RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.08□□□□□ -1.28
NEDD4L-218ENST00000587547 PNLDC1Q8NA58 520 aaKnown RBP7.08□□□□□ -1.28
NEDD4L-218ENST00000587547 NDNFQ8TB73 568 aa7.08□□□□□ -1.28
NEDD4L-218ENST00000587547 RAB2BQ8WUD1 216 aa7.08□□□□□ -1.28
NEDD4L-218ENST00000587547 LRRC29Q8WV35 223 aa7.08□□□□□ -1.28
NEDD4L-218ENST00000587547 TNFAIP8L1Q8WVP5 186 aa7.08□□□□□ -1.28
NEDD4L-218ENST00000587547 CCL17Q92583 94 aa7.08□□□□□ -1.28
NEDD4L-218ENST00000587547 YIPF5Q969M3 257 aa7.08□□□□□ -1.28
NEDD4L-218ENST00000587547 SLAMF9Q96A28 289 aa7.08□□□□□ -1.28
NEDD4L-218ENST00000587547 ISOC1Q96CN7 298 aa7.08□□□□□ -1.28
NEDD4L-218ENST00000587547 CPNE2Q96FN4 548 aaPredicted RBP7.08□□□□□ -1.28
NEDD4L-218ENST00000587547 ZNF488Q96MN9 340 aa7.08□□□□□ -1.28
NEDD4L-218ENST00000587547 GFI1Q99684 422 aa7.08□□□□□ -1.28
NEDD4L-218ENST00000587547 METTL17Q9H7H0 456 aaPredicted RBP7.08□□□□□ -1.28
NEDD4L-218ENST00000587547 ELL3Q9HB65 397 aaPredicted RBP7.08□□□□□ -1.28
NEDD4L-218ENST00000587547 PLGRKTQ9HBL7 147 aa7.08□□□□□ -1.28
NEDD4L-218ENST00000587547 GCM1Q9NP62 436 aa7.08□□□□□ -1.28
NEDD4L-218ENST00000587547 ING4Q9UNL4 249 aa7.08□□□□□ -1.28
NEDD4L-218ENST00000587547 CEPT1Q9Y6K0 416 aa7.08□□□□□ -1.28
NEDD4L-218ENST00000587547 PRKDCP78527 4128 aaKnown RBP7.08□□□□□ -1.28
NEDD4L-218ENST00000587547 AKR7A2O43488 359 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 CYB5AP00167 134 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 CALCBP10092 127 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 CD80P33681 288 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 PSMD7P51665 324 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 TMBIM6P55061 237 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 SNU13P55769 128 aaKnown RBP7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 CLDN12P56749 244 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 HOXA4Q00056 320 aaPredicted RBP7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 PDZK1IP1Q13113 114 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 RAB11BQ15907 218 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 HFEQ30201 348 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 FAM201AQ5SY85 155 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 HIST2H2BDQ6DRA6 164 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 AWAT2Q6E213 333 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 CRIP3Q6Q6R5 217 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 WDR82Q6UXN9 313 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 USP43Q70EL4 1123 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 TPRA1Q86W33 373 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 MKXQ8IYA7 352 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 ZNF525Q8N782 197 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 C19orf18Q8NEA5 215 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 OR10K1Q8NGX5 313 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 OR51F2Q8NH61 342 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 ZNF671Q8TAW3 534 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 AQP3Q92482 292 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 RDH5Q92781 318 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 C12orf43Q96C57 262 aaKnown RBP7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 S100A13Q99584 98 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 PKIBQ9C010 78 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 TLNRD1Q9H1K6 362 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 DCSTAMPQ9H295 470 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 CDIP1Q9H305 208 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 CNTD2Q9H8S5 307 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 BARX1Q9HBU1 254 aaPredicted RBP7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 TMEM106BQ9NUM4 274 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 RNF7Q9UBF6 113 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 MRPS28Q9Y2Q9 187 aaKnown RBP7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 V9GY05 133 aa7.07□□□□□ -1.28
NEDD4L-218ENST00000587547 IGHV3OR15-7A0A075B7D8 119 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 A0A0B4J203 849 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 SMIM31A0A1B0GVY4 71 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 LRRC30A6NM36 301 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 H3BMQ9 156 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 TRAPPC2LH3BP13 241 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 WNT9BO14905 357 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 SLC22A1O15245 554 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 PPIHO43447 177 aaKnown RBP7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 PTBP3O95758 552 aaKnown RBP7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 SLC2A2P11168 524 aaPredicted RBP7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 BCL3P20749 454 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 SERPINA2P20848 420 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 GLRA1P23415 457 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 MPZP25189 248 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 HTR2CP28335 458 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 RPS19P39019 145 aaKnown RBP7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 PTGFRP43088 359 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 PDLIM4P50479 330 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 ZP1P60852 638 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 DEFA6Q01524 100 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 IL24Q13007 206 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 SPCS2Q15005 226 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 RSU1Q15404 277 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 SLC22A6Q4U2R8 563 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 FAM76BQ5HYJ3 339 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 AVPI1Q5T686 147 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 IDNKQ5T6J7 187 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 GLIPR1L1Q6UWM5 242 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 C1QL2Q7Z5L3 287 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 NR2C2APQ86WQ0 139 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 DEFB108BQ8NET1 73 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 OR4D6Q8NGJ1 314 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 OR10Z1Q8NGY1 313 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 SGMS2Q8NHU3 365 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 Q8TCH9 128 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 ERGIC1Q969X5 290 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 FOXRED1Q96CU9 486 aaPredicted RBP7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 CEP19Q96LK0 163 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 BCL7BQ9BQE9 202 aa7.06□□□□□ -1.28
NEDD4L-218ENST00000587547 RBM38Q9H0Z9 239 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms