RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 OR10G2Q8NGC3 310 aa12.07□□□□□ -0.48
IFT20-216ENST00000588477 OR14K1Q8NGZ2 314 aa12.07□□□□□ -0.48
IFT20-216ENST00000588477 OR2T29Q8NH02 315 aa12.07□□□□□ -0.48
IFT20-216ENST00000588477 CHPT1Q8WUD6 406 aa12.07□□□□□ -0.48
IFT20-216ENST00000588477 CADM1Q9BY67 442 aaKnown RBP12.07□□□□□ -0.48
IFT20-216ENST00000588477 YIPF3Q9GZM5 350 aa12.07□□□□□ -0.48
IFT20-216ENST00000588477 UBE2J1Q9Y385 318 aaPredicted RBP12.07□□□□□ -0.48
IFT20-216ENST00000588477 MOB4Q9Y3A3 225 aa12.07□□□□□ -0.48
IFT20-216ENST00000588477 HSPE1-MOB4S4R3N1 261 aa12.07□□□□□ -0.48
IFT20-216ENST00000588477 BIRC6Q9NR09 4857 aa12.07□□□□□ -0.48
IFT20-216ENST00000588477 SACSQ9NZJ4 4579 aa12.06□□□□□ -0.48
IFT20-216ENST00000588477 PSPNO60542 156 aa12.06□□□□□ -0.48
IFT20-216ENST00000588477 SASH3O75995 380 aa12.06□□□□□ -0.48
IFT20-216ENST00000588477 SLC2A5P22732 501 aa12.06□□□□□ -0.48
IFT20-216ENST00000588477 CDK2P24941 298 aa12.06□□□□□ -0.48
IFT20-216ENST00000588477 CEACAM3P40198 252 aa12.06□□□□□ -0.48
IFT20-216ENST00000588477 ECI1P42126 302 aa12.06□□□□□ -0.48
IFT20-216ENST00000588477 GP2P55259 537 aaKnown RBP12.06□□□□□ -0.48
IFT20-216ENST00000588477 APOFQ13790 326 aa12.06□□□□□ -0.48
IFT20-216ENST00000588477 TPTE2P1Q5T6R2 138 aa12.06□□□□□ -0.48
IFT20-216ENST00000588477 ZNF695Q8IW36 515 aa12.06□□□□□ -0.48
IFT20-216ENST00000588477 PGAM4Q8N0Y7 254 aa12.06□□□□□ -0.48
IFT20-216ENST00000588477 Q8NFD4 153 aa12.06□□□□□ -0.48
IFT20-216ENST00000588477 EMG1Q92979 244 aaKnown RBP12.06□□□□□ -0.48
IFT20-216ENST00000588477 RAX2Q96IS3 184 aa12.06□□□□□ -0.48
IFT20-216ENST00000588477 FEVQ99581 238 aa12.06□□□□□ -0.48
IFT20-216ENST00000588477 CCDC134Q9H6E4 229 aa12.06□□□□□ -0.48
IFT20-216ENST00000588477 ZNF286AQ9HBT8 521 aa12.06□□□□□ -0.48
IFT20-216ENST00000588477 IL36RNQ9UBH0 155 aa12.06□□□□□ -0.48
IFT20-216ENST00000588477 IKZF2Q9UKS7 526 aa12.06□□□□□ -0.48
IFT20-216ENST00000588477 COPS3Q9UNS2 423 aa12.06□□□□□ -0.48
IFT20-216ENST00000588477 SLC7A11Q9UPY5 501 aa12.06□□□□□ -0.48
IFT20-216ENST00000588477 SORL1Q92673 2214 aa12.05□□□□□ -0.48
IFT20-216ENST00000588477 HUWE1Q7Z6Z7 4374 aaKnown RBP12.05□□□□□ -0.48
IFT20-216ENST00000588477 IGKV1-27A0A075B6S5 117 aa12.05□□□□□ -0.48
IFT20-216ENST00000588477 A0A1B0GTI1 187 aa12.05□□□□□ -0.48
IFT20-216ENST00000588477 SERPINE3A8MV23 424 aa12.05□□□□□ -0.48
IFT20-216ENST00000588477 LOC110117498-PIK3R3F6TDL0 507 aa12.05□□□□□ -0.48
IFT20-216ENST00000588477 BUB1B-PAK6H3BSN5 160 aa12.05□□□□□ -0.48
IFT20-216ENST00000588477 CCL24O00175 119 aa12.05□□□□□ -0.48
IFT20-216ENST00000588477 TOR1AO14656 332 aa12.05□□□□□ -0.48
IFT20-216ENST00000588477 MGST3O14880 152 aa12.05□□□□□ -0.48
IFT20-216ENST00000588477 SRSF10O75494 262 aaKnown RBP12.05□□□□□ -0.48
IFT20-216ENST00000588477 ATP6V1B2P21281 511 aa12.05□□□□□ -0.48
IFT20-216ENST00000588477 CHATP28329 748 aa12.05□□□□□ -0.48
IFT20-216ENST00000588477 DUSP1P28562 367 aa12.05□□□□□ -0.48
IFT20-216ENST00000588477 GDNFP39905 211 aa12.05□□□□□ -0.48
IFT20-216ENST00000588477 MNDAP41218 407 aa12.05□□□□□ -0.48
IFT20-216ENST00000588477 ROM1Q03395 351 aa12.05□□□□□ -0.48
IFT20-216ENST00000588477 HLA-DRB5Q30154 266 aa12.05□□□□□ -0.48
IFT20-216ENST00000588477 C9orf66Q5T8R8 295 aa12.05□□□□□ -0.48
IFT20-216ENST00000588477 GAL3ST2Q9H3Q3 398 aa12.05□□□□□ -0.48
IFT20-216ENST00000588477 LCE6AA0A183 80 aa12.04□□□□□ -0.48
IFT20-216ENST00000588477 LY6LH3BQJ8 138 aa12.04□□□□□ -0.48
IFT20-216ENST00000588477 HMGN1P05114 100 aa12.04□□□□□ -0.48
IFT20-216ENST00000588477 FAM106CPP0CH98 169 aa12.04□□□□□ -0.48
IFT20-216ENST00000588477 CALCBP10092 127 aa12.04□□□□□ -0.48
IFT20-216ENST00000588477 ERP29P30040 261 aaKnown RBP12.04□□□□□ -0.48
IFT20-216ENST00000588477 SNU13P55769 128 aaKnown RBP12.04□□□□□ -0.48
IFT20-216ENST00000588477 SLC35B1P78383 322 aa12.04□□□□□ -0.48
IFT20-216ENST00000588477 ZNF91Q05481 1191 aa12.04□□□□□ -0.48
IFT20-216ENST00000588477 RBM39Q14498 530 aaKnown RBP12.04□□□□□ -0.48
IFT20-216ENST00000588477 BCL2L15Q5TBC7 163 aa12.04□□□□□ -0.48
IFT20-216ENST00000588477 HEPN1Q6WQI6 88 aa12.04□□□□□ -0.48
IFT20-216ENST00000588477 SLC25A26Q70HW3 274 aa12.04□□□□□ -0.48
IFT20-216ENST00000588477 ELMOD2Q8IZ81 293 aa12.04□□□□□ -0.48
IFT20-216ENST00000588477 OR5M8Q8NGP6 311 aa12.04□□□□□ -0.48
IFT20-216ENST00000588477 GIPC3Q8TF64 312 aa12.04□□□□□ -0.48
IFT20-216ENST00000588477 CREB3L1Q96BA8 519 aa12.04□□□□□ -0.48
IFT20-216ENST00000588477 RCHY1Q96PM5 261 aa12.04□□□□□ -0.48
IFT20-216ENST00000588477 GLS2Q9UI32 602 aa12.04□□□□□ -0.48
IFT20-216ENST00000588477 OR52A1Q9UKL2 312 aa12.04□□□□□ -0.48
IFT20-216ENST00000588477 TRGV10A0A0A0MS01 117 aa12.03□□□□□ -0.48
IFT20-216ENST00000588477 TCRBV5S2A0A599 114 aa12.03□□□□□ -0.48
IFT20-216ENST00000588477 H3BSH0 61 aa12.03□□□□□ -0.48
IFT20-216ENST00000588477 MAGEB4O15481 346 aaPredicted RBP12.03□□□□□ -0.48
IFT20-216ENST00000588477 LYL1P12980 280 aa12.03□□□□□ -0.48
IFT20-216ENST00000588477 OR3A1P47881 315 aa12.03□□□□□ -0.48
IFT20-216ENST00000588477 PRRX1P54821 245 aa12.03□□□□□ -0.48
IFT20-216ENST00000588477 P2RX3P56373 397 aa12.03□□□□□ -0.48
IFT20-216ENST00000588477 CDK5Q00535 292 aa12.03□□□□□ -0.48
IFT20-216ENST00000588477 KPNB1Q14974 876 aaKnown RBP12.03□□□□□ -0.48
IFT20-216ENST00000588477 UBE2V2Q15819 145 aa12.03□□□□□ -0.48
IFT20-216ENST00000588477 DEFB136Q30KP8 78 aa12.03□□□□□ -0.48
IFT20-216ENST00000588477 CCDC144NLQ6NUI1 221 aa12.03□□□□□ -0.48
IFT20-216ENST00000588477 PLEKHG7Q6ZR37 379 aa12.03□□□□□ -0.48
IFT20-216ENST00000588477 ENTHD1Q8IYW4 607 aa12.03□□□□□ -0.48
IFT20-216ENST00000588477 COMMD1Q8N668 190 aa12.03□□□□□ -0.48
IFT20-216ENST00000588477 C5orf56Q8N8D9 126 aa12.03□□□□□ -0.48
IFT20-216ENST00000588477 ASB17Q8WXJ9 295 aa12.03□□□□□ -0.48
IFT20-216ENST00000588477 APOL4Q9BPW4 351 aa12.03□□□□□ -0.48
IFT20-216ENST00000588477 MAGIXQ9H6Y5 334 aa12.03□□□□□ -0.48
IFT20-216ENST00000588477 DCLRE1BQ9H816 532 aa12.03□□□□□ -0.48
IFT20-216ENST00000588477 MOB1AQ9H8S9 216 aa12.03□□□□□ -0.48
IFT20-216ENST00000588477 SEBOXQ9HB31 216 aaPredicted RBP12.03□□□□□ -0.48
IFT20-216ENST00000588477 PALMDQ9NP74 551 aa12.03□□□□□ -0.48
IFT20-216ENST00000588477 RBFOX1Q9NWB1 397 aaKnown RBP12.03□□□□□ -0.48
IFT20-216ENST00000588477 ACTR3BQ9P1U1 418 aa12.03□□□□□ -0.48
IFT20-216ENST00000588477 SCOCQ9UIL1 159 aa12.03□□□□□ -0.48
IFT20-216ENST00000588477 TMEM14AQ9Y6G1 99 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms