RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 NCR3LG1Q68D85 454 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 TMEM200BQ69YZ2 307 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 TRAPPC6BQ86SZ2 158 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 PARP16Q8N5Y8 322 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 KIR3DL3Q8N743 410 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.4□□□□□ -1.54
TRAF4-213ENST00000578917 ZFP41Q8N8Y5 198 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 LY6G5BQ8NDX9 201 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 OR52N1Q8NH53 320 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 PPP1R35Q8TAP8 253 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 TNFAIP8L1Q8WVP5 186 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 TMEM106AQ96A25 262 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 DACT3Q96B18 629 aaPredicted RBP5.4□□□□□ -1.54
TRAF4-213ENST00000578917 TBX15Q96SF7 602 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 JAM3Q9BX67 310 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 CCDC90BQ9GZT6 254 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 FAM234AQ9H0X4 552 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 SIRPDQ9H106 197 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 NOX4Q9NPH5 578 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 PLCXD1Q9NUJ7 323 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 RBFOX1Q9NWB1 397 aaKnown RBP5.4□□□□□ -1.54
TRAF4-213ENST00000578917 ING3Q9NXR8 418 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 CNOT2Q9NZN8 540 aaKnown RBP5.4□□□□□ -1.54
TRAF4-213ENST00000578917 PSORS1C1Q9UIG5 152 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 ZNF222Q9UK12 451 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 ING4Q9UNL4 249 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 SF3B6Q9Y3B4 125 aaKnown RBP5.4□□□□□ -1.54
TRAF4-213ENST00000578917 TPRKBQ9Y3C4 175 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 YLPM1P49750 1951 aaKnown RBP5.4□□□□□ -1.55
TRAF4-213ENST00000578917 MDFIC2A0A1B0GVS7 189 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 A0A1W2PPK0 400 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 hADV38S2A0JD32 116 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 MEX3AA1L020 520 aaKnown RBP5.39□□□□□ -1.55
TRAF4-213ENST00000578917 FUOMA2VDF0 154 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 DNAJC9-AS1A6NH13 148 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 H0YJX3 145 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 M0R1W7 72 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 SIRPB1O00241 398 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 OGG1O15527 345 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 FCN3O75636 299 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 HTR3BO95264 441 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 CSTBP04080 98 aaKnown RBP5.39□□□□□ -1.55
TRAF4-213ENST00000578917 FBP1P09467 338 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 MMP9P14780 707 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 ZNF44P15621 663 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 C21orf33P30042 268 aaPredicted RBP5.39□□□□□ -1.55
TRAF4-213ENST00000578917 BMXP51813 675 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 AQP4P55087 323 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 WNT4P56705 351 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 ERVK11-1P61568 191 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 DYNC1I2Q13409 638 aaKnown RBP5.39□□□□□ -1.55
TRAF4-213ENST00000578917 CDK5R1Q15078 307 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 SLC9A3R2Q15599 337 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 YIF1BQ5BJH7 314 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 SPIN3Q5JUX0 258 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 C6orf141Q5SZD1 244 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 XAF1Q6GPH4 301 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 IZUMO2Q6UXV1 221 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 C9orf139Q6ZV77 190 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 SAXO1Q8IYX7 474 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 ZDHHC22Q8N966 263 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 C8orf46Q8TAG6 207 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 SSMEM1Q8WWF3 244 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 NRG4Q8WWG1 115 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 SMIM19Q96E16 107 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 SNX22Q96L94 193 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 ZNF649Q9BS31 505 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 MND1Q9BWT6 205 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 CHST6Q9GZX3 395 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 DPAGT1Q9H3H5 408 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 ZMAT3Q9HA38 289 aaKnown RBP5.39□□□□□ -1.55
TRAF4-213ENST00000578917 HES4Q9HCC6 221 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 HMG20AQ9NP66 347 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 EXOSC4Q9NPD3 245 aaKnown RBP5.39□□□□□ -1.55
TRAF4-213ENST00000578917 TMEM138Q9NPI0 162 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 ESM1Q9NQ30 184 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 PCDHB16Q9NRJ7 776 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 C19orf12Q9NSK7 152 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 TAS2R4Q9NYW5 299 aa5.39□□□□□ -1.55
TRAF4-213ENST00000578917 TRGV10A0A0A0MS01 117 aa5.38□□□□□ -1.55
TRAF4-213ENST00000578917 A0A0U1RQK1 487 aa5.38□□□□□ -1.55
TRAF4-213ENST00000578917 RNASEK-C17orf49H0YIS7 233 aa5.38□□□□□ -1.55
TRAF4-213ENST00000578917 MGST3O14880 152 aa5.38□□□□□ -1.55
TRAF4-213ENST00000578917 NPFFO15130 113 aa5.38□□□□□ -1.55
TRAF4-213ENST00000578917 ALX3O95076 343 aa5.38□□□□□ -1.55
TRAF4-213ENST00000578917 HSMCR30P0CW71 290 aa5.38□□□□□ -1.55
TRAF4-213ENST00000578917 ZNF728P0DKX0 622 aa5.38□□□□□ -1.55
TRAF4-213ENST00000578917 CCL3L1P16619 93 aa5.38□□□□□ -1.55
TRAF4-213ENST00000578917 COX7A1P24310 79 aa5.38□□□□□ -1.55
TRAF4-213ENST00000578917 BDKRB2P30411 391 aa5.38□□□□□ -1.55
TRAF4-213ENST00000578917 ZNF93P35789 620 aaPredicted RBP5.38□□□□□ -1.55
TRAF4-213ENST00000578917 TGFBR2P37173 567 aa5.38□□□□□ -1.55
TRAF4-213ENST00000578917 PTGFRP43088 359 aa5.38□□□□□ -1.55
TRAF4-213ENST00000578917 UBE2E1P51965 193 aa5.38□□□□□ -1.55
TRAF4-213ENST00000578917 DLX1P56177 255 aa5.38□□□□□ -1.55
TRAF4-213ENST00000578917 ERVFRD-1P60508 538 aa5.38□□□□□ -1.55
TRAF4-213ENST00000578917 MEF2CQ06413 473 aaPredicted RBP5.38□□□□□ -1.55
TRAF4-213ENST00000578917 ACSM1Q08AH1 577 aa5.38□□□□□ -1.55
TRAF4-213ENST00000578917 FOXL1Q12952 345 aa5.38□□□□□ -1.55
TRAF4-213ENST00000578917 KLRD1Q13241 179 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms