RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 UGT2A1Q9Y4X1 527 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 AP4S1Q9Y587 144 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 CDH10Q9Y6N8 788 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 U3KQV3 271 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 ABCA12Q86UK0 2595 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 NAV2Q8IVL1 2488 aa3.15□□□□□ -1.91
NUP88-202ENST00000570937 ANKRD17O75179 2603 aaKnown RBP3.14□□□□□ -1.91
NUP88-202ENST00000570937 CELSR1Q9NYQ6 3014 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 IGLV4-3A0A075B6K6 122 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 A0A087WZ39 114 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 LOC390937A0A1W2PQ73 354 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 TCRBV3S1A0A5B6 114 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 OR6C6A6NF89 314 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 NKX6-3A6NJ46 265 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 SRRM5B3KS81 715 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 G3V2T6 193 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 H3BSA7 217 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 H7C1C5 153 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 M0R233 179 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 SGCEO43556 437 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 FKBP6O75344 327 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 APOC1P02654 83 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 ADRA2AP08913 450 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 HIST1H1CP16403 213 aaKnown RBP3.14□□□□□ -1.91
NUP88-202ENST00000570937 ZNF3P17036 446 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 ZNF32P17041 273 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 FASP25445 335 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 CALCRP30988 508 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 FMO3P31513 532 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 DUTP33316 252 aaKnown RBP3.14□□□□□ -1.91
NUP88-202ENST00000570937 GSSP48637 474 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 RGS6P49758 472 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 MTCP1P56278 107 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 ERVK-16P61578 105 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 LCN6P62502 163 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 PSG4Q00888 419 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 FAM106AQ4KMX7 169 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 CLEC12AQ5QGZ9 265 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 ZNF770Q6IQ21 691 aaPredicted RBP3.14□□□□□ -1.91
NUP88-202ENST00000570937 SLC27A4Q6P1M0 643 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 SHQ1Q6PI26 577 aaKnown RBP3.14□□□□□ -1.91
NUP88-202ENST00000570937 B3GLCTQ6Y288 498 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 ZNF620Q6ZNG0 422 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 KRT77Q7Z794 578 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 HIPK1Q86Z02 1210 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 OR6V1Q8N148 313 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 SVOPLQ8N434 492 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.14□□□□□ -1.91
NUP88-202ENST00000570937 TCEANCQ8N8B7 351 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 ICA1LQ8NDH6 482 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 WFDC11Q8NEX6 87 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 PROKR2Q8NFJ6 384 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 OR52E2Q8NGJ4 325 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 OR4C15Q8NGM1 316 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 OR4K13Q8NH42 304 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 AKR7LQ8NHP1 331 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 SYNPRQ8TBG9 265 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 GIMAP1Q8WWP7 306 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 SPTSSAQ969W0 71 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 MRPL24Q96A35 216 aaKnown RBP3.14□□□□□ -1.91
NUP88-202ENST00000570937 NABP1Q96AH0 204 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 RASD2Q96D21 266 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 SAMD8Q96LT4 415 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 RAB3IPQ96QF0 476 aaPredicted RBP3.14□□□□□ -1.91
NUP88-202ENST00000570937 PITX2Q99697 317 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 GPA33Q99795 319 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 ZNF416Q9BWM5 594 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 TSSK6Q9BXA6 273 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 REG4Q9BYZ8 158 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 RACGAP1Q9H0H5 632 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 HDHD2Q9H0R4 259 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 SP140LQ9H930 580 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 RPRD1BQ9NQG5 326 aaKnown RBP3.14□□□□□ -1.91
NUP88-202ENST00000570937 POLE4Q9NR33 117 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 ARMC1Q9NVT9 282 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 PLEK2Q9NYT0 353 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 PDP1Q9P0J1 537 aaPredicted RBP3.14□□□□□ -1.91
NUP88-202ENST00000570937 ATPIF1Q9UII2 106 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 BLOC1S6Q9UL45 172 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 TP53TG3Q9ULZ0 132 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 B9D1Q9UPM9 204 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 NOP16Q9Y3C1 178 aaKnown RBP3.14□□□□□ -1.91
NUP88-202ENST00000570937 ORC6Q9Y5N6 252 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 MYO9AB2RTY4 2548 aa3.14□□□□□ -1.91
NUP88-202ENST00000570937 FREM1Q5H8C1 2179 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 FAM25EA8MYX2 175 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 F8VVB4 439 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 F8VWA3 439 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 BHLHE40O14503 412 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 SOX14O95416 240 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 MMP7P09237 267 aaPredicted RBP3.13□□□□□ -1.91
NUP88-202ENST00000570937 CCL2P13500 99 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 FOLR2P14207 255 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 ZNF250P15622 560 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 CTLA4P16410 223 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 SELEP16581 610 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 USF1P22415 310 aaPredicted RBP3.13□□□□□ -1.91
NUP88-202ENST00000570937 HTR5AP47898 357 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 SLC25A1P53007 311 aa3.13□□□□□ -1.91
NUP88-202ENST00000570937 RAD23AP54725 363 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms