBP6.41□□□□□ -1.38
ZNF540-206ENST00000589117 hCG_38984A0A1B0GV85 526 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 LOC105371267A0A1B0GV96 52 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 FAM90A10PA6NDY2 464 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 FAM90A18PA6NE21 464 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 FAM90A16PA6NEW6 464 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 FAM90A20PA6NIJ5 464 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 FAM90A8PA6NJQ4 464 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 FAM90A7PA6NKC0 464 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 FAM90A27PA6NNH2 459 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 FAM90A22PA8MWA6 464 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 FAM90A12PA8MX19 464 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 FAM90A5PA8MXJ8 464 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 FAM90A23PA8MXZ1 464 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 H3BS24 57 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 FGF16O43320 207 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 FCGR3AP08637 254 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 FAM90A15PP0C7V4 464 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 FAM90A13PP0C7W8 464 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 FAM90A14PP0C7W9 464 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 FAM90A24PP0C7X0 464 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 COX5BP10606 129 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 CHATP28329 748 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 PIGPP57054 158 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 HERV-K104P61576 105 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 BLOC1S1P78537 153 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 SRPXP78539 464 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 PLP2Q04941 152 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 RAB32Q13637 225 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 TFAP2EQ6VUC0 442 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 IL34Q6ZMJ4 242 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 GLRX5Q86SX6 157 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 RTN4RL2Q86UN3 420 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 MCEMP1Q8IX19 187 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 SKA3Q8IX90 412 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 SLC38A6Q8IZM9 456 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 FBXL14Q8N1E6 418 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 OR2M7Q8NG81 312 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 SPSB4Q96A44 273 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 OR10C1Q96KK4 312 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 OPA3Q9H6K4 179 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 ZNF442Q9H7R0 627 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 BARX1Q9HBU1 254 aaPredicted RBP6.41□□□□□ -1.38
ZNF540-206ENST00000589117 TMEM100Q9NV29 134 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 ASF1BQ9NVP2 202 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 AK3Q9UIJ7 227 aa6.41□□□□□ -1.38
ZNF540-206ENST00000589117 A0A0G2JMM0 328 aa6.4□□□□□ -1.38
ZNF540-206ENST00000589117 A0A1W2PPB8 328 aa6.4□□□□□ -1.38
ZNF540-206ENST00000589117 A0A1W2PRS3 328 aa6.4□□□□□ -1.38
ZNF540-206ENST00000589117 ZNF705EA8MWA4 302 aaPredicted RBP6.4□□□□□ -1.38
ZNF540-206ENST00000589117 KIR3DP1A8MWS1 328 aa6.4□□□□□ -1.38
ZNF540-206ENST00000589117 C22orf46C9J442 243 aa6.4□□□□□ -1.38
ZNF540-206ENST00000589117 CST4P01036 141 aa6.4□□□□□ -1.38
ZNF540-206ENST00000589117 RPS2P15880 293 aaKnown RBP6.4□□□□□ -1.38
ZNF540-206ENST00000589117 ANOS1P23352 680 aa6.4□□□□□ -1.38
ZNF540-206ENST00000589117 RPL12P30050 165 aaKnown RBP6.4□□□□□ -1.38
ZNF540-206ENST00000589117 ARR3P36575 388 aa6.4□□□□□ -1.38
ZNF540-206ENST00000589117 MPLP40238 635 aa6.4□□□□□ -1.38
ZNF540-206ENST00000589117 UCP3P55916 312 aa6.4□□□□□ -1.38
ZNF540-206ENST00000589117 ZNF92Q03936 586 aa6.4□□□□□ -1.38
ZNF540-206ENST00000589117 PABPC1L2AQ5JQF8 200 aa6.4□□□□□ -1.38
ZNF540-206ENST00000589117 SPINK14Q6IE38 97 aa6.4□□□□□ -1.38
ZNF540-206ENST00000589117 TIPARPQ7Z3E1 657 aaKnown RBP6.4□□□□□ -1.38
ZNF540-206ENST00000589117 DPPA2Q7Z7J5 298 aa6.4□□□□□ -1.38
ZNF540-206ENST00000589117 SAXO1Q8IYX7 474 aa6.4□□□□□ -1.38
ZNF540-206ENST00000589117 FAM185AQ8N0U4 392 aa6.4□□□□□ -1.38
ZNF540-206ENST00000589117 BPIFCQ8NFQ6 507 aa6.4□□□□□ -1.38
ZNF540-206ENST00000589117 OR10AD1Q8NGE0 317 aa6.4□□□□□ -1.38
ZNF540-206ENST00000589117 OR5T2Q8NGG2 359 aa6.4□□□□□ -1.38
ZNF540-206ENST00000589117 ABHD3Q8WU67 409 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms