RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 ZNRF1Q8ND25 227 aa17.12■□□□□ 0.33
CCDC42-203ENST00000581598 OR2G2Q8NGZ5 317 aa17.12■□□□□ 0.33
CCDC42-203ENST00000581598 LINC01006Q8NI28 216 aa17.12■□□□□ 0.33
CCDC42-203ENST00000581598 OPALINQ96PE5 141 aa17.12■□□□□ 0.33
CCDC42-203ENST00000581598 A0A1W2PQ09 198 aa17.11■□□□□ 0.33
CCDC42-203ENST00000581598 J3QT63 122 aa17.11■□□□□ 0.33
CCDC42-203ENST00000581598 RPP14O95059 124 aaKnown RBP17.11■□□□□ 0.33
CCDC42-203ENST00000581598 PGA5P0DJD9 388 aa17.11■□□□□ 0.33
CCDC42-203ENST00000581598 GTF2A1P52655 376 aaPredicted RBP17.11■□□□□ 0.33
CCDC42-203ENST00000581598 GP2P55259 537 aaKnown RBP17.11■□□□□ 0.33
CCDC42-203ENST00000581598 KLRD1Q13241 179 aa17.11■□□□□ 0.33
CCDC42-203ENST00000581598 TPBGQ13641 420 aa17.11■□□□□ 0.33
CCDC42-203ENST00000581598 CDK5R1Q15078 307 aa17.11■□□□□ 0.33
CCDC42-203ENST00000581598 BCL2L15Q5TBC7 163 aa17.11■□□□□ 0.33
CCDC42-203ENST00000581598 DMKNQ6E0U4 476 aaPredicted RBP17.11■□□□□ 0.33
CCDC42-203ENST00000581598 RPL22L1Q6P5R6 122 aaKnown RBP17.11■□□□□ 0.33
CCDC42-203ENST00000581598 CATSPERDQ86XM0 798 aa17.11■□□□□ 0.33
CCDC42-203ENST00000581598 ZNF573Q86YE8 665 aa17.11■□□□□ 0.33
CCDC42-203ENST00000581598 OR5D13Q8NGL4 314 aa17.11■□□□□ 0.33
CCDC42-203ENST00000581598 VPREB3Q9UKI3 123 aa17.11■□□□□ 0.33
CCDC42-203ENST00000581598 OR52A1Q9UKL2 312 aa17.11■□□□□ 0.33
CCDC42-203ENST00000581598 RNF114Q9Y508 228 aa17.11■□□□□ 0.33
CCDC42-203ENST00000581598 SIRT4Q9Y6E7 314 aaPredicted RBP17.11■□□□□ 0.33
CCDC42-203ENST00000581598 A0A1B0GTI1 187 aa17.1■□□□□ 0.33
CCDC42-203ENST00000581598 BTBD17A6NE02 478 aa17.1■□□□□ 0.33
CCDC42-203ENST00000581598 CD1AP06126 327 aa17.1■□□□□ 0.33
CCDC42-203ENST00000581598 CPEP16870 476 aa17.1■□□□□ 0.33
CCDC42-203ENST00000581598 CCL1P22362 96 aa17.1■□□□□ 0.33
CCDC42-203ENST00000581598 PSMB9P28065 219 aa17.1■□□□□ 0.33
CCDC42-203ENST00000581598 SAA4P35542 130 aa17.1■□□□□ 0.33
CCDC42-203ENST00000581598 CCR9P51686 369 aa17.1■□□□□ 0.33
CCDC42-203ENST00000581598 PROK1P58294 105 aa17.1■□□□□ 0.33
CCDC42-203ENST00000581598 NANOS3P60323 173 aaKnown RBP17.1■□□□□ 0.33
CCDC42-203ENST00000581598 ALKBH1Q13686 389 aaKnown RBP17.1■□□□□ 0.33
CCDC42-203ENST00000581598 DMRTC1Q5HYR2 192 aa17.1■□□□□ 0.33
CCDC42-203ENST00000581598 TMEM185AQ8NFB2 350 aa17.1■□□□□ 0.33
CCDC42-203ENST00000581598 OR14K1Q8NGZ2 314 aa17.1■□□□□ 0.33
CCDC42-203ENST00000581598 OR5R1Q8NH85 324 aa17.1■□□□□ 0.33
CCDC42-203ENST00000581598 C16orf95Q9H693 158 aa17.1■□□□□ 0.33
CCDC42-203ENST00000581598 POLDIP2Q9Y2S7 368 aa17.1■□□□□ 0.33
CCDC42-203ENST00000581598 PQLC2LA1A4F0 135 aa17.09■□□□□ 0.33
CCDC42-203ENST00000581598 OR4C45A6NMZ5 311 aa17.09■□□□□ 0.33
CCDC42-203ENST00000581598 MPZP25189 248 aa17.09■□□□□ 0.33
CCDC42-203ENST00000581598 KIR3DL2P43630 455 aa17.09■□□□□ 0.33
CCDC42-203ENST00000581598 HAAOP46952 286 aa17.09■□□□□ 0.33
CCDC42-203ENST00000581598 DLX1P56177 255 aa17.09■□□□□ 0.33
CCDC42-203ENST00000581598 SRSF4Q08170 494 aaKnown RBP17.09■□□□□ 0.33
CCDC42-203ENST00000581598 GPR50Q13585 617 aa17.09■□□□□ 0.33
CCDC42-203ENST00000581598 HCP5Q6MZN7 132 aa17.09■□□□□ 0.33
CCDC42-203ENST00000581598 BRICD5Q6PL45 260 aa17.09■□□□□ 0.33
CCDC42-203ENST00000581598 Q6ZSV7 163 aa17.09■□□□□ 0.33
CCDC42-203ENST00000581598 PRSS35Q8N3Z0 413 aa17.09■□□□□ 0.33
CCDC42-203ENST00000581598 ZNF561Q8N587 486 aa17.09■□□□□ 0.33
CCDC42-203ENST00000581598 SMIM19Q96E16 107 aa17.09■□□□□ 0.33
CCDC42-203ENST00000581598 ELL3Q9HB65 397 aaPredicted RBP17.09■□□□□ 0.33
CCDC42-203ENST00000581598 FRRS1LQ9P0K9 344 aa17.09■□□□□ 0.33
CCDC42-203ENST00000581598 GTF2A1LQ9UNN4 478 aa17.09■□□□□ 0.33
CCDC42-203ENST00000581598 SF3B6Q9Y3B4 125 aaKnown RBP17.09■□□□□ 0.33
CCDC42-203ENST00000581598 WNK1Q9H4A3 2382 aa17.09■□□□□ 0.33
CCDC42-203ENST00000581598 MEIOCA2RUB1 952 aa17.08■□□□□ 0.32
CCDC42-203ENST00000581598 RFPL4AA6NLU0 287 aa17.08■□□□□ 0.32
CCDC42-203ENST00000581598 RFPL4AL1F8VTS6 287 aa17.08■□□□□ 0.32
CCDC42-203ENST00000581598 TIMM23O14925 209 aa17.08■□□□□ 0.32
CCDC42-203ENST00000581598 SYNGR1O43759 233 aa17.08■□□□□ 0.32
CCDC42-203ENST00000581598 TSPAN9O75954 239 aa17.08■□□□□ 0.32
CCDC42-203ENST00000581598 PAHP00439 452 aa17.08■□□□□ 0.32
CCDC42-203ENST00000581598 HSMCR30P0CW71 290 aa17.08■□□□□ 0.32
CCDC42-203ENST00000581598 RPL5P46777 297 aaKnown RBP17.08■□□□□ 0.32
CCDC42-203ENST00000581598 PRB3Q04118 309 aaPredicted RBP17.08■□□□□ 0.32
CCDC42-203ENST00000581598 SSX1Q16384 188 aa17.08■□□□□ 0.32
CCDC42-203ENST00000581598 MIDNQ504T8 468 aa17.08■□□□□ 0.32
CCDC42-203ENST00000581598 CD177Q8N6Q3 437 aa17.08■□□□□ 0.32
CCDC42-203ENST00000581598 ZFP41Q8N8Y5 198 aa17.08■□□□□ 0.32
CCDC42-203ENST00000581598 BEND2Q8NDZ0 799 aa17.08■□□□□ 0.32
CCDC42-203ENST00000581598 UFD1Q92890 307 aa17.08■□□□□ 0.32
CCDC42-203ENST00000581598 PGLYRP3Q96LB9 341 aa17.08■□□□□ 0.32
CCDC42-203ENST00000581598 NRIP2Q9BQI9 281 aa17.08■□□□□ 0.32
CCDC42-203ENST00000581598 HES4Q9HCC6 221 aa17.08■□□□□ 0.32
CCDC42-203ENST00000581598 GPR173Q9NS66 373 aa17.08■□□□□ 0.32
CCDC42-203ENST00000581598 A0A1W2PPH5 198 aa17.07■□□□□ 0.32
CCDC42-203ENST00000581598 A0A1W2PRD5 423 aa17.07■□□□□ 0.32
CCDC42-203ENST00000581598 A0A1W2PRF3 423 aa17.07■□□□□ 0.32
CCDC42-203ENST00000581598 A0A1W2PRM7 423 aa17.07■□□□□ 0.32
CCDC42-203ENST00000581598 PRDX2P32119 198 aa17.07■□□□□ 0.32
CCDC42-203ENST00000581598 TGFBR2P37173 567 aa17.07■□□□□ 0.32
CCDC42-203ENST00000581598 KRTAP10-3P60369 221 aa17.07■□□□□ 0.32
CCDC42-203ENST00000581598 DHRS7BQ6IAN0 325 aaPredicted RBP17.07■□□□□ 0.32
CCDC42-203ENST00000581598 FAM185AQ8N0U4 392 aa17.07■□□□□ 0.32
CCDC42-203ENST00000581598 PNKDQ8N490 385 aa17.07■□□□□ 0.32
CCDC42-203ENST00000581598 CCDC54Q8NEL0 328 aa17.07■□□□□ 0.32
CCDC42-203ENST00000581598 OR13F1Q8NGS4 319 aa17.07■□□□□ 0.32
CCDC42-203ENST00000581598 PKIBQ9C010 78 aa17.07■□□□□ 0.32
CCDC42-203ENST00000581598 C19orf12Q9NSK7 152 aa17.07■□□□□ 0.32
CCDC42-203ENST00000581598 SLC22A13Q9Y226 551 aa17.07■□□□□ 0.32
CCDC42-203ENST00000581598 TRBV2A0A0J9YWF9 115 aa17.06■□□□□ 0.32
CCDC42-203ENST00000581598 TMEM212A6NML5 194 aa17.06■□□□□ 0.32
CCDC42-203ENST00000581598 ZFPL1O95159 310 aa17.06■□□□□ 0.32
CCDC42-203ENST00000581598 CELP19835 753 aa17.06■□□□□ 0.32
CCDC42-203ENST00000581598 CAPZA1P52907 286 aa17.06■□□□□ 0.32
CCDC42-203ENST00000581598 IL24Q13007 206 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms