RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 SPARTQ8N0X7 666 aa16.69■□□□□ 0.26
DDX39A-207ENST00000588542 TMEM185AQ8NFB2 350 aa16.69■□□□□ 0.26
DDX39A-207ENST00000588542 PXT1Q8NFP0 134 aa16.69■□□□□ 0.26
DDX39A-207ENST00000588542 C8orf46Q8TAG6 207 aa16.69■□□□□ 0.26
DDX39A-207ENST00000588542 THRSPQ92748 146 aa16.69■□□□□ 0.26
DDX39A-207ENST00000588542 CPNE2Q96FN4 548 aaPredicted RBP16.69■□□□□ 0.26
DDX39A-207ENST00000588542 GPER1Q99527 375 aa16.69■□□□□ 0.26
DDX39A-207ENST00000588542 SEBOXQ9HB31 216 aaPredicted RBP16.69■□□□□ 0.26
DDX39A-207ENST00000588542 ELL3Q9HB65 397 aaPredicted RBP16.69■□□□□ 0.26
DDX39A-207ENST00000588542 RHOFQ9HBH0 211 aa16.69■□□□□ 0.26
DDX39A-207ENST00000588542 CKLFQ9UBR5 152 aa16.69■□□□□ 0.26
DDX39A-207ENST00000588542 LRRC42Q9Y546 428 aa16.69■□□□□ 0.26
DDX39A-207ENST00000588542 LIPFP07098 398 aa16.68■□□□□ 0.26
DDX39A-207ENST00000588542 PPIAL4GP0DN37 164 aa16.68■□□□□ 0.26
DDX39A-207ENST00000588542 NDUFB7P17568 137 aa16.68■□□□□ 0.26
DDX39A-207ENST00000588542 MAPK3P27361 379 aaPredicted RBP16.68■□□□□ 0.26
DDX39A-207ENST00000588542 DUSP1P28562 367 aa16.68■□□□□ 0.26
DDX39A-207ENST00000588542 ZNF93P35789 620 aaPredicted RBP16.68■□□□□ 0.26
DDX39A-207ENST00000588542 OR3A4PP47883 348 aa16.68■□□□□ 0.26
DDX39A-207ENST00000588542 FGF12P61328 243 aa16.68■□□□□ 0.26
DDX39A-207ENST00000588542 RPS25P62851 125 aaKnown RBP16.68■□□□□ 0.26
DDX39A-207ENST00000588542 COL10A1Q03692 680 aa16.68■□□□□ 0.26
DDX39A-207ENST00000588542 PNLDC1Q8NA58 520 aaKnown RBP16.68■□□□□ 0.26
DDX39A-207ENST00000588542 TNFAIP8L1Q8WVP5 186 aa16.68■□□□□ 0.26
DDX39A-207ENST00000588542 H1FXQ92522 213 aaKnown RBP16.68■□□□□ 0.26
DDX39A-207ENST00000588542 TMEM203Q969S6 136 aa16.68■□□□□ 0.26
DDX39A-207ENST00000588542 PPIL3Q9H2H8 161 aaKnown RBP16.68■□□□□ 0.26
DDX39A-207ENST00000588542 ZNF737O75373 536 aa16.67■□□□□ 0.26
DDX39A-207ENST00000588542 HAND1O96004 215 aa16.67■□□□□ 0.26
DDX39A-207ENST00000588542 TK1P04183 234 aa16.67■□□□□ 0.26
DDX39A-207ENST00000588542 CHRM2P08172 466 aa16.67■□□□□ 0.26
DDX39A-207ENST00000588542 MMP9P14780 707 aa16.67■□□□□ 0.26
DDX39A-207ENST00000588542 PTGFRP43088 359 aa16.67■□□□□ 0.26
DDX39A-207ENST00000588542 SNU13P55769 128 aaKnown RBP16.67■□□□□ 0.26
DDX39A-207ENST00000588542 SSX1Q16384 188 aa16.67■□□□□ 0.26
DDX39A-207ENST00000588542 TMEM91Q6ZNR0 172 aa16.67■□□□□ 0.26
DDX39A-207ENST00000588542 LYPD6Q86Y78 171 aa16.67■□□□□ 0.26
DDX39A-207ENST00000588542 SVOPQ8N4V2 548 aa16.67■□□□□ 0.26
DDX39A-207ENST00000588542 TEX29Q8N6K0 151 aa16.67■□□□□ 0.26
DDX39A-207ENST00000588542 NANPQ8TBE9 248 aa16.67■□□□□ 0.26
DDX39A-207ENST00000588542 UPRTQ96BW1 309 aa16.67■□□□□ 0.26
DDX39A-207ENST00000588542 CNTD2Q9H8S5 307 aa16.67■□□□□ 0.26
DDX39A-207ENST00000588542 TMEM82A0PJX8 343 aa16.66■□□□□ 0.26
DDX39A-207ENST00000588542 K7N7A8 449 aa16.66■□□□□ 0.26
DDX39A-207ENST00000588542 MAS1P04201 325 aa16.66■□□□□ 0.26
DDX39A-207ENST00000588542 CAPZA1P52907 286 aa16.66■□□□□ 0.26
DDX39A-207ENST00000588542 ARMCX4Q5H9R4 360 aa16.66■□□□□ 0.26
DDX39A-207ENST00000588542 SPIN3Q5JUX0 258 aa16.66■□□□□ 0.26
DDX39A-207ENST00000588542 UBE2UQ5VVX9 321 aa16.66■□□□□ 0.26
DDX39A-207ENST00000588542 ELP2Q6IA86 826 aa16.66■□□□□ 0.26
DDX39A-207ENST00000588542 FIP1L1Q6UN15 594 aaKnown RBP16.66■□□□□ 0.26
DDX39A-207ENST00000588542 CEACAM19Q7Z692 300 aa16.66■□□□□ 0.26
DDX39A-207ENST00000588542 Q8NFD4 153 aa16.66■□□□□ 0.26
DDX39A-207ENST00000588542 DMRTB1Q96MA1 342 aa16.66■□□□□ 0.26
DDX39A-207ENST00000588542 FAM234AQ9H0X4 552 aa16.66■□□□□ 0.26
DDX39A-207ENST00000588542 SIRPDQ9H106 197 aa16.66■□□□□ 0.26
DDX39A-207ENST00000588542 GSTK1Q9Y2Q3 226 aa16.66■□□□□ 0.26
DDX39A-207ENST00000588542 CDRT1O95170 752 aa16.65■□□□□ 0.26
DDX39A-207ENST00000588542 UCHL1P09936 223 aa16.65■□□□□ 0.26
DDX39A-207ENST00000588542 ARF6P62330 175 aa16.65■□□□□ 0.26
DDX39A-207ENST00000588542 TRAM1Q15629 374 aa16.65■□□□□ 0.26
DDX39A-207ENST00000588542 KCTD21Q4G0X4 260 aa16.65■□□□□ 0.26
DDX39A-207ENST00000588542 ZNF773Q6PK81 442 aa16.65■□□□□ 0.26
DDX39A-207ENST00000588542 C17orf107Q6ZR85 190 aa16.65■□□□□ 0.26
DDX39A-207ENST00000588542 LRRTM1Q86UE6 522 aa16.65■□□□□ 0.26
DDX39A-207ENST00000588542 CDH26Q8IXH8 852 aa16.65■□□□□ 0.26
DDX39A-207ENST00000588542 ASCC1Q8N9N2 400 aaKnown RBP16.65■□□□□ 0.26
DDX39A-207ENST00000588542 OR10K1Q8NGX5 313 aa16.65■□□□□ 0.26
DDX39A-207ENST00000588542 WDFY2Q96P53 400 aa16.65■□□□□ 0.26
DDX39A-207ENST00000588542 TBX15Q96SF7 602 aa16.65■□□□□ 0.26
DDX39A-207ENST00000588542 FAM192AQ9GZU8 254 aa16.65■□□□□ 0.26
DDX39A-207ENST00000588542 PSPNO60542 156 aa16.64■□□□□ 0.25
DDX39A-207ENST00000588542 IGHV4-38-2P0DP08 117 aa16.64■□□□□ 0.25
DDX39A-207ENST00000588542 GABRA5P31644 462 aa16.64■□□□□ 0.25
DDX39A-207ENST00000588542 MTNR1BP49286 362 aa16.64■□□□□ 0.25
DDX39A-207ENST00000588542 FABP5Q01469 135 aa16.64■□□□□ 0.25
DDX39A-207ENST00000588542 Q6P435 159 aa16.64■□□□□ 0.25
DDX39A-207ENST00000588542 SNX22Q96L94 193 aa16.64■□□□□ 0.25
DDX39A-207ENST00000588542 C19orf12Q9NSK7 152 aa16.64■□□□□ 0.25
DDX39A-207ENST00000588542 IL36GQ9NZH8 169 aa16.64■□□□□ 0.25
DDX39A-207ENST00000588542 ING4Q9UNL4 249 aa16.64■□□□□ 0.25
DDX39A-207ENST00000588542 KPTNQ9Y664 436 aa16.64■□□□□ 0.25
DDX39A-207ENST00000588542 TRBV23-1A0A0A0MS06 115 aa16.63■□□□□ 0.25
DDX39A-207ENST00000588542 SH2D1BO14796 132 aa16.63■□□□□ 0.25
DDX39A-207ENST00000588542 RGS9O75916 674 aaPredicted RBP16.63■□□□□ 0.25
DDX39A-207ENST00000588542 TOX4O94842 621 aa16.63■□□□□ 0.25
DDX39A-207ENST00000588542 OR2H2O95918 312 aa16.63■□□□□ 0.25
DDX39A-207ENST00000588542 SRMP19623 302 aa16.63■□□□□ 0.25
DDX39A-207ENST00000588542 EPHA1P21709 976 aa16.63■□□□□ 0.25
DDX39A-207ENST00000588542 PSMA1P25786 263 aaKnown RBP16.63■□□□□ 0.25
DDX39A-207ENST00000588542 RSU1Q15404 277 aa16.63■□□□□ 0.25
DDX39A-207ENST00000588542 HSD17B12Q53GQ0 312 aa16.63■□□□□ 0.25
DDX39A-207ENST00000588542 OR8H2Q8N162 312 aa16.63■□□□□ 0.25
DDX39A-207ENST00000588542 JAGN1Q8N5M9 183 aa16.63■□□□□ 0.25
DDX39A-207ENST00000588542 KIR3DL3Q8N743 410 aa16.63■□□□□ 0.25
DDX39A-207ENST00000588542 Q8N7P7 452 aa16.63■□□□□ 0.25
DDX39A-207ENST00000588542 OR51T1Q8NGJ9 327 aa16.63■□□□□ 0.25
DDX39A-207ENST00000588542 PHYHIPQ92561 330 aa16.63■□□□□ 0.25
DDX39A-207ENST00000588542 MUL1Q969V5 352 aa16.63■□□□□ 0.25
DDX39A-207ENST00000588542 PCGF1Q9BSM1 259 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms