RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 FAM90A20PA6NIJ5 464 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 FAM90A9PA6NNJ1 464 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 FAM90A12PA8MX19 464 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 FAM90A5PA8MXJ8 464 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 NXPH2O95156 264 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 HAND1O96004 215 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 RBP4P02753 201 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 ARG1P05089 322 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 SNRNP70P08621 437 aaKnown RBP3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 FAM90A15PP0C7V4 464 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 FAM90A13PP0C7W8 464 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 FAM90A14PP0C7W9 464 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 FAM90A24PP0C7X0 464 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 SNRPBP14678 240 aaKnown RBP3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 PAICSP22234 425 aaKnown RBP3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 EEF1B2P24534 225 aaKnown RBP3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 CD34P28906 385 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 HTR1FP30939 366 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 MNAT1P51948 309 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 RIDAP52758 137 aaKnown RBP3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 OR12D2P58182 307 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 RPS7P62081 194 aaKnown RBP3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 ESRRGP62508 458 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 ACTA2P62736 377 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 ACTG2P63267 376 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 ACTC1P68032 377 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 ACTA1P68133 377 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 EGFEM1PQ0D2K5 195 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 FLOT2Q14254 428 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 CNN3Q15417 329 aaKnown RBP3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 FAM189A2Q15884 450 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 SMIM21Q3B7S5 101 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 NSUN5P1Q3KNT7 163 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 NKAPLQ5M9Q1 402 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 BCL2L15Q5TBC7 163 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 PRAMEF5Q5TYX0 476 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 KCTD18Q6PI47 426 aaPredicted RBP3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 SPATA24Q86W54 205 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 ZNF573Q86YE8 665 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 OR4C13Q8NGP0 309 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 OR2G2Q8NGZ5 317 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 ZNF671Q8TAW3 534 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 PLPPR1Q8TBJ4 325 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 APH1BQ8WW43 257 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 ASB17Q8WXJ9 295 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 CORO2AQ92828 525 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 RFT1Q96AA3 541 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 MALSU1Q96EH3 234 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 PELI1Q96FA3 418 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 SNX22Q96L94 193 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 CEP19Q96LK0 163 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 MBOAT4Q96T53 435 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 OSBPL10Q9BXB5 764 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 MROQ9BYG7 248 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 LINC00574Q9H8X3 128 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 ISG20L2Q9H9L3 353 aaKnown RBP3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 HMG20AQ9NP66 347 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 IKZF2Q9UKS7 526 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 MYRFQ9Y2G1 1151 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 TBL2Q9Y4P3 447 aaKnown RBP3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 HILPDAQ9Y5L2 63 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 SNX5Q9Y5X3 404 aa3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 HUWE1Q7Z6Z7 4374 aaKnown RBP3.53□□□□□ -1.84
PPP4R1-209ENST00000578329 TRAV39A0A0B4J263 110 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 TRAV24A0A0B4J272 114 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 TRBV2A0A0J9YWF9 115 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 MAGEA13PA6NCF6 341 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 METTL15A6NJ78 407 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 SLC1A7O00341 560 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 SLC33A1O00400 549 aaPredicted RBP3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 GYG2O15488 501 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 FBXO24O75426 580 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 SULT1C4O75897 302 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 DNAJC8O75937 253 aaPredicted RBP3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 KDM4BO94953 1096 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 OR2H2O95918 312 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 PAHP00439 452 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 LALBAP00709 142 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 ISG15P05161 165 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 ALPLP05186 524 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 OR2T7P0C7T2 308 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 ATF1P18846 271 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 ERP29P30040 261 aaKnown RBP3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 VHLP40337 213 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 CAPZA1P52907 286 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 SNU13P55769 128 aaKnown RBP3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 P2RX3P56373 397 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 BDH1Q02338 343 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 MEF2CQ06413 473 aaPredicted RBP3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 AESQ08117 197 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 PDZK1IP1Q13113 114 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 IL18R1Q13478 541 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 KIAA0141Q14154 515 aaPredicted RBP3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 EDDM3AQ14507 147 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 ZNF829Q3KNS6 432 aaPredicted RBP3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 SLC25A30Q5SVS4 291 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 LAIR2Q6ISS4 152 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 UTS2BQ765I0 119 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 RTN4RL2Q86UN3 420 aa3.52□□□□□ -1.85
PPP4R1-209ENST00000578329 NDUFA11Q86Y39 141 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms