RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ENTHD1Q8IYW4 607 aa9.03□□□□□ -0.96
CCDC47-206ENST00000584112 BATF2Q8N1L9 274 aa9.03□□□□□ -0.96
CCDC47-206ENST00000584112 DTX3Q8N9I9 347 aa9.03□□□□□ -0.96
CCDC47-206ENST00000584112 DNAAF1Q8NEP3 725 aa9.03□□□□□ -0.96
CCDC47-206ENST00000584112 OR4M1Q8NGD0 313 aa9.03□□□□□ -0.96
CCDC47-206ENST00000584112 MRPL48Q96GC5 212 aaKnown RBP9.03□□□□□ -0.96
CCDC47-206ENST00000584112 MEGF9Q9H1U4 602 aa9.03□□□□□ -0.96
CCDC47-206ENST00000584112 PPA2Q9H2U2 334 aa9.03□□□□□ -0.96
CCDC47-206ENST00000584112 MTCH1Q9NZJ7 389 aa9.03□□□□□ -0.96
CCDC47-206ENST00000584112 IGKV1-27A0A075B6S5 117 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 DAPL1A0PJW8 107 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 C17orf98A8MV24 154 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 EI24O14681 340 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 ISG15P05161 165 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 PIPP12273 146 aaPredicted RBP9.02□□□□□ -0.97
CCDC47-206ENST00000584112 CCL3L1P16619 93 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 ZNF20P17024 532 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 PRKACBP22694 351 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 KIR3DL2P43630 455 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 ALDH3A2P51648 485 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 EDDM3BP56851 147 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 SNRPGP62308 76 aaKnown RBP9.02□□□□□ -0.97
CCDC47-206ENST00000584112 ACTA2P62736 377 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 ACTG2P63267 376 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 ZNF273Q14593 569 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 C11orf88Q6PI97 169 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 LHFPL2Q6ZUX7 228 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 SLC25A26Q70HW3 274 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 UTS2BQ765I0 119 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 EGFL6Q8IUX8 553 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 OR8H2Q8N162 312 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 C11orf42Q8N5U0 333 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 OR4C13Q8NGP0 309 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 OR2G2Q8NGZ5 317 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 EMG1Q92979 244 aaKnown RBP9.02□□□□□ -0.97
CCDC47-206ENST00000584112 SLAMF9Q96A28 289 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 RNFT2Q96EX2 444 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 SNX22Q96L94 193 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 RANBP3Q9H6Z4 567 aaPredicted RBP9.02□□□□□ -0.97
CCDC47-206ENST00000584112 SEBOXQ9HB31 216 aaPredicted RBP9.02□□□□□ -0.97
CCDC47-206ENST00000584112 FBLN5Q9UBX5 448 aa9.02□□□□□ -0.97
CCDC47-206ENST00000584112 PLECQ15149 4684 aaKnown RBP9.01□□□□□ -0.97
CCDC47-206ENST00000584112 SLC16A6O15403 523 aa9.01□□□□□ -0.97
CCDC47-206ENST00000584112 ENTPD6O75354 484 aa9.01□□□□□ -0.97
CCDC47-206ENST00000584112 ZNF737O75373 536 aa9.01□□□□□ -0.97
CCDC47-206ENST00000584112 RPSAP08865 295 aaKnown RBP9.01□□□□□ -0.97
CCDC47-206ENST00000584112 HTR1AP08908 422 aa9.01□□□□□ -0.97
CCDC47-206ENST00000584112 OCM2P0CE71 109 aa9.01□□□□□ -0.97
CCDC47-206ENST00000584112 OCMP0CE72 109 aaPredicted RBP9.01□□□□□ -0.97
CCDC47-206ENST00000584112 ZNF728P0DKX0 622 aa9.01□□□□□ -0.97
CCDC47-206ENST00000584112 COX7A1P24310 79 aa9.01□□□□□ -0.97
CCDC47-206ENST00000584112 PEX2P28328 305 aa9.01□□□□□ -0.97
CCDC47-206ENST00000584112 GABRA5P31644 462 aa9.01□□□□□ -0.97
CCDC47-206ENST00000584112 BMXP51813 675 aa9.01□□□□□ -0.97
CCDC47-206ENST00000584112 MEF2CQ06413 473 aaPredicted RBP9.01□□□□□ -0.97
CCDC47-206ENST00000584112 LY6EQ16553 131 aa9.01□□□□□ -0.97
CCDC47-206ENST00000584112 SLC35E4Q6ICL7 350 aa9.01□□□□□ -0.97
CCDC47-206ENST00000584112 FDX2Q6P4F2 183 aa9.01□□□□□ -0.97
CCDC47-206ENST00000584112 ZNF782Q6ZMW2 699 aaPredicted RBP9.01□□□□□ -0.97
CCDC47-206ENST00000584112 CCDC121Q6ZUS5 278 aa9.01□□□□□ -0.97
CCDC47-206ENST00000584112 ACBD7Q8N6N7 88 aa9.01□□□□□ -0.97
CCDC47-206ENST00000584112 OR13D1Q8NGV5 346 aa9.01□□□□□ -0.97
CCDC47-206ENST00000584112 C17orf50Q8WW18 174 aa9.01□□□□□ -0.97
CCDC47-206ENST00000584112 FOXRED1Q96CU9 486 aaPredicted RBP9.01□□□□□ -0.97
CCDC47-206ENST00000584112 AJUBAQ96IF1 538 aa9.01□□□□□ -0.97
CCDC47-206ENST00000584112 NEK6Q9HC98 313 aa9.01□□□□□ -0.97
CCDC47-206ENST00000584112 GLS2Q9UI32 602 aa9.01□□□□□ -0.97
CCDC47-206ENST00000584112 HHLA2Q9UM44 414 aa9.01□□□□□ -0.97
CCDC47-206ENST00000584112 TBL2Q9Y4P3 447 aaKnown RBP9.01□□□□□ -0.97
CCDC47-206ENST00000584112 TRBV2A0A0J9YWF9 115 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 hADV38S2A0JD32 116 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 F8VVB4 439 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 F8VWA3 439 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 J3QRE1 110 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 MPZL2O60487 215 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 INMTO95050 263 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 HAND1O96004 215 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 ATF1P18846 271 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 AZGP1P25311 298 aaKnown RBP9□□□□□ -0.97
CCDC47-206ENST00000584112 KIR2DS4P43632 304 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 POU3F4P49335 361 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 CCR9P51686 369 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 DLX6P56179 175 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 MTCP1P56278 107 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 OR12D2P58182 307 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 ZNF91Q05481 1191 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 KPNB1Q14974 876 aaKnown RBP9□□□□□ -0.97
CCDC47-206ENST00000584112 ZIK1Q3SY52 487 aaPredicted RBP9□□□□□ -0.97
CCDC47-206ENST00000584112 SPIN3Q5JUX0 258 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 RDH10Q8IZV5 341 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 FAM58AQ8N1B3 248 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 OR2T6Q8NHC8 308 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 PPP1R35Q8TAP8 253 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 SPSB1Q96BD6 273 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 FGGYQ96C11 551 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 ADAT3Q96EY9 351 aaPredicted RBP9□□□□□ -0.97
CCDC47-206ENST00000584112 ZNF714Q96N38 554 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 OPALINQ96PE5 141 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 MBOAT4Q96T53 435 aa9□□□□□ -0.97
CCDC47-206ENST00000584112 NPFFR1Q9GZQ6 430 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms