RNA–Protein interactions for RNA: ENST00000574205.5

CTDNEP1-209, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 1,506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-209ENST00000574205 STUB1Q9UNE7 303 aa27.5■■□□□ 1.99
CTDNEP1-209ENST00000574205 A0A0G2JMP0 313 aa27.49■■□□□ 1.99
CTDNEP1-209ENST00000574205 A0A0X1KG70 313 aa27.49■■□□□ 1.99
CTDNEP1-209ENST00000574205 GPR37O15354 613 aa27.49■■□□□ 1.99
CTDNEP1-209ENST00000574205 SELLP14151 372 aa27.49■■□□□ 1.99
CTDNEP1-209ENST00000574205 MTNR1BP49286 362 aa27.49■■□□□ 1.99
CTDNEP1-209ENST00000574205 CEBPDP49716 269 aaPredicted RBP27.49■■□□□ 1.99
CTDNEP1-209ENST00000574205 CD276Q5ZPR3 534 aa27.49■■□□□ 1.99
CTDNEP1-209ENST00000574205 OR4M2Q8NGB6 313 aa27.49■■□□□ 1.99
CTDNEP1-209ENST00000574205 METTL9Q9H1A3 318 aa27.49■■□□□ 1.99
CTDNEP1-209ENST00000574205 CDRT1O95170 752 aa27.48■■□□□ 1.99
CTDNEP1-209ENST00000574205 CALCBP10092 127 aa27.48■■□□□ 1.99
CTDNEP1-209ENST00000574205 FGF12P61328 243 aa27.48■■□□□ 1.99
CTDNEP1-209ENST00000574205 DCAF12L2Q5VW00 463 aa27.48■■□□□ 1.99
CTDNEP1-209ENST00000574205 Q8NFD4 153 aa27.48■■□□□ 1.99
CTDNEP1-209ENST00000574205 ST8SIA4Q92187 359 aa27.48■■□□□ 1.99
CTDNEP1-209ENST00000574205 MMP26Q9NRE1 261 aa27.48■■□□□ 1.99
CTDNEP1-209ENST00000574205 TMEM160Q9NX00 188 aa27.48■■□□□ 1.99
CTDNEP1-209ENST00000574205 SLC25A10Q9UBX3 287 aaPredicted RBP27.48■■□□□ 1.99
CTDNEP1-209ENST00000574205 GLS2Q9UI32 602 aa27.48■■□□□ 1.99
CTDNEP1-209ENST00000574205 ING4Q9UNL4 249 aa27.48■■□□□ 1.99
CTDNEP1-209ENST00000574205 LOC105371242A0A075B767 164 aa27.47■■□□□ 1.99
CTDNEP1-209ENST00000574205 JUNBP17275 347 aaPredicted RBP27.47■■□□□ 1.99
CTDNEP1-209ENST00000574205 GSTK1Q9Y2Q3 226 aa27.47■■□□□ 1.99
CTDNEP1-209ENST00000574205 MRPS28Q9Y2Q9 187 aaKnown RBP27.47■■□□□ 1.99
CTDNEP1-209ENST00000574205 ZNF780AO75290 641 aaPredicted RBP27.46■■□□□ 1.99
CTDNEP1-209ENST00000574205 CHRM2P08172 466 aa27.46■■□□□ 1.99
CTDNEP1-209ENST00000574205 FGF9P31371 208 aaPredicted RBP27.46■■□□□ 1.99
CTDNEP1-209ENST00000574205 CAV3P56539 151 aa27.46■■□□□ 1.99
CTDNEP1-209ENST00000574205 PAX2Q02962 417 aa27.46■■□□□ 1.99
CTDNEP1-209ENST00000574205 TMEM185AQ8NFB2 350 aa27.46■■□□□ 1.99
CTDNEP1-209ENST00000574205 OR4D6Q8NGJ1 314 aa27.46■■□□□ 1.99
CTDNEP1-209ENST00000574205 OR10K1Q8NGX5 313 aa27.46■■□□□ 1.99
CTDNEP1-209ENST00000574205 ECDO95905 644 aaPredicted RBP27.46■■□□□ 1.99
CTDNEP1-209ENST00000574205 HAND1O96004 215 aa27.46■■□□□ 1.99
CTDNEP1-209ENST00000574205 CD36P16671 472 aa27.46■■□□□ 1.99
CTDNEP1-209ENST00000574205 SNU13P55769 128 aaKnown RBP27.46■■□□□ 1.99
CTDNEP1-209ENST00000574205 AWAT2Q6E213 333 aa27.46■■□□□ 1.99
CTDNEP1-209ENST00000574205 FGFRL1Q8N441 504 aa27.46■■□□□ 1.99
CTDNEP1-209ENST00000574205 RAB40AQ8WXH6 277 aa27.46■■□□□ 1.99
CTDNEP1-209ENST00000574205 DACT3Q96B18 629 aaPredicted RBP27.46■■□□□ 1.99
CTDNEP1-209ENST00000574205 PCDHB16Q9NRJ7 776 aa27.46■■□□□ 1.99
CTDNEP1-209ENST00000574205 METRNQ9UJH8 293 aa27.46■■□□□ 1.99
CTDNEP1-209ENST00000574205 SSR3Q9UNL2 185 aa27.46■■□□□ 1.99
CTDNEP1-209ENST00000574205 SVEP1Q4LDE5 3571 aa27.45■■□□□ 1.98
CTDNEP1-209ENST00000574205 IGHV2-70DA0A0C4DH43 119 aa27.45■■□□□ 1.98
CTDNEP1-209ENST00000574205 CSTBP04080 98 aaKnown RBP27.45■■□□□ 1.98
CTDNEP1-209ENST00000574205 SMIM18P0DKX4 95 aa27.45■■□□□ 1.98
CTDNEP1-209ENST00000574205 CD37P11049 281 aa27.45■■□□□ 1.98
CTDNEP1-209ENST00000574205 DUSP1P28562 367 aa27.45■■□□□ 1.98
CTDNEP1-209ENST00000574205 COL10A1Q03692 680 aa27.45■■□□□ 1.98
CTDNEP1-209ENST00000574205 GPR176Q14439 515 aa27.45■■□□□ 1.98
CTDNEP1-209ENST00000574205 C22orf42Q6IC83 251 aa27.45■■□□□ 1.98
CTDNEP1-209ENST00000574205 FAHD2BQ6P2I3 314 aaPredicted RBP27.45■■□□□ 1.98
CTDNEP1-209ENST00000574205 BTN2A1Q7KYR7 527 aa27.45■■□□□ 1.98
CTDNEP1-209ENST00000574205 FAHD2AQ96GK7 314 aa27.45■■□□□ 1.98
CTDNEP1-209ENST00000574205 EXOSC4Q9NPD3 245 aaKnown RBP27.45■■□□□ 1.98
CTDNEP1-209ENST00000574205 TXNL4BQ9NX01 149 aaKnown RBP27.45■■□□□ 1.98
CTDNEP1-209ENST00000574205 INSIG2Q9Y5U4 225 aa27.45■■□□□ 1.98
CTDNEP1-209ENST00000574205 TRAV1-2A0A0B4J238 106 aa27.44■■□□□ 1.98
CTDNEP1-209ENST00000574205 C22orf46C9J442 243 aa27.44■■□□□ 1.98
CTDNEP1-209ENST00000574205 HTR3BO95264 441 aa27.44■■□□□ 1.98
CTDNEP1-209ENST00000574205 MYL9P24844 172 aa27.44■■□□□ 1.98
CTDNEP1-209ENST00000574205 CR1LQ2VPA4 569 aa27.44■■□□□ 1.98
CTDNEP1-209ENST00000574205 GLIPR1L1Q6UWM5 242 aa27.44■■□□□ 1.98
CTDNEP1-209ENST00000574205 BTNL3Q6UXE8 466 aa27.44■■□□□ 1.98
CTDNEP1-209ENST00000574205 OR51T1Q8NGJ9 327 aa27.44■■□□□ 1.98
CTDNEP1-209ENST00000574205 TBC1D15Q8TC07 691 aa27.44■■□□□ 1.98
CTDNEP1-209ENST00000574205 FAM234AQ9H0X4 552 aa27.44■■□□□ 1.98
CTDNEP1-209ENST00000574205 INAFM1C9JVW0 142 aa27.43■■□□□ 1.98
CTDNEP1-209ENST00000574205 J3QLI3 93 aa27.43■■□□□ 1.98
CTDNEP1-209ENST00000574205 SH2D1BO14796 132 aa27.43■■□□□ 1.98
CTDNEP1-209ENST00000574205 ENSAO43768 121 aaKnown RBP27.43■■□□□ 1.98
CTDNEP1-209ENST00000574205 C1orf100Q5SVJ3 147 aa27.43■■□□□ 1.98
CTDNEP1-209ENST00000574205 ASCC1Q8N9N2 400 aaKnown RBP27.43■■□□□ 1.98
CTDNEP1-209ENST00000574205 NUDT16L1Q9BRJ7 211 aaKnown RBP27.43■■□□□ 1.98
CTDNEP1-209ENST00000574205 OR51E2Q9H255 320 aa27.43■■□□□ 1.98
CTDNEP1-209ENST00000574205 AK6Q9Y3D8 172 aaKnown RBP27.43■■□□□ 1.98
CTDNEP1-209ENST00000574205 FN1P02751 2386 aaKnown RBP27.43■■□□□ 1.98
CTDNEP1-209ENST00000574205 NDUFB7P17568 137 aa27.42■■□□□ 1.98
CTDNEP1-209ENST00000574205 SERPINA2P20848 420 aa27.42■■□□□ 1.98
CTDNEP1-209ENST00000574205 CAPZA1P52907 286 aa27.42■■□□□ 1.98
CTDNEP1-209ENST00000574205 SLC22A6Q4U2R8 563 aa27.42■■□□□ 1.98
CTDNEP1-209ENST00000574205 GHRLQ9UBU3 117 aa27.42■■□□□ 1.98
CTDNEP1-209ENST00000574205 KIR2DS1A0A191URI9 304 aa27.41■■□□□ 1.98
CTDNEP1-209ENST00000574205 K7N7A8 449 aa27.41■■□□□ 1.98
CTDNEP1-209ENST00000574205 ZNF737O75373 536 aa27.41■■□□□ 1.98
CTDNEP1-209ENST00000574205 TK1P04183 234 aa27.41■■□□□ 1.98
CTDNEP1-209ENST00000574205 PSMD7P51665 324 aa27.41■■□□□ 1.98
CTDNEP1-209ENST00000574205 OSR2Q8N2R0 312 aa27.41■■□□□ 1.98
CTDNEP1-209ENST00000574205 C1orf147Q96MC9 270 aaPredicted RBP27.41■■□□□ 1.98
CTDNEP1-209ENST00000574205 GFI1Q99684 422 aa27.41■■□□□ 1.98
CTDNEP1-209ENST00000574205 RPUSD1Q9UJJ7 312 aaKnown RBP27.41■■□□□ 1.98
CTDNEP1-209ENST00000574205 GADD45AP24522 165 aa27.41■■□□□ 1.98
CTDNEP1-209ENST00000574205 IL13RA2Q14627 380 aa27.41■■□□□ 1.98
CTDNEP1-209ENST00000574205 NHLRC3Q5JS37 347 aa27.41■■□□□ 1.98
CTDNEP1-209ENST00000574205 H1FXQ92522 213 aaKnown RBP27.41■■□□□ 1.98
CTDNEP1-209ENST00000574205 SNX22Q96L94 193 aa27.41■■□□□ 1.98
CTDNEP1-209ENST00000574205 CHCHD6Q9BRQ6 235 aa27.41■■□□□ 1.98
CTDNEP1-209ENST00000574205 DCTN5Q9BTE1 182 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms