RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 IDNKQ5T6J7 187 aa2.02□□□□□ -2.09
CDC27-219ENST00000576484 SYT6Q5T7P8 510 aaPredicted RBP2.02□□□□□ -2.09
CDC27-219ENST00000576484 AMN1Q8IY45 258 aa2.02□□□□□ -2.09
CDC27-219ENST00000576484 ZFP82Q8N141 532 aa2.02□□□□□ -2.09
CDC27-219ENST00000576484 EIF4E3Q8N5X7 224 aaKnown RBP2.02□□□□□ -2.09
CDC27-219ENST00000576484 CIDECQ96AQ7 238 aaPredicted RBP2.02□□□□□ -2.09
CDC27-219ENST00000576484 RILPQ96NA2 401 aa2.02□□□□□ -2.09
CDC27-219ENST00000576484 QKIQ96PU8 341 aaKnown RBP eCLIP2.02□□□□□ -2.09
CDC27-219ENST00000576484 TRAPPC1Q9Y5R8 145 aa2.02□□□□□ -2.09
CDC27-219ENST00000576484 MYO16Q9Y6X6 1858 aa2.02□□□□□ -2.09
CDC27-219ENST00000576484 PLXNB1O43157 2135 aa2.02□□□□□ -2.09
CDC27-219ENST00000576484 IGHV3-43A0A0B4J1X8 118 aa2.01□□□□□ -2.09
CDC27-219ENST00000576484 LOC389332A0A1B0GUA5 103 aa2.01□□□□□ -2.09
CDC27-219ENST00000576484 ANKRD20A5PA0PJZ0 165 aa2.01□□□□□ -2.09
CDC27-219ENST00000576484 KDELR3O43731 214 aa2.01□□□□□ -2.09
CDC27-219ENST00000576484 SYNGR2O43760 224 aa2.01□□□□□ -2.09
CDC27-219ENST00000576484 DEDDO75618 318 aa2.01□□□□□ -2.09
CDC27-219ENST00000576484 MBP02144 154 aa2.01□□□□□ -2.09
CDC27-219ENST00000576484 STAG3L2P0CL84 134 aa2.01□□□□□ -2.09
CDC27-219ENST00000576484 LIPCP11150 499 aa2.01□□□□□ -2.09
CDC27-219ENST00000576484 PTHLHP12272 177 aa2.01□□□□□ -2.09
CDC27-219ENST00000576484 HTR2BP41595 481 aa2.01□□□□□ -2.09
CDC27-219ENST00000576484 C16orf87Q6PH81 154 aa2.01□□□□□ -2.09
CDC27-219ENST00000576484 COMTD1Q86VU5 262 aa2.01□□□□□ -2.09
CDC27-219ENST00000576484 NELFCDQ8IXH7 590 aa2.01□□□□□ -2.09
CDC27-219ENST00000576484 OR8A1Q8NGG7 326 aa2.01□□□□□ -2.09
CDC27-219ENST00000576484 FAM131CQ96AQ9 280 aa2.01□□□□□ -2.09
CDC27-219ENST00000576484 TXNIPQ9H3M7 391 aa2.01□□□□□ -2.09
CDC27-219ENST00000576484 GAL3ST2Q9H3Q3 398 aa2.01□□□□□ -2.09
CDC27-219ENST00000576484 AP3M1Q9Y2T2 418 aa2.01□□□□□ -2.09
CDC27-219ENST00000576484 IGHV3-21A0A0B4J1V1 117 aa2□□□□□ -2.09
CDC27-219ENST00000576484 A0A0B4J2C4 111 aa2□□□□□ -2.09
CDC27-219ENST00000576484 GSTTP1A0A1W2PQM5 241 aa2□□□□□ -2.09
CDC27-219ENST00000576484 TVP23AA6NH52 213 aa2□□□□□ -2.09
CDC27-219ENST00000576484 BOLA2-SMG1P6H3BVE0 249 aa2□□□□□ -2.09
CDC27-219ENST00000576484 K7EN84 100 aa2□□□□□ -2.09
CDC27-219ENST00000576484 TCAPO15273 167 aa2□□□□□ -2.09
CDC27-219ENST00000576484 SPOPO43791 374 aa2□□□□□ -2.09
CDC27-219ENST00000576484 SLC37A4O43826 429 aa2□□□□□ -2.09
CDC27-219ENST00000576484 CSTAP01040 98 aa2□□□□□ -2.09
CDC27-219ENST00000576484 RLN2P04090 185 aa2□□□□□ -2.09
CDC27-219ENST00000576484 HOXB8P17481 243 aaPredicted RBP2□□□□□ -2.09
CDC27-219ENST00000576484 IMPA1P29218 277 aa2□□□□□ -2.09
CDC27-219ENST00000576484 FUSP35637 526 aaKnown RBP eCLIP2□□□□□ -2.09
CDC27-219ENST00000576484 LINC00596Q86U02 117 aa2□□□□□ -2.09
CDC27-219ENST00000576484 LYPD6Q86Y78 171 aa2□□□□□ -2.09
CDC27-219ENST00000576484 CA13Q8N1Q1 262 aa2□□□□□ -2.09
CDC27-219ENST00000576484 RPRMLQ8N4K4 120 aa2□□□□□ -2.09
CDC27-219ENST00000576484 C22orf15Q8WYQ4 148 aa2□□□□□ -2.09
CDC27-219ENST00000576484 OR2M4Q96R27 311 aa2□□□□□ -2.09
CDC27-219ENST00000576484 C12orf4Q9NQ89 552 aa2□□□□□ -2.09
CDC27-219ENST00000576484 ANXA10Q9UJ72 324 aa2□□□□□ -2.09
CDC27-219ENST00000576484 ZNF443Q9Y2A4 671 aaPredicted RBP2□□□□□ -2.09
CDC27-219ENST00000576484 OR2AT4A6NND4 320 aa1.99□□□□□ -2.09
CDC27-219ENST00000576484 A8MWP4 228 aa1.99□□□□□ -2.09
CDC27-219ENST00000576484 ZNF593O00488 134 aaPredicted RBP1.99□□□□□ -2.09
CDC27-219ENST00000576484 GATCO43716 136 aaKnown RBP1.99□□□□□ -2.09
CDC27-219ENST00000576484 IGKV1D-33P01593 117 aa1.99□□□□□ -2.09
CDC27-219ENST00000576484 IGKV1-33P01594 117 aa1.99□□□□□ -2.09
CDC27-219ENST00000576484 S100A9P06702 114 aaKnown RBP1.99□□□□□ -2.09
CDC27-219ENST00000576484 TAC1P20366 129 aa1.99□□□□□ -2.09
CDC27-219ENST00000576484 NUP62P37198 522 aaPredicted RBP1.99□□□□□ -2.09
CDC27-219ENST00000576484 CPNE9Q8IYJ1 553 aa1.99□□□□□ -2.09
CDC27-219ENST00000576484 FAM58AQ8N1B3 248 aa1.99□□□□□ -2.09
CDC27-219ENST00000576484 GAPTQ8N292 157 aa1.99□□□□□ -2.09
CDC27-219ENST00000576484 OR13C9Q8NGT0 318 aa1.99□□□□□ -2.09
CDC27-219ENST00000576484 PHOSPHO2Q8TCD6 241 aa1.99□□□□□ -2.09
CDC27-219ENST00000576484 C2orf15Q8WU43 125 aaKnown RBP1.99□□□□□ -2.09
CDC27-219ENST00000576484 SLC25A44Q96H78 314 aaPredicted RBP1.99□□□□□ -2.09
CDC27-219ENST00000576484 STACQ99469 402 aa1.99□□□□□ -2.09
CDC27-219ENST00000576484 SDHAF3Q9NRP4 125 aa1.99□□□□□ -2.09
CDC27-219ENST00000576484 RBM12B-AS1Q9P1G2 102 aa1.99□□□□□ -2.09
CDC27-219ENST00000576484 FLVCR2Q9UPI3 526 aa1.99□□□□□ -2.09
CDC27-219ENST00000576484 BZW2Q9Y6E2 419 aaKnown RBP1.99□□□□□ -2.09
CDC27-219ENST00000576484 V9GYY9 64 aa1.99□□□□□ -2.09
CDC27-219ENST00000576484 A0A1W2PNM2 257 aa1.98□□□□□ -2.09
CDC27-219ENST00000576484 SLC5A10A0PJK1 596 aa1.98□□□□□ -2.09
CDC27-219ENST00000576484 FAM25EA8MYX2 175 aa1.98□□□□□ -2.09
CDC27-219ENST00000576484 K7ERS5 55 aa1.98□□□□□ -2.09
CDC27-219ENST00000576484 GYG2O15488 501 aa1.98□□□□□ -2.09
CDC27-219ENST00000576484 COX7A2P2O60397 106 aa1.98□□□□□ -2.09
CDC27-219ENST00000576484 IVLP07476 585 aa1.98□□□□□ -2.09
CDC27-219ENST00000576484 CGB3P0DN86 165 aa1.98□□□□□ -2.09
CDC27-219ENST00000576484 CGB7P0DN87 165 aa1.98□□□□□ -2.09
CDC27-219ENST00000576484 PTNP21246 168 aa1.98□□□□□ -2.09
CDC27-219ENST00000576484 GPR4P46093 362 aa1.98□□□□□ -2.09
CDC27-219ENST00000576484 PSMD8P48556 350 aa1.98□□□□□ -2.09
CDC27-219ENST00000576484 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
CDC27-219ENST00000576484 ATP6AP1LQ52LC2 224 aa1.98□□□□□ -2.09
CDC27-219ENST00000576484 SLC25A25Q6KCM7 469 aa1.98□□□□□ -2.09
CDC27-219ENST00000576484 ZNF773Q6PK81 442 aa1.98□□□□□ -2.09
CDC27-219ENST00000576484 Q6ZQT7 251 aa1.98□□□□□ -2.09
CDC27-219ENST00000576484 ATPAF2Q8N5M1 289 aa1.98□□□□□ -2.09
CDC27-219ENST00000576484 ADTRPQ96IZ2 230 aa1.98□□□□□ -2.09
CDC27-219ENST00000576484 MAP1LC3CQ9BXW4 147 aa1.98□□□□□ -2.09
CDC27-219ENST00000576484 TM6SF2Q9BZW4 377 aa1.98□□□□□ -2.09
CDC27-219ENST00000576484 TSGA10Q9BZW7 698 aa1.98□□□□□ -2.09
CDC27-219ENST00000576484 AQRO60306 1485 aaKnown RBP eCLIP1.98□□□□□ -2.098e-7■□□□□ 11.3
CDC27-219ENST00000576484 SPATA31E1Q6ZUB1 1445 aa1.98□□□□□ -2.09
CDC27-219ENST00000576484 PLXNB3Q9ULL4 1909 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms