RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 FAM58AQ8N1B3 248 aa11.89□□□□□ -0.51
MKS1-207ENST00000578789 Q8N7P7 452 aa11.89□□□□□ -0.51
MKS1-207ENST00000578789 OR5D18Q8NGL1 313 aa11.89□□□□□ -0.51
MKS1-207ENST00000578789 OR13C5Q8NGS8 318 aa11.89□□□□□ -0.51
MKS1-207ENST00000578789 ZNF48Q96MX3 618 aaPredicted RBP11.89□□□□□ -0.51
MKS1-207ENST00000578789 MND1Q9BWT6 205 aa11.89□□□□□ -0.51
MKS1-207ENST00000578789 DUSP21Q9H596 190 aa11.89□□□□□ -0.51
MKS1-207ENST00000578789 UNKLQ9H9P5 680 aaKnown RBP11.89□□□□□ -0.51
MKS1-207ENST00000578789 HMG20AQ9NP66 347 aa11.89□□□□□ -0.51
MKS1-207ENST00000578789 C19orf12Q9NSK7 152 aa11.89□□□□□ -0.51
MKS1-207ENST00000578789 IL36RNQ9UBH0 155 aa11.89□□□□□ -0.51
MKS1-207ENST00000578789 LSM2Q9Y333 95 aaKnown RBP11.89□□□□□ -0.51
MKS1-207ENST00000578789 TPRKBQ9Y3C4 175 aa11.89□□□□□ -0.51
MKS1-207ENST00000578789 PCDHGB5Q9Y5G0 923 aa11.89□□□□□ -0.51
MKS1-207ENST00000578789 DSCAML1Q8TD84 2053 aa11.89□□□□□ -0.51
MKS1-207ENST00000578789 TRBV5-7A0A0A0MS05 114 aa11.88□□□□□ -0.51
MKS1-207ENST00000578789 A0A1W2PQ09 198 aa11.88□□□□□ -0.51
MKS1-207ENST00000578789 PTGES3LE9PB15 166 aa11.88□□□□□ -0.51
MKS1-207ENST00000578789 GPX5O75715 221 aa11.88□□□□□ -0.51
MKS1-207ENST00000578789 INMTO95050 263 aa11.88□□□□□ -0.51
MKS1-207ENST00000578789 HAND1O96004 215 aa11.88□□□□□ -0.51
MKS1-207ENST00000578789 ALDOBP05062 364 aa11.88□□□□□ -0.51
MKS1-207ENST00000578789 IGFBP3P17936 291 aaPredicted RBP11.88□□□□□ -0.51
MKS1-207ENST00000578789 FSTP19883 344 aa11.88□□□□□ -0.51
MKS1-207ENST00000578789 VHLP40337 213 aa11.88□□□□□ -0.51
MKS1-207ENST00000578789 BRD3OSQ6XYD6 125 aa11.88□□□□□ -0.51
MKS1-207ENST00000578789 SIGLECL1Q8N7X8 197 aa11.88□□□□□ -0.51
MKS1-207ENST00000578789 ZDHHC22Q8N966 263 aa11.88□□□□□ -0.51
MKS1-207ENST00000578789 PXT1Q8NFP0 134 aa11.88□□□□□ -0.51
MKS1-207ENST00000578789 SPATA3Q8NHX4 192 aa11.88□□□□□ -0.51
MKS1-207ENST00000578789 SGCDQ92629 289 aa11.88□□□□□ -0.51
MKS1-207ENST00000578789 C19orf24Q9BVV8 132 aa11.88□□□□□ -0.51
MKS1-207ENST00000578789 PRDM13Q9H4Q3 707 aa11.88□□□□□ -0.51
MKS1-207ENST00000578789 TMEM138Q9NPI0 162 aa11.88□□□□□ -0.51
MKS1-207ENST00000578789 ESM1Q9NQ30 184 aa11.88□□□□□ -0.51
MKS1-207ENST00000578789 RAB26Q9ULW5 256 aa11.88□□□□□ -0.51
MKS1-207ENST00000578789 DNHD1Q96M86 4753 aa11.88□□□□□ -0.51
MKS1-207ENST00000578789 IGHV1-69DA0A0B4J2H0 117 aa11.87□□□□□ -0.51
MKS1-207ENST00000578789 TMEM82A0PJX8 343 aa11.87□□□□□ -0.51
MKS1-207ENST00000578789 TRIM77I1YAP6 450 aa11.87□□□□□ -0.51
MKS1-207ENST00000578789 GABRPO00591 440 aa11.87□□□□□ -0.51
MKS1-207ENST00000578789 MAGEB3O15480 346 aa11.87□□□□□ -0.51
MKS1-207ENST00000578789 IGHV1-69P01742 117 aa11.87□□□□□ -0.51
MKS1-207ENST00000578789 PRKACAP17612 351 aa11.87□□□□□ -0.51
MKS1-207ENST00000578789 CELP19835 753 aa11.87□□□□□ -0.51
MKS1-207ENST00000578789 CRHBPP24387 322 aa11.87□□□□□ -0.51
MKS1-207ENST00000578789 RPL31P62899 125 aaKnown RBP11.87□□□□□ -0.51
MKS1-207ENST00000578789 PPP3R1P63098 170 aa11.87□□□□□ -0.51
MKS1-207ENST00000578789 RUSC1-AS1Q66K80 236 aa11.87□□□□□ -0.51
MKS1-207ENST00000578789 C17orf107Q6ZR85 190 aa11.87□□□□□ -0.51
MKS1-207ENST00000578789 FAM185AQ8N0U4 392 aa11.87□□□□□ -0.51
MKS1-207ENST00000578789 OR8H2Q8N162 312 aa11.87□□□□□ -0.51
MKS1-207ENST00000578789 ASCC1Q8N9N2 400 aaKnown RBP11.87□□□□□ -0.51
MKS1-207ENST00000578789 OR52N4Q8NGI2 321 aa11.87□□□□□ -0.51
MKS1-207ENST00000578789 TNFRSF14Q92956 283 aa11.87□□□□□ -0.51
MKS1-207ENST00000578789 LHX4Q969G2 390 aa11.87□□□□□ -0.51
MKS1-207ENST00000578789 SNX22Q96L94 193 aa11.87□□□□□ -0.51
MKS1-207ENST00000578789 ZMAT3Q9HA38 289 aaKnown RBP11.87□□□□□ -0.51
MKS1-207ENST00000578789 SOX21Q9Y651 276 aaPredicted RBP11.87□□□□□ -0.51
MKS1-207ENST00000578789 PNMA8CA0A1B0GUJ8 204 aa11.86□□□□□ -0.51
MKS1-207ENST00000578789 TMEM225BP0DP42 221 aa11.86□□□□□ -0.51
MKS1-207ENST00000578789 PRTN3P24158 256 aa11.86□□□□□ -0.51
MKS1-207ENST00000578789 BDKRB2P30411 391 aa11.86□□□□□ -0.51
MKS1-207ENST00000578789 BMXP51813 675 aa11.86□□□□□ -0.51
MKS1-207ENST00000578789 GUCA2AQ02747 115 aa11.86□□□□□ -0.51
MKS1-207ENST00000578789 ELP2Q6IA86 826 aa11.86□□□□□ -0.51
MKS1-207ENST00000578789 RBMS3Q6XE24 437 aaKnown RBP11.86□□□□□ -0.51
MKS1-207ENST00000578789 TBC1D15Q8TC07 691 aa11.86□□□□□ -0.51
MKS1-207ENST00000578789 FAM216AQ8WUB2 273 aa11.86□□□□□ -0.51
MKS1-207ENST00000578789 THRSPQ92748 146 aa11.86□□□□□ -0.51
MKS1-207ENST00000578789 C1orf147Q96MC9 270 aaPredicted RBP11.86□□□□□ -0.51
MKS1-207ENST00000578789 OR14A2Q96R54 314 aa11.86□□□□□ -0.51
MKS1-207ENST00000578789 OR5M11Q96RB7 305 aa11.86□□□□□ -0.51
MKS1-207ENST00000578789 METTL8Q9H825 291 aaKnown RBP11.86□□□□□ -0.51
MKS1-207ENST00000578789 EXOSC4Q9NPD3 245 aaKnown RBP11.86□□□□□ -0.51
MKS1-207ENST00000578789 SIRT7Q9NRC8 400 aa11.86□□□□□ -0.51
MKS1-207ENST00000578789 GLS2Q9UI32 602 aa11.86□□□□□ -0.51
MKS1-207ENST00000578789 MDFIC2A0A1B0GVS7 189 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 A0A1W2PPH5 198 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 DNAJC9-AS1A6NH13 148 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 RNASEK-C17orf49H0YIS7 233 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 RGS10O43665 173 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 PSPNO60542 156 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 LMO1P25800 156 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 DUSP1P28562 367 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 MTNR1BP49286 362 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 UBA52P62987 128 aaKnown RBP11.85□□□□□ -0.51
MKS1-207ENST00000578789 BLMHQ13867 455 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 ZNF273Q14593 569 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 SPHARQ15513 63 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 DEFB112Q30KQ8 113 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 RBM48Q5RL73 367 aaKnown RBP11.85□□□□□ -0.51
MKS1-207ENST00000578789 DDI2Q5TDH0 399 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 NCR3LG1Q68D85 454 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 TMEM200BQ69YZ2 307 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 ASCL4Q6XD76 172 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.85□□□□□ -0.51
MKS1-207ENST00000578789 Q8NFD4 153 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 OR5D13Q8NGL4 314 aa11.85□□□□□ -0.51
MKS1-207ENST00000578789 TNFAIP8L1Q8WVP5 186 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms