RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 CENPVL3A0A0U1RRI6 287 aa15.9■□□□□ 0.14
SS18-208ENST00000577751 MAGEB3O15480 346 aa15.9■□□□□ 0.14
SS18-208ENST00000577751 BPIFB3P59826 476 aa15.9■□□□□ 0.14
SS18-208ENST00000577751 HILS1P60008 231 aa15.9■□□□□ 0.14
SS18-208ENST00000577751 KRTAP24-1Q3LI83 254 aa15.9■□□□□ 0.14
SS18-208ENST00000577751 RBM48Q5RL73 367 aaKnown RBP15.9■□□□□ 0.14
SS18-208ENST00000577751 GPR157Q5UAW9 335 aa15.9■□□□□ 0.14
SS18-208ENST00000577751 C1orf122Q6ZSJ8 110 aa15.9■□□□□ 0.14
SS18-208ENST00000577751 PXT1Q8NFP0 134 aa15.9■□□□□ 0.14
SS18-208ENST00000577751 OR52N4Q8NGI2 321 aa15.9■□□□□ 0.14
SS18-208ENST00000577751 TMEM158Q8WZ71 300 aa15.9■□□□□ 0.14
SS18-208ENST00000577751 ORAI1Q96D31 301 aa15.9■□□□□ 0.14
SS18-208ENST00000577751 CPNE2Q96FN4 548 aaPredicted RBP15.9■□□□□ 0.14
SS18-208ENST00000577751 TMEM138Q9NPI0 162 aa15.9■□□□□ 0.14
SS18-208ENST00000577751 GABRPO00591 440 aa15.89■□□□□ 0.13
SS18-208ENST00000577751 RGS10O43665 173 aa15.89■□□□□ 0.13
SS18-208ENST00000577751 HAND1O96004 215 aa15.89■□□□□ 0.13
SS18-208ENST00000577751 TMEM225BP0DP42 221 aa15.89■□□□□ 0.13
SS18-208ENST00000577751 PRKACAP17612 351 aa15.89■□□□□ 0.13
SS18-208ENST00000577751 CAPZA1P52907 286 aa15.89■□□□□ 0.13
SS18-208ENST00000577751 SPIN3Q5JUX0 258 aa15.89■□□□□ 0.13
SS18-208ENST00000577751 FIP1L1Q6UN15 594 aaKnown RBP15.89■□□□□ 0.13
SS18-208ENST00000577751 ASCL4Q6XD76 172 aa15.89■□□□□ 0.13
SS18-208ENST00000577751 CMTM4Q8IZR5 234 aa15.89■□□□□ 0.13
SS18-208ENST00000577751 OR14A2Q96R54 314 aa15.89■□□□□ 0.13
SS18-208ENST00000577751 ZNF184Q99676 751 aaPredicted RBP15.89■□□□□ 0.13
SS18-208ENST00000577751 MS4A7Q9GZW8 240 aaPredicted RBP15.89■□□□□ 0.13
SS18-208ENST00000577751 C19orf12Q9NSK7 152 aa15.89■□□□□ 0.13
SS18-208ENST00000577751 ONECUT1Q9UBC0 465 aa15.89■□□□□ 0.13
SS18-208ENST00000577751 TMEM82A0PJX8 343 aa15.88■□□□□ 0.13
SS18-208ENST00000577751 M0R1W7 72 aa15.88■□□□□ 0.13
SS18-208ENST00000577751 CALCBP10092 127 aa15.88■□□□□ 0.13
SS18-208ENST00000577751 FSTP19883 344 aa15.88■□□□□ 0.13
SS18-208ENST00000577751 PPP3R1P63098 170 aa15.88■□□□□ 0.13
SS18-208ENST00000577751 GPR50Q13585 617 aa15.88■□□□□ 0.13
SS18-208ENST00000577751 MED22Q15528 200 aa15.88■□□□□ 0.13
SS18-208ENST00000577751 METAP1DQ6UB28 335 aaPredicted RBP15.88■□□□□ 0.13
SS18-208ENST00000577751 BRD3OSQ6XYD6 125 aa15.88■□□□□ 0.13
SS18-208ENST00000577751 C17orf107Q6ZR85 190 aa15.88■□□□□ 0.13
SS18-208ENST00000577751 PRSS48Q7RTY5 328 aa15.88■□□□□ 0.13
SS18-208ENST00000577751 VMO1Q7Z5L0 202 aa15.88■□□□□ 0.13
SS18-208ENST00000577751 SNX22Q96L94 193 aa15.88■□□□□ 0.13
SS18-208ENST00000577751 ZNF48Q96MX3 618 aaPredicted RBP15.88■□□□□ 0.13
SS18-208ENST00000577751 DERL3Q96Q80 235 aa15.88■□□□□ 0.13
SS18-208ENST00000577751 UNKLQ9H9P5 680 aaKnown RBP15.88■□□□□ 0.13
SS18-208ENST00000577751 SOX21Q9Y651 276 aaPredicted RBP15.88■□□□□ 0.13
SS18-208ENST00000577751 DSCAML1Q8TD84 2053 aa15.87■□□□□ 0.13
SS18-208ENST00000577751 TRAV8-7A0A075B6U6 113 aa15.87■□□□□ 0.13
SS18-208ENST00000577751 A0A1W2PQ09 198 aa15.87■□□□□ 0.13
SS18-208ENST00000577751 RNF212BA8MTL3 300 aa15.87■□□□□ 0.13
SS18-208ENST00000577751 PIN1P1O15428 100 aa15.87■□□□□ 0.13
SS18-208ENST00000577751 DENRO43583 198 aaKnown RBP15.87■□□□□ 0.13
SS18-208ENST00000577751 RGS9O75916 674 aaPredicted RBP15.87■□□□□ 0.13
SS18-208ENST00000577751 DUSP1P28562 367 aa15.87■□□□□ 0.13
SS18-208ENST00000577751 BDKRB2P30411 391 aa15.87■□□□□ 0.13
SS18-208ENST00000577751 TGFBR2P37173 567 aa15.87■□□□□ 0.13
SS18-208ENST00000577751 RPL31P62899 125 aaKnown RBP15.87■□□□□ 0.13
SS18-208ENST00000577751 TMEM200BQ69YZ2 307 aa15.87■□□□□ 0.13
SS18-208ENST00000577751 ELP2Q6IA86 826 aa15.87■□□□□ 0.13
SS18-208ENST00000577751 SATL1Q86VE3 508 aa15.87■□□□□ 0.13
SS18-208ENST00000577751 OR8H2Q8N162 312 aa15.87■□□□□ 0.13
SS18-208ENST00000577751 MS4A15Q8N5U1 240 aa15.87■□□□□ 0.13
SS18-208ENST00000577751 ASCC1Q8N9N2 400 aaKnown RBP15.87■□□□□ 0.13
SS18-208ENST00000577751 Q8NFD4 153 aa15.87■□□□□ 0.13
SS18-208ENST00000577751 OR5D13Q8NGL4 314 aa15.87■□□□□ 0.13
SS18-208ENST00000577751 TBC1D15Q8TC07 691 aa15.87■□□□□ 0.13
SS18-208ENST00000577751 TNFRSF14Q92956 283 aa15.87■□□□□ 0.13
SS18-208ENST00000577751 LHX4Q969G2 390 aa15.87■□□□□ 0.13
SS18-208ENST00000577751 GPER1Q99527 375 aa15.87■□□□□ 0.13
SS18-208ENST00000577751 ESM1Q9NQ30 184 aa15.87■□□□□ 0.13
SS18-208ENST00000577751 FOXJ3Q9UPW0 622 aa15.87■□□□□ 0.13
SS18-208ENST00000577751 IGHV1-69DA0A0B4J2H0 117 aa15.86■□□□□ 0.13
SS18-208ENST00000577751 PSPNO60542 156 aa15.86■□□□□ 0.13
SS18-208ENST00000577751 IGHV1-69P01742 117 aa15.86■□□□□ 0.13
SS18-208ENST00000577751 LMO1P25800 156 aa15.86■□□□□ 0.13
SS18-208ENST00000577751 ZNF93P35789 620 aaPredicted RBP15.86■□□□□ 0.13
SS18-208ENST00000577751 MTNR1BP49286 362 aa15.86■□□□□ 0.13
SS18-208ENST00000577751 DDI2Q5TDH0 399 aa15.86■□□□□ 0.13
SS18-208ENST00000577751 UNQ9370/PRO34162Q6UXP9 181 aa15.86■□□□□ 0.13
SS18-208ENST00000577751 FAM185AQ8N0U4 392 aa15.86■□□□□ 0.13
SS18-208ENST00000577751 C11orf42Q8N5U0 333 aa15.86■□□□□ 0.13
SS18-208ENST00000577751 SIGLECL1Q8N7X8 197 aa15.86■□□□□ 0.13
SS18-208ENST00000577751 ZDHHC22Q8N966 263 aa15.86■□□□□ 0.13
SS18-208ENST00000577751 OR4M1Q8NGD0 313 aa15.86■□□□□ 0.13
SS18-208ENST00000577751 ZFAND2BQ8WV99 257 aa15.86■□□□□ 0.13
SS18-208ENST00000577751 TNFAIP8L1Q8WVP5 186 aa15.86■□□□□ 0.13
SS18-208ENST00000577751 THRSPQ92748 146 aa15.86■□□□□ 0.13
SS18-208ENST00000577751 JMJD8Q96S16 334 aa15.86■□□□□ 0.13
SS18-208ENST00000577751 PRDM13Q9H4Q3 707 aa15.86■□□□□ 0.13
SS18-208ENST00000577751 ISYNA1Q9NPH2 558 aa15.86■□□□□ 0.13
SS18-208ENST00000577751 CKLFQ9UBR5 152 aa15.86■□□□□ 0.13
SS18-208ENST00000577751 GLS2Q9UI32 602 aa15.86■□□□□ 0.13
SS18-208ENST00000577751 GSTK1Q9Y2Q3 226 aa15.86■□□□□ 0.13
SS18-208ENST00000577751 A0A1W2PPK0 400 aa15.85■□□□□ 0.13
SS18-208ENST00000577751 MAGEA13PA6NCF6 341 aa15.85■□□□□ 0.13
SS18-208ENST00000577751 SH2D1BO14796 132 aa15.85■□□□□ 0.13
SS18-208ENST00000577751 PRTN3P24158 256 aa15.85■□□□□ 0.13
SS18-208ENST00000577751 PTGFRP43088 359 aa15.85■□□□□ 0.13
SS18-208ENST00000577751 OR3A4PP47883 348 aa15.85■□□□□ 0.13
SS18-208ENST00000577751 BMXP51813 675 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms