RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 LALBAP00709 142 aa11.52□□□□□ -0.57
RPAIN-211ENST00000572174 TK1P04183 234 aa11.52□□□□□ -0.57
RPAIN-211ENST00000572174 DUX4L2P0CJ85 424 aa11.52□□□□□ -0.57
RPAIN-211ENST00000572174 DUX4L3P0CJ86 424 aa11.52□□□□□ -0.57
RPAIN-211ENST00000572174 DUX4L4P0CJ87 422 aa11.52□□□□□ -0.57
RPAIN-211ENST00000572174 DUX4L5P0CJ88 424 aa11.52□□□□□ -0.57
RPAIN-211ENST00000572174 DUX4L6P0CJ89 424 aa11.52□□□□□ -0.57
RPAIN-211ENST00000572174 DUX4L7P0CJ90 424 aa11.52□□□□□ -0.57
RPAIN-211ENST00000572174 PRKACAP17612 351 aa11.52□□□□□ -0.57
RPAIN-211ENST00000572174 BCL3P20749 454 aa11.52□□□□□ -0.57
RPAIN-211ENST00000572174 HILS1P60008 231 aa11.52□□□□□ -0.57
RPAIN-211ENST00000572174 GABARAPL2P60520 117 aa11.52□□□□□ -0.57
RPAIN-211ENST00000572174 RPL31P62899 125 aaKnown RBP11.52□□□□□ -0.57
RPAIN-211ENST00000572174 DOC2BQ14184 412 aa11.52□□□□□ -0.57
RPAIN-211ENST00000572174 DDI2Q5TDH0 399 aa11.52□□□□□ -0.57
RPAIN-211ENST00000572174 DUX4L9Q6RFH8 374 aaPredicted RBP11.52□□□□□ -0.57
RPAIN-211ENST00000572174 SATL1Q86VE3 508 aa11.52□□□□□ -0.57
RPAIN-211ENST00000572174 CDH26Q8IXH8 852 aa11.52□□□□□ -0.57
RPAIN-211ENST00000572174 FAM185AQ8N0U4 392 aa11.52□□□□□ -0.57
RPAIN-211ENST00000572174 OR8H2Q8N162 312 aa11.52□□□□□ -0.57
RPAIN-211ENST00000572174 CD177Q8N6Q3 437 aa11.52□□□□□ -0.57
RPAIN-211ENST00000572174 ZFP41Q8N8Y5 198 aa11.52□□□□□ -0.57
RPAIN-211ENST00000572174 SNX22Q96L94 193 aa11.52□□□□□ -0.57
RPAIN-211ENST00000572174 CCDC90BQ9GZT6 254 aa11.52□□□□□ -0.57
RPAIN-211ENST00000572174 FAM192AQ9GZU8 254 aa11.52□□□□□ -0.57
RPAIN-211ENST00000572174 METTL8Q9H825 291 aaKnown RBP11.52□□□□□ -0.57
RPAIN-211ENST00000572174 HMG20AQ9NP66 347 aa11.52□□□□□ -0.57
RPAIN-211ENST00000572174 EXOSC4Q9NPD3 245 aaKnown RBP11.52□□□□□ -0.57
RPAIN-211ENST00000572174 ISYNA1Q9NPH2 558 aa11.52□□□□□ -0.57
RPAIN-211ENST00000572174 DUX4Q9UBX2 424 aa11.52□□□□□ -0.57
RPAIN-211ENST00000572174 SIRT4Q9Y6E7 314 aaPredicted RBP11.52□□□□□ -0.57
RPAIN-211ENST00000572174 KIAA2026Q5HYC2 2103 aa11.51□□□□□ -0.57
RPAIN-211ENST00000572174 PNMA8CA0A1B0GUJ8 204 aa11.51□□□□□ -0.57
RPAIN-211ENST00000572174 MEGF11A6BM72 1044 aa11.51□□□□□ -0.57
RPAIN-211ENST00000572174 SELLP14151 372 aa11.51□□□□□ -0.57
RPAIN-211ENST00000572174 MMP9P14780 707 aa11.51□□□□□ -0.57
RPAIN-211ENST00000572174 ZNF93P35789 620 aaPredicted RBP11.51□□□□□ -0.57
RPAIN-211ENST00000572174 ZP1P60852 638 aa11.51□□□□□ -0.57
RPAIN-211ENST00000572174 ARF6P62330 175 aa11.51□□□□□ -0.57
RPAIN-211ENST00000572174 COL10A1Q03692 680 aa11.51□□□□□ -0.57
RPAIN-211ENST00000572174 GPR176Q14439 515 aa11.51□□□□□ -0.57
RPAIN-211ENST00000572174 IRF3Q14653 427 aa11.51□□□□□ -0.57
RPAIN-211ENST00000572174 RSU1Q15404 277 aa11.51□□□□□ -0.57
RPAIN-211ENST00000572174 TBCEQ15813 527 aaPredicted RBP11.51□□□□□ -0.57
RPAIN-211ENST00000572174 ELP2Q6IA86 826 aa11.51□□□□□ -0.57
RPAIN-211ENST00000572174 SVOPQ8N4V2 548 aa11.51□□□□□ -0.57
RPAIN-211ENST00000572174 OR5D18Q8NGL1 313 aa11.51□□□□□ -0.57
RPAIN-211ENST00000572174 TNFAIP8L1Q8WVP5 186 aa11.51□□□□□ -0.57
RPAIN-211ENST00000572174 RFT1Q96AA3 541 aa11.51□□□□□ -0.57
RPAIN-211ENST00000572174 SPACA5Q96QH8 159 aa11.51□□□□□ -0.57
RPAIN-211ENST00000572174 OR14A2Q96R54 314 aa11.51□□□□□ -0.57
RPAIN-211ENST00000572174 YTHDF1Q9BYJ9 559 aaKnown RBP11.51□□□□□ -0.57
RPAIN-211ENST00000572174 ELL3Q9HB65 397 aaPredicted RBP11.51□□□□□ -0.57
RPAIN-211ENST00000572174 RBFOX1Q9NWB1 397 aaKnown RBP11.51□□□□□ -0.57
RPAIN-211ENST00000572174 TRBV5-7A0A0A0MS05 114 aa11.5□□□□□ -0.57
RPAIN-211ENST00000572174 RNF212BA8MTL3 300 aa11.5□□□□□ -0.57
RPAIN-211ENST00000572174 MGST3O14880 152 aa11.5□□□□□ -0.57
RPAIN-211ENST00000572174 DENRO43583 198 aaKnown RBP11.5□□□□□ -0.57
RPAIN-211ENST00000572174 RBP4P02753 201 aa11.5□□□□□ -0.57
RPAIN-211ENST00000572174 CSTBP04080 98 aaKnown RBP11.5□□□□□ -0.57
RPAIN-211ENST00000572174 IGFBP3P17936 291 aaPredicted RBP11.5□□□□□ -0.57
RPAIN-211ENST00000572174 TGFBR2P37173 567 aa11.5□□□□□ -0.57
RPAIN-211ENST00000572174 RPS11P62280 158 aaKnown RBP eCLIP11.5□□□□□ -0.57
RPAIN-211ENST00000572174 MEF2CQ06413 473 aaPredicted RBP11.5□□□□□ -0.57
RPAIN-211ENST00000572174 MLLT11Q13015 90 aaPredicted RBP11.5□□□□□ -0.57
RPAIN-211ENST00000572174 IL13RA2Q14627 380 aa11.5□□□□□ -0.57
RPAIN-211ENST00000572174 KLF17Q5JT82 389 aaPredicted RBP11.5□□□□□ -0.57
RPAIN-211ENST00000572174 VMO1Q7Z5L0 202 aa11.5□□□□□ -0.57
RPAIN-211ENST00000572174 LINC00596Q86U02 117 aa11.5□□□□□ -0.57
RPAIN-211ENST00000572174 OR51A2Q8NGJ7 313 aa11.5□□□□□ -0.57
RPAIN-211ENST00000572174 PHYHIPQ92561 330 aa11.5□□□□□ -0.57
RPAIN-211ENST00000572174 DERL3Q96Q80 235 aa11.5□□□□□ -0.57
RPAIN-211ENST00000572174 SLC6A7Q99884 636 aa11.5□□□□□ -0.57
RPAIN-211ENST00000572174 SLITRK2Q9H156 845 aa11.5□□□□□ -0.57
RPAIN-211ENST00000572174 METTL9Q9H1A3 318 aa11.5□□□□□ -0.57
RPAIN-211ENST00000572174 UNKLQ9H9P5 680 aaKnown RBP11.5□□□□□ -0.57
RPAIN-211ENST00000572174 IL36GQ9NZH8 169 aa11.5□□□□□ -0.57
RPAIN-211ENST00000572174 LSM2Q9Y333 95 aaKnown RBP11.5□□□□□ -0.57
RPAIN-211ENST00000572174 IGHV1-69DA0A0B4J2H0 117 aa11.49□□□□□ -0.57
RPAIN-211ENST00000572174 hADV38S2A0JD32 116 aa11.49□□□□□ -0.57
RPAIN-211ENST00000572174 H3BUI4 141 aa11.49□□□□□ -0.57
RPAIN-211ENST00000572174 GABRPO00591 440 aa11.49□□□□□ -0.57
RPAIN-211ENST00000572174 ANGPTL7O43827 346 aa11.49□□□□□ -0.57
RPAIN-211ENST00000572174 ZNF737O75373 536 aa11.49□□□□□ -0.57
RPAIN-211ENST00000572174 FCN3O75636 299 aa11.49□□□□□ -0.57
RPAIN-211ENST00000572174 INMTO95050 263 aa11.49□□□□□ -0.57
RPAIN-211ENST00000572174 IGHV1-69P01742 117 aa11.49□□□□□ -0.57
RPAIN-211ENST00000572174 IGHV4-38-2P0DP08 117 aa11.49□□□□□ -0.57
RPAIN-211ENST00000572174 ZNF44P15621 663 aa11.49□□□□□ -0.57
RPAIN-211ENST00000572174 GABRR1P24046 479 aa11.49□□□□□ -0.57
RPAIN-211ENST00000572174 PTGFRP43088 359 aa11.49□□□□□ -0.57
RPAIN-211ENST00000572174 NPBWR2P48146 333 aa11.49□□□□□ -0.57
RPAIN-211ENST00000572174 KCNJ3P48549 501 aa11.49□□□□□ -0.57
RPAIN-211ENST00000572174 EDDM3BP56851 147 aa11.49□□□□□ -0.57
RPAIN-211ENST00000572174 GRK1Q15835 563 aa11.49□□□□□ -0.57
RPAIN-211ENST00000572174 ZNF367Q7RTV3 350 aa11.49□□□□□ -0.57
RPAIN-211ENST00000572174 BATF2Q8N1L9 274 aa11.49□□□□□ -0.57
RPAIN-211ENST00000572174 OR52N4Q8NGI2 321 aa11.49□□□□□ -0.57
RPAIN-211ENST00000572174 FOXRED1Q96CU9 486 aaPredicted RBP11.49□□□□□ -0.57
RPAIN-211ENST00000572174 TBX15Q96SF7 602 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms