RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 PRAF2O60831 178 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 CYB5AP00167 134 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 NRASP01111 189 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 HLA-HP01893 362 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 CD3GP09693 182 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 SELEP16581 610 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 FAHP16930 419 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 PTGFRP43088 359 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 CBX5P45973 191 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 RFX2P48378 723 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 IDH3GP51553 393 aaPredicted RBP6.63□□□□□ -1.35
VMP1-204ENST00000587259 ATP1B3P54709 279 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 RAB25P57735 213 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 TAS2R19P59542 299 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 FAM3AP98173 230 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 KLF9Q13886 244 aaPredicted RBP6.63□□□□□ -1.35
VMP1-204ENST00000587259 MEF2DQ14814 521 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 PNLIPRP3Q17RR3 467 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 RSPO1Q2MKA7 263 aaPredicted RBP6.63□□□□□ -1.35
VMP1-204ENST00000587259 C3orf36Q3SXR2 165 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 RSBN1Q5VWQ0 802 aaPredicted RBP6.63□□□□□ -1.35
VMP1-204ENST00000587259 TMEM42Q69YG0 159 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 GLIPR1L1Q6UWM5 242 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 AKAP14Q86UN6 197 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 LINC01356Q8N9X3 169 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 ZSCAN4Q8NAM6 433 aaPredicted RBP6.63□□□□□ -1.35
VMP1-204ENST00000587259 SLC30A7Q8NEW0 376 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 OR4D6Q8NGJ1 314 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 OR56B4Q8NH76 319 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 SLC7A6Q92536 515 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 POM121L2Q96KW2 1035 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 MARVELD1Q9BSK0 173 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 RHOFQ9HBH0 211 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 CDH20Q9HBT6 801 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.63□□□□□ -1.35
VMP1-204ENST00000587259 IL36GQ9NZH8 169 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 FZR1Q9UM11 496 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 RHBDD3Q9Y3P4 386 aa6.63□□□□□ -1.35
VMP1-204ENST00000587259 TRAV18A0A075B6X5 111 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 LINC00854A0A1B0GVQ3 168 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 OR5B21A6NL26 309 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 ANKRD30BLA7E2S9 258 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 SERPINE3A8MV23 424 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 B9A039 149 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 GMDSO60547 372 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 CDC14BO60729 498 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 CA11O75493 328 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 CST4P01036 141 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 CRYAAP02489 173 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 CSTBP04080 98 aaKnown RBP6.62□□□□□ -1.35
VMP1-204ENST00000587259 AKAIN1P0CW23 69 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 NAT2P11245 290 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 CCNOP22674 350 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 COL8A2P25067 703 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 PPOXP50336 477 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 MTCP1P56278 107 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 QRFPP83859 136 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 ZNF92Q03936 586 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 C11orf91Q3C1V1 193 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 PCGF3Q3KNV8 242 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 ALKBH6Q3KRA9 238 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 ACTBL2Q562R1 376 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 PLCXD3Q63HM9 321 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 C1orf229Q6ZS94 237 aaPredicted RBP6.62□□□□□ -1.35
VMP1-204ENST00000587259 ZNF584Q8IVC4 421 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 ZDHHC23Q8IYP9 409 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 IZUMO1Q8IYV9 350 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 SAXO1Q8IYX7 474 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 CADM3Q8N126 398 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 CPEB3Q8NE35 698 aaKnown RBP6.62□□□□□ -1.35
VMP1-204ENST00000587259 PXT1Q8NFP0 134 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 OR10R2Q8NGX6 335 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 OR52I2Q8NH67 350 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 GPX8Q8TED1 209 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 UBASH3BQ8TF42 649 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 TNFAIP8L1Q8WVP5 186 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 TAF15Q92804 592 aaKnown RBP eCLIP6.62□□□□□ -1.35
VMP1-204ENST00000587259 HIST1H2AAQ96QV6 131 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 TM2D1Q9BX74 207 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 METTL9Q9H1A3 318 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 AUNIPQ9H7T9 357 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 NOX3Q9HBY0 568 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 B3GNT2Q9NY97 397 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 TREM2Q9NZC2 230 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 MYEF2Q9P2K5 600 aaKnown RBP6.62□□□□□ -1.35
VMP1-204ENST00000587259 MPC1Q9Y5U8 109 aa6.62□□□□□ -1.35
VMP1-204ENST00000587259 LOC100509620A0A075B734 347 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 IGHV2OR16-5A0A0B4J2B6 119 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 IGKV1-9A0A0C4DH69 117 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 MEIOCA2RUB1 952 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 FAM90A10PA6NDY2 464 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 FAM90A18PA6NE21 464 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 FAM90A16PA6NEW6 464 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 FAM90A20PA6NIJ5 464 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 A6NIN4 97 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 FAM90A8PA6NJQ4 464 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 FAM90A7PA6NKC0 464 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 FAM90A22PA8MWA6 464 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 FAM90A12PA8MX19 464 aa6.61□□□□□ -1.35
VMP1-204ENST00000587259 FAM90A5PA8MXJ8 464 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms