RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 OR12D2P58182 307 aa11.57□□□□□ -0.56
VMP1-206ENST00000587945 NANOS3P60323 173 aaKnown RBP11.57□□□□□ -0.56
VMP1-206ENST00000587945 ZNF91Q05481 1191 aa11.57□□□□□ -0.56
VMP1-206ENST00000587945 MEF2CQ06413 473 aaPredicted RBP11.57□□□□□ -0.56
VMP1-206ENST00000587945 CNN3Q15417 329 aaKnown RBP11.57□□□□□ -0.56
VMP1-206ENST00000587945 C11orf88Q6PI97 169 aa11.57□□□□□ -0.56
VMP1-206ENST00000587945 RNF144BQ7Z419 303 aa11.57□□□□□ -0.56
VMP1-206ENST00000587945 FAM58AQ8N1B3 248 aa11.57□□□□□ -0.56
VMP1-206ENST00000587945 OR4S1Q8NGB4 309 aa11.57□□□□□ -0.56
VMP1-206ENST00000587945 OR10AC1Q8NH08 325 aa11.57□□□□□ -0.56
VMP1-206ENST00000587945 PP6455Q8WZ26 134 aa11.57□□□□□ -0.56
VMP1-206ENST00000587945 RFT1Q96AA3 541 aa11.57□□□□□ -0.56
VMP1-206ENST00000587945 FOXRED1Q96CU9 486 aaPredicted RBP11.57□□□□□ -0.56
VMP1-206ENST00000587945 C10orf35Q96D05 121 aa11.57□□□□□ -0.56
VMP1-206ENST00000587945 MALSU1Q96EH3 234 aa11.57□□□□□ -0.56
VMP1-206ENST00000587945 ABCB10Q9NRK6 738 aa11.57□□□□□ -0.56
VMP1-206ENST00000587945 IMPAD1Q9NX62 359 aa11.57□□□□□ -0.56
VMP1-206ENST00000587945 AASSQ9UDR5 926 aa11.57□□□□□ -0.56
VMP1-206ENST00000587945 HILPDAQ9Y5L2 63 aa11.57□□□□□ -0.56
VMP1-206ENST00000587945 TGP01266 2768 aa11.57□□□□□ -0.56
VMP1-206ENST00000587945 hADV38S2A0JD32 116 aa11.56□□□□□ -0.56
VMP1-206ENST00000587945 G3V4G9 280 aa11.56□□□□□ -0.56
VMP1-206ENST00000587945 J3QRE1 110 aa11.56□□□□□ -0.56
VMP1-206ENST00000587945 MMP23AO75900 390 aa11.56□□□□□ -0.56
VMP1-206ENST00000587945 RBP4P02753 201 aa11.56□□□□□ -0.56
VMP1-206ENST00000587945 ZNF20P17024 532 aa11.56□□□□□ -0.56
VMP1-206ENST00000587945 AZGP1P25311 298 aaKnown RBP11.56□□□□□ -0.56
VMP1-206ENST00000587945 PEX2P28328 305 aa11.56□□□□□ -0.56
VMP1-206ENST00000587945 ACTA2P62736 377 aa11.56□□□□□ -0.56
VMP1-206ENST00000587945 ACTG2P63267 376 aa11.56□□□□□ -0.56
VMP1-206ENST00000587945 ACTC1P68032 377 aa11.56□□□□□ -0.56
VMP1-206ENST00000587945 ACTA1P68133 377 aa11.56□□□□□ -0.56
VMP1-206ENST00000587945 ZIK1Q3SY52 487 aaPredicted RBP11.56□□□□□ -0.56
VMP1-206ENST00000587945 TMEM244Q5VVB8 128 aa11.56□□□□□ -0.56
VMP1-206ENST00000587945 BAIAP2L2Q6UXY1 529 aa11.56□□□□□ -0.56
VMP1-206ENST00000587945 Q6ZS46 218 aa11.56□□□□□ -0.56
VMP1-206ENST00000587945 ZNF676Q8N7Q3 588 aa11.56□□□□□ -0.56
VMP1-206ENST00000587945 DNAAF1Q8NEP3 725 aa11.56□□□□□ -0.56
VMP1-206ENST00000587945 RPS4Y2Q8TD47 263 aa11.56□□□□□ -0.56
VMP1-206ENST00000587945 SPACA5Q96QH8 159 aa11.56□□□□□ -0.56
VMP1-206ENST00000587945 OR5M11Q96RB7 305 aa11.56□□□□□ -0.56
VMP1-206ENST00000587945 SERTAD4Q9NUC0 356 aa11.56□□□□□ -0.56
VMP1-206ENST00000587945 SESN1Q9Y6P5 492 aa11.56□□□□□ -0.56
VMP1-206ENST00000587945 TRBV2A0A0J9YWF9 115 aa11.55□□□□□ -0.56
VMP1-206ENST00000587945 DAPL1A0PJW8 107 aa11.55□□□□□ -0.56
VMP1-206ENST00000587945 J3QLW9 94 aa11.55□□□□□ -0.56
VMP1-206ENST00000587945 SIRPB1O00241 398 aa11.55□□□□□ -0.56
VMP1-206ENST00000587945 EI24O14681 340 aa11.55□□□□□ -0.56
VMP1-206ENST00000587945 SLC16A6O15403 523 aa11.55□□□□□ -0.56
VMP1-206ENST00000587945 CYB5AP00167 134 aa11.55□□□□□ -0.56
VMP1-206ENST00000587945 OPN1MWP04001 364 aa11.55□□□□□ -0.56
VMP1-206ENST00000587945 ALPLP05186 524 aa11.55□□□□□ -0.56
VMP1-206ENST00000587945 OPN1MW2P0DN77 364 aa11.55□□□□□ -0.56
VMP1-206ENST00000587945 OPN1MW3P0DN78 364 aa11.55□□□□□ -0.56
VMP1-206ENST00000587945 CD28P10747 220 aa11.55□□□□□ -0.56
VMP1-206ENST00000587945 ZNF19P17023 458 aa11.55□□□□□ -0.56
VMP1-206ENST00000587945 PRKACBP22694 351 aa11.55□□□□□ -0.56
VMP1-206ENST00000587945 OR3A1P47881 315 aa11.55□□□□□ -0.56
VMP1-206ENST00000587945 PDZK1IP1Q13113 114 aa11.55□□□□□ -0.56
VMP1-206ENST00000587945 NSUN5P1Q3KNT7 163 aa11.55□□□□□ -0.56
VMP1-206ENST00000587945 UTS2BQ765I0 119 aa11.55□□□□□ -0.56
VMP1-206ENST00000587945 Q8IYB0 196 aa11.55□□□□□ -0.56
VMP1-206ENST00000587945 ENTHD1Q8IYW4 607 aa11.55□□□□□ -0.56
VMP1-206ENST00000587945 OR51A4Q8NGJ6 313 aa11.55□□□□□ -0.56
VMP1-206ENST00000587945 NDNFQ8TB73 568 aa11.55□□□□□ -0.56
VMP1-206ENST00000587945 TRUB1Q8WWH5 349 aaKnown RBP11.55□□□□□ -0.56
VMP1-206ENST00000587945 MBOAT4Q96T53 435 aa11.55□□□□□ -0.56
VMP1-206ENST00000587945 SEBOXQ9HB31 216 aaPredicted RBP11.55□□□□□ -0.56
VMP1-206ENST00000587945 GSTK1Q9Y2Q3 226 aa11.55□□□□□ -0.56
VMP1-206ENST00000587945 LINC00312Q9Y6C7 94 aa11.55□□□□□ -0.56
VMP1-206ENST00000587945 IGHV2-26A0A0B4J1V2 119 aa11.54□□□□□ -0.56
VMP1-206ENST00000587945 IGKV1-12A0A0C4DH73 117 aa11.54□□□□□ -0.56
VMP1-206ENST00000587945 IGKV1D-12P01611 117 aa11.54□□□□□ -0.56
VMP1-206ENST00000587945 HTR1AP08908 422 aa11.54□□□□□ -0.56
VMP1-206ENST00000587945 OCM2P0CE71 109 aa11.54□□□□□ -0.56
VMP1-206ENST00000587945 OCMP0CE72 109 aaPredicted RBP11.54□□□□□ -0.56
VMP1-206ENST00000587945 SNRPGP62308 76 aaKnown RBP11.54□□□□□ -0.56
VMP1-206ENST00000587945 BLCAPP62952 87 aa11.54□□□□□ -0.56
VMP1-206ENST00000587945 SLC34A1Q06495 639 aa11.54□□□□□ -0.56
VMP1-206ENST00000587945 ZNF146Q15072 292 aa11.54□□□□□ -0.56
VMP1-206ENST00000587945 FDX2Q6P4F2 183 aa11.54□□□□□ -0.56
VMP1-206ENST00000587945 LHFPL2Q6ZUX7 228 aa11.54□□□□□ -0.56
VMP1-206ENST00000587945 KCTD20Q7Z5Y7 419 aa11.54□□□□□ -0.56
VMP1-206ENST00000587945 TRAPPC6BQ86SZ2 158 aa11.54□□□□□ -0.56
VMP1-206ENST00000587945 Q8N2B8 174 aa11.54□□□□□ -0.56
VMP1-206ENST00000587945 OR5D18Q8NGL1 313 aa11.54□□□□□ -0.56
VMP1-206ENST00000587945 OR13C9Q8NGT0 318 aa11.54□□□□□ -0.56
VMP1-206ENST00000587945 HRASLS5Q96KN8 279 aa11.54□□□□□ -0.56
VMP1-206ENST00000587945 C4orf36Q96KX1 117 aa11.54□□□□□ -0.56
VMP1-206ENST00000587945 OPALINQ96PE5 141 aa11.54□□□□□ -0.56
VMP1-206ENST00000587945 CDCA4Q9BXL8 241 aa11.54□□□□□ -0.56
VMP1-206ENST00000587945 TMEM133Q9H2Q1 129 aa11.54□□□□□ -0.56
VMP1-206ENST00000587945 HMG20AQ9NP66 347 aa11.54□□□□□ -0.56
VMP1-206ENST00000587945 E9PQ18 207 aa11.53□□□□□ -0.56
VMP1-206ENST00000587945 H3BNX3 289 aa11.53□□□□□ -0.56
VMP1-206ENST00000587945 F2RL2O00254 374 aa11.53□□□□□ -0.56
VMP1-206ENST00000587945 MGST3O14880 152 aa11.53□□□□□ -0.56
VMP1-206ENST00000587945 FBXO24O75426 580 aa11.53□□□□□ -0.56
VMP1-206ENST00000587945 OR2H2O95918 312 aa11.53□□□□□ -0.56
VMP1-206ENST00000587945 PRB2P02812 416 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms