RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 POMPQ9Y244 141 aa6.91□□□□□ -1.3
CTDNEP1-203ENST00000570385 ZAR1LA6NP61 321 aa6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 SIRPB1O00241 398 aa6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 PSPNO60542 156 aa6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 DNAJC8O75937 253 aaPredicted RBP6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 PF4V1P10720 104 aa6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 PRKACAP17612 351 aa6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 BCL3P20749 454 aa6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 CCL1P22362 96 aa6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 POLR2IP36954 125 aaKnown RBP6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 FUT6P51993 359 aa6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 EFNB1P98172 346 aa6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 TCTEX1D4Q5JR98 221 aa6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 PRAMEF5Q5TYX0 476 aa6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 SLX4IPQ5VYV7 408 aa6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 C10orf99Q6UWK7 81 aa6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 CENPVQ7Z7K6 275 aaPredicted RBP6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 CATSPERDQ86XM0 798 aa6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 PRSS35Q8N3Z0 413 aa6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 DNAJC9Q8WXX5 260 aa6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 UTP4Q969X6 686 aaKnown RBP6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 RFT1Q96AA3 541 aa6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 NRBF2Q96F24 287 aa6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 BORCS8Q96FH0 119 aa6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 OCSTAMPQ9BR26 566 aa6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 PRRG3Q9BZD7 231 aa6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 TMEM133Q9H2Q1 129 aa6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 KRT84Q9NSB2 600 aa6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 SESN1Q9Y6P5 492 aa6.9□□□□□ -1.3
CTDNEP1-203ENST00000570385 LOC107986453A0A1B0GWG9 222 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 TCRBV4S1A1TA0A5B7 111 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 METTL15A6NJ78 407 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 DHRS7CA6NNS2 312 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 G3V2T6 193 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 GATBO75879 557 aaKnown RBP6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 RBP4P02753 201 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 LPLP06858 475 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 HTR1DP28221 377 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 PEX2P28328 305 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 ATP6V1E1P36543 226 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 GDNFP39905 211 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 KIR3DL2P43630 455 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 OR3A1P47881 315 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 DYNLT3P51808 116 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 MTCP1P56278 107 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 CD83Q01151 205 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 ZNF91Q05481 1191 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 MEF2CQ06413 473 aaPredicted RBP6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 SCN1BQ07699 218 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 DNAL1Q4LDG9 190 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 ABCA11PQ4W5N1 156 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 TP53I3Q53FA7 332 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 KHDC1LQ5JSQ8 128 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 UTF1Q5T230 341 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 MINOS1Q5TGZ0 78 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 C12orf73Q69YU5 71 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 Q6ZSR3 168 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 RNF144BQ7Z419 303 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 AMIGO2Q86SJ2 522 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 GID4Q8IVV7 300 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 FAM58AQ8N1B3 248 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 ABHD12Q8N2K0 398 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 OR4P4Q8NGL7 312 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 STMN2Q93045 179 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 ADAT3Q96EY9 351 aaPredicted RBP6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 SPACA5Q96QH8 159 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 MNTQ99583 582 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 CLEC7AQ9BXN2 247 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 CHST5Q9GZS9 411 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 GNG8Q9UK08 70 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 GSTK1Q9Y2Q3 226 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 ZNF281Q9Y2X9 895 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 LINC00312Q9Y6C7 94 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 MINOS1-NBL1R4GNA1 71 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 NBEAL2Q6ZNJ1 2754 aa6.89□□□□□ -1.31
CTDNEP1-203ENST00000570385 IGKV1-9A0A0C4DH69 117 aa6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 FAM90A22PA8MWA6 464 aa6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 K7EIL1 84 aa6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 ENTPD6O75354 484 aa6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 SERPINA3P01011 423 aa6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 IGHV3-7P01780 117 aa6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 PF4P02776 101 aa6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 OR2T7P0C7T2 308 aa6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 HOXB6P17509 224 aaKnown RBP6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 CDK2P24941 298 aa6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 GLIPR1P48060 266 aa6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 RBP2P50120 134 aa6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 ATP1B3P54709 279 aa6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 P2RX3P56373 397 aa6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 AESQ08117 197 aa6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 RBM39Q14498 530 aaKnown RBP6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 DEFB121Q5J5C9 76 aa6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 C9orf152Q5JTZ5 239 aa6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 KDM4DQ6B0I6 523 aa6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 OR5D18Q8NGL1 313 aa6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 CAPSLQ8WWF8 208 aa6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 MYDGFQ969H8 173 aa6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 FGGYQ96C11 551 aa6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 SLC7A6OSQ96CW6 309 aaPredicted RBP6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 CIB1Q99828 191 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms