RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 CCDC107Q8WV48 283 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 RND1Q92730 232 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 SCGB3A2Q96PL1 93 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 SPOCK3Q9BQ16 436 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 MED28Q9H204 178 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 OR51J1Q9H342 316 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 SPACA1Q9HBV2 294 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 MYOZ1Q9NP98 299 aaPredicted RBP8.88□□□□□ -0.99
LIG3-203ENST00000585370 ING3Q9NXR8 418 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 JKAMPQ9P055 326 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 Q9UFV3 132 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 PURGQ9UJV8 347 aaKnown RBP8.88□□□□□ -0.99
LIG3-203ENST00000585370 ZNF221Q9UK13 617 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 ITGB1BP2Q9UKP3 347 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 ST3GAL6Q9Y274 331 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 POLDIP2Q9Y2S7 368 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 KCNK7Q9Y2U2 307 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 VPS13CQ709C8 3753 aa8.88□□□□□ -0.99
LIG3-203ENST00000585370 A0A0A6YYJ9 748 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 A0A0B4J293 547 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 IGKV1-12A0A0C4DH73 117 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 LRP5LA4QPB2 252 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 MEIS3P1A6NDR6 274 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 POM121CA8CG34 1229 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 SNRPGP15A8MWD9 76 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 J3QT63 122 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 SSX5O60225 188 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 PDCD6O75340 191 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 IGKV1D-12P01611 117 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 AMY2AP04746 511 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 BMP5P22003 454 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 CA6P23280 308 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 DTYMKP23919 212 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 GABRR1P24046 479 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 CHATP28329 748 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 SSTR2P30874 369 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 PRSS12P56730 875 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 RBM11P57052 281 aaKnown RBP8.87□□□□□ -0.99
LIG3-203ENST00000585370 NAAAQ02083 359 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 PSG7Q13046 419 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 IL13RA2Q14627 380 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 CARTPTQ16568 116 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 TAF9Q16594 264 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 VAX1Q5SQQ9 334 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 MYPOPQ86VE0 399 aaPredicted RBP8.87□□□□□ -0.99
LIG3-203ENST00000585370 CALHM1Q8IU99 346 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 FBXL14Q8N1E6 418 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 ARRDC1Q8N5I2 433 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 OR51S1Q8NGJ8 323 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 OR13G1Q8NGZ3 307 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 OR6F1Q8NGZ6 308 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 OR4K15Q8NH41 348 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 NUDCD2Q8WVJ2 157 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 S100PBPQ96BU1 408 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 GINS4Q9BRT9 223 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 C1QTNF6Q9BXI9 259 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 OR51I2Q9H344 312 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 GHITMQ9H3K2 345 aa8.87□□□□□ -0.99
LIG3-203ENST00000585370 ITPR3Q14573 2671 aa8.86□□□□□ -0.99
LIG3-203ENST00000585370 EEF1E1-BLOC1S5C9J1V9 151 aa8.86□□□□□ -0.99
LIG3-203ENST00000585370 ARPC1BO15143 372 aaKnown RBP8.86□□□□□ -0.99
LIG3-203ENST00000585370 PLATP00750 562 aa8.86□□□□□ -0.99
LIG3-203ENST00000585370 FCER2P06734 321 aa8.86□□□□□ -0.99
LIG3-203ENST00000585370 SFTPBP07988 381 aa8.86□□□□□ -0.99
LIG3-203ENST00000585370 ZNF735P0CB33 412 aa8.86□□□□□ -0.99
LIG3-203ENST00000585370 GLRXP35754 106 aa8.86□□□□□ -0.99
LIG3-203ENST00000585370 OR3A3P47888 321 aa8.86□□□□□ -0.99
LIG3-203ENST00000585370 SELENOVP59797 346 aa8.86□□□□□ -0.99
LIG3-203ENST00000585370 CDK10Q15131 360 aa8.86□□□□□ -0.99
LIG3-203ENST00000585370 TESK1Q15569 626 aa8.86□□□□□ -0.99
LIG3-203ENST00000585370 OR8G1Q15617 311 aa8.86□□□□□ -0.99
LIG3-203ENST00000585370 GRK1Q15835 563 aa8.86□□□□□ -0.99
LIG3-203ENST00000585370 SRSF7Q16629 238 aaKnown RBP eCLIP8.86□□□□□ -0.99
LIG3-203ENST00000585370 TMEM255AQ5JRV8 349 aa8.86□□□□□ -0.99
LIG3-203ENST00000585370 SPATA46Q5T0L3 261 aa8.86□□□□□ -0.99
LIG3-203ENST00000585370 RGS7BPQ6MZT1 257 aaPredicted RBP8.86□□□□□ -0.99
LIG3-203ENST00000585370 HAGHLQ6PII5 290 aaPredicted RBP8.86□□□□□ -0.99
LIG3-203ENST00000585370 SEZ6L2Q6UXD5 910 aa8.86□□□□□ -0.99
LIG3-203ENST00000585370 GLDNQ6ZMI3 551 aaPredicted RBP8.86□□□□□ -0.99
LIG3-203ENST00000585370 LIX1LQ8IVB5 337 aa8.86□□□□□ -0.99
LIG3-203ENST00000585370 ZDHHC22Q8N966 263 aa8.86□□□□□ -0.99
LIG3-203ENST00000585370 DRAXINQ8NBI3 349 aaPredicted RBP8.86□□□□□ -0.99
LIG3-203ENST00000585370 BHLHE23Q8NDY6 225 aa8.86□□□□□ -0.99
LIG3-203ENST00000585370 CA5BP1Q8WTZ4 195 aa8.86□□□□□ -0.99
LIG3-203ENST00000585370 GTF3AQ92664 365 aaKnown RBP8.86□□□□□ -0.99
LIG3-203ENST00000585370 EMG1Q92979 244 aaKnown RBP8.86□□□□□ -0.99
LIG3-203ENST00000585370 DVL3Q92997 716 aaPredicted RBP8.86□□□□□ -0.99
LIG3-203ENST00000585370 FBXW5Q969U6 566 aa8.86□□□□□ -0.99
LIG3-203ENST00000585370 C14orf79Q96F83 325 aa8.86□□□□□ -0.99
LIG3-203ENST00000585370 TRAF4Q9BUZ4 470 aaPredicted RBP8.86□□□□□ -0.99
LIG3-203ENST00000585370 CXXC4Q9H2H0 198 aa8.86□□□□□ -0.99
LIG3-203ENST00000585370 OR51B6Q9H340 312 aa8.86□□□□□ -0.99
LIG3-203ENST00000585370 RIMS4Q9H426 269 aaPredicted RBP8.86□□□□□ -0.99
LIG3-203ENST00000585370 ELF5Q9UKW6 265 aaPredicted RBP8.86□□□□□ -0.99
LIG3-203ENST00000585370 AKAP6Q13023 2319 aa8.86□□□□□ -0.99
LIG3-203ENST00000585370 NIPBLQ6KC79 2804 aaeCLIP8.85□□□□□ -0.99
LIG3-203ENST00000585370 A0A1B0GWJ7 208 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 UBE2QL1A1L167 161 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 M0R1B8 84 aa8.85□□□□□ -0.99
LIG3-203ENST00000585370 TIMM8AO60220 97 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms