RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	SESN1	Q9Y6P5	492 aa		12.16	□□□□□ -0.46
SREBF1-222	ENST00000583732	FAM172BP	A6NC97	362 aa		12.15	□□□□□ -0.46
SREBF1-222	ENST00000583732	GATB	O75879	557 aa	Known RBP	12.15	□□□□□ -0.46
SREBF1-222	ENST00000583732	MMP23A	O75900	390 aa		12.15	□□□□□ -0.46
SREBF1-222	ENST00000583732	DNAJC8	O75937	253 aa	Predicted RBP	12.15	□□□□□ -0.46
SREBF1-222	ENST00000583732	MPIG6B	O95866	241 aa		12.15	□□□□□ -0.46
SREBF1-222	ENST00000583732	CD24	P25063	80 aa		12.15	□□□□□ -0.46
SREBF1-222	ENST00000583732	PEX2	P28328	305 aa		12.15	□□□□□ -0.46
SREBF1-222	ENST00000583732	FUT6	P51993	359 aa		12.15	□□□□□ -0.46
SREBF1-222	ENST00000583732	MEF2C	Q06413	473 aa	Predicted RBP	12.15	□□□□□ -0.46
SREBF1-222	ENST00000583732	DNAL1	Q4LDG9	190 aa		12.15	□□□□□ -0.46
SREBF1-222	ENST00000583732	MINOS1	Q5TGZ0	78 aa		12.15	□□□□□ -0.46
SREBF1-222	ENST00000583732	C12orf73	Q69YU5	71 aa		12.15	□□□□□ -0.46
SREBF1-222	ENST00000583732	BAIAP2L2	Q6UXY1	529 aa		12.15	□□□□□ -0.46
SREBF1-222	ENST00000583732	OR10H4	Q8NGA5	316 aa		12.15	□□□□□ -0.46
SREBF1-222	ENST00000583732	OR5AU1	Q8NGC0	362 aa		12.15	□□□□□ -0.46
SREBF1-222	ENST00000583732	UTP4	Q969X6	686 aa	Known RBP	12.15	□□□□□ -0.46
SREBF1-222	ENST00000583732	CLEC7A	Q9BXN2	247 aa		12.15	□□□□□ -0.46
SREBF1-222	ENST00000583732	TMEM133	Q9H2Q1	129 aa		12.15	□□□□□ -0.46
SREBF1-222	ENST00000583732	RBFOX1	Q9NWB1	397 aa	Known RBP	12.15	□□□□□ -0.46
SREBF1-222	ENST00000583732	ZNF281	Q9Y2X9	895 aa		12.15	□□□□□ -0.46
SREBF1-222	ENST00000583732	LINC00312	Q9Y6C7	94 aa		12.15	□□□□□ -0.46
SREBF1-222	ENST00000583732	MINOS1-NBL1	R4GNA1	71 aa		12.15	□□□□□ -0.46
SREBF1-222	ENST00000583732	LOC107986453	A0A1B0GWG9	222 aa		12.14	□□□□□ -0.47
SREBF1-222	ENST00000583732		A0A1W2PQL4	384 aa	Predicted RBP	12.14	□□□□□ -0.47
SREBF1-222	ENST00000583732	ZAR1L	A6NP61	321 aa		12.14	□□□□□ -0.47
SREBF1-222	ENST00000583732	SIRPB1	O00241	398 aa		12.14	□□□□□ -0.47
SREBF1-222	ENST00000583732	ALDOB	P05062	364 aa		12.14	□□□□□ -0.47
SREBF1-222	ENST00000583732	PRKACA	P17612	351 aa		12.14	□□□□□ -0.47
SREBF1-222	ENST00000583732	BCL3	P20749	454 aa		12.14	□□□□□ -0.47
SREBF1-222	ENST00000583732	NPBWR2	P48146	333 aa		12.14	□□□□□ -0.47
SREBF1-222	ENST00000583732	DYNLT3	P51808	116 aa		12.14	□□□□□ -0.47
SREBF1-222	ENST00000583732	ZNF91	Q05481	1191 aa		12.14	□□□□□ -0.47
SREBF1-222	ENST00000583732	PRAMEF5	Q5TYX0	476 aa		12.14	□□□□□ -0.47
SREBF1-222	ENST00000583732	CCDC121	Q6ZUS5	278 aa		12.14	□□□□□ -0.47
SREBF1-222	ENST00000583732	OCSTAMP	Q9BR26	566 aa		12.14	□□□□□ -0.47
SREBF1-222	ENST00000583732	CHST5	Q9GZS9	411 aa		12.14	□□□□□ -0.47
SREBF1-222	ENST00000583732	METTL15	A6NJ78	407 aa		12.13	□□□□□ -0.47
SREBF1-222	ENST00000583732	SH2D7	A6NKC9	451 aa	Predicted RBP	12.13	□□□□□ -0.47
SREBF1-222	ENST00000583732	PSPN	O60542	156 aa		12.13	□□□□□ -0.47
SREBF1-222	ENST00000583732	AZGP1	P25311	298 aa	Known RBP	12.13	□□□□□ -0.47
SREBF1-222	ENST00000583732	HTR1D	P28221	377 aa		12.13	□□□□□ -0.47
SREBF1-222	ENST00000583732	EFNB1	P98172	346 aa		12.13	□□□□□ -0.47
SREBF1-222	ENST00000583732	KHDC1L	Q5JSQ8	128 aa		12.13	□□□□□ -0.47
SREBF1-222	ENST00000583732	RDH10	Q8IZV5	341 aa		12.13	□□□□□ -0.47
SREBF1-222	ENST00000583732	PRSS35	Q8N3Z0	413 aa		12.13	□□□□□ -0.47
SREBF1-222	ENST00000583732	OR4P4	Q8NGL7	312 aa		12.13	□□□□□ -0.47
SREBF1-222	ENST00000583732	CAPSL	Q8WWF8	208 aa		12.13	□□□□□ -0.47
SREBF1-222	ENST00000583732	RFT1	Q96AA3	541 aa		12.13	□□□□□ -0.47
SREBF1-222	ENST00000583732	TCRBV4S1A1T	A0A5B7	111 aa		12.12	□□□□□ -0.47
SREBF1-222	ENST00000583732		G3V2T6	193 aa		12.12	□□□□□ -0.47
SREBF1-222	ENST00000583732	ENTPD6	O75354	484 aa		12.12	□□□□□ -0.47
SREBF1-222	ENST00000583732	CYB5A	P00167	134 aa		12.12	□□□□□ -0.47
SREBF1-222	ENST00000583732	SERPINA3	P01011	423 aa		12.12	□□□□□ -0.47
SREBF1-222	ENST00000583732	PF4	P02776	101 aa		12.12	□□□□□ -0.47
SREBF1-222	ENST00000583732	KIR3DL2	P43630	455 aa		12.12	□□□□□ -0.47
SREBF1-222	ENST00000583732	OR3A1	P47881	315 aa		12.12	□□□□□ -0.47
SREBF1-222	ENST00000583732	ATP1B3	P54709	279 aa		12.12	□□□□□ -0.47
SREBF1-222	ENST00000583732	IL18R1	Q13478	541 aa		12.12	□□□□□ -0.47
SREBF1-222	ENST00000583732	TP53I3	Q53FA7	332 aa		12.12	□□□□□ -0.47
SREBF1-222	ENST00000583732	CENPV	Q7Z7K6	275 aa	Predicted RBP	12.12	□□□□□ -0.47
SREBF1-222	ENST00000583732	FAM58A	Q8N1B3	248 aa		12.12	□□□□□ -0.47
SREBF1-222	ENST00000583732	BCAS4	Q8TDM0	211 aa		12.12	□□□□□ -0.47
SREBF1-222	ENST00000583732	ING3	Q9NXR8	418 aa		12.12	□□□□□ -0.47
SREBF1-222	ENST00000583732	WARS2	Q9UGM6	360 aa	Known RBP	12.12	□□□□□ -0.47
SREBF1-222	ENST00000583732	GNG8	Q9UK08	70 aa		12.12	□□□□□ -0.47
SREBF1-222	ENST00000583732	FAM90A22P	A8MWA6	464 aa		12.11	□□□□□ -0.47
SREBF1-222	ENST00000583732	MGST3	O14880	152 aa		12.11	□□□□□ -0.47
SREBF1-222	ENST00000583732	LPL	P06858	475 aa		12.11	□□□□□ -0.47
SREBF1-222	ENST00000583732	OR2T7	P0C7T2	308 aa		12.11	□□□□□ -0.47
SREBF1-222	ENST00000583732	HTR1F	P30939	366 aa		12.11	□□□□□ -0.47
SREBF1-222	ENST00000583732	ATP6V1E1	P36543	226 aa		12.11	□□□□□ -0.47
SREBF1-222	ENST00000583732	RBP2	P50120	134 aa		12.11	□□□□□ -0.47
SREBF1-222	ENST00000583732	P2RX3	P56373	397 aa		12.11	□□□□□ -0.47
SREBF1-222	ENST00000583732	CD83	Q01151	205 aa		12.11	□□□□□ -0.47
SREBF1-222	ENST00000583732	ATP6AP1	Q15904	470 aa		12.11	□□□□□ -0.47
SREBF1-222	ENST00000583732	ABCA11P	Q4W5N1	156 aa		12.11	□□□□□ -0.47
SREBF1-222	ENST00000583732	C10orf99	Q6UWK7	81 aa		12.11	□□□□□ -0.47
SREBF1-222	ENST00000583732	ZBTB49	Q6ZSB9	765 aa		12.11	□□□□□ -0.47
SREBF1-222	ENST00000583732	FAM220A	Q7Z4H9	259 aa		12.11	□□□□□ -0.47
SREBF1-222	ENST00000583732		Q8IYB0	196 aa		12.11	□□□□□ -0.47
SREBF1-222	ENST00000583732	ENTHD1	Q8IYW4	607 aa		12.11	□□□□□ -0.47
SREBF1-222	ENST00000583732	ABHD12	Q8N2K0	398 aa		12.11	□□□□□ -0.47
SREBF1-222	ENST00000583732	STMN2	Q93045	179 aa		12.11	□□□□□ -0.47
SREBF1-222	ENST00000583732	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	12.11	□□□□□ -0.47
SREBF1-222	ENST00000583732	ADAT3	Q96EY9	351 aa	Predicted RBP	12.11	□□□□□ -0.47
SREBF1-222	ENST00000583732	SLC25A33	Q9BSK2	321 aa		12.11	□□□□□ -0.47
SREBF1-222	ENST00000583732	EXOSC4	Q9NPD3	245 aa	Known RBP	12.11	□□□□□ -0.47
SREBF1-222	ENST00000583732	GSTK1	Q9Y2Q3	226 aa		12.11	□□□□□ -0.47
SREBF1-222	ENST00000583732	IGKV1-9	A0A0C4DH69	117 aa		12.1	□□□□□ -0.47
SREBF1-222	ENST00000583732	TRBV2	A0A0J9YWF9	115 aa		12.1	□□□□□ -0.47
SREBF1-222	ENST00000583732		H3BUI4	141 aa		12.1	□□□□□ -0.47
SREBF1-222	ENST00000583732	UBC	P0CG48	685 aa	Known RBP	12.1	□□□□□ -0.47
SREBF1-222	ENST00000583732	ZNF20	P17024	532 aa		12.1	□□□□□ -0.47
SREBF1-222	ENST00000583732	CDK2	P24941	298 aa		12.1	□□□□□ -0.47
SREBF1-222	ENST00000583732	POLR2I	P36954	125 aa	Known RBP	12.1	□□□□□ -0.47
SREBF1-222	ENST00000583732	GDNF	P39905	211 aa		12.1	□□□□□ -0.47
SREBF1-222	ENST00000583732	MTCP1	P56278	107 aa		12.1	□□□□□ -0.47
SREBF1-222	ENST00000583732	TCTEX1D4	Q5JR98	221 aa		12.1	□□□□□ -0.47
SREBF1-222	ENST00000583732	C9orf152	Q5JTZ5	239 aa		12.1	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms