RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 THEM6Q8WUY1 208 aa6.78□□□□□ -1.32
SMG1-216ENST00000569122 ZNRF4Q8WWF5 429 aa6.78□□□□□ -1.32
SMG1-216ENST00000569122 MCUR1Q96AQ8 359 aa6.78□□□□□ -1.32
SMG1-216ENST00000569122 TLCD1Q96CP7 247 aa6.78□□□□□ -1.32
SMG1-216ENST00000569122 HOPXQ9BPY8 73 aaPredicted RBP6.78□□□□□ -1.32
SMG1-216ENST00000569122 CHCHD6Q9BRQ6 235 aa6.78□□□□□ -1.32
SMG1-216ENST00000569122 NMNAT2Q9BZQ4 307 aa6.78□□□□□ -1.32
SMG1-216ENST00000569122 IL1RAPQ9NPH3 570 aa6.78□□□□□ -1.32
SMG1-216ENST00000569122 IL20Q9NYY1 176 aa6.78□□□□□ -1.32
SMG1-216ENST00000569122 LINC00527Q9UJ94 153 aa6.78□□□□□ -1.32
SMG1-216ENST00000569122 PIGLQ9Y2B2 252 aa6.78□□□□□ -1.32
SMG1-216ENST00000569122 HERC2O95714 4834 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 A0A0G2JND7 137 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 PQLC2LA1A4F0 135 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 MEX3AA1L020 520 aaKnown RBP6.77□□□□□ -1.33
SMG1-216ENST00000569122 LY6LH3BQJ8 138 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 OVOL1O14753 267 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 DHRS3O75911 302 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 IGHG4P01861 327 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 GYPBP06028 91 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 SPNP16150 400 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 VDAC1P21796 283 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 MTNR1BP49286 362 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 RAB7AP51149 207 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 P2RX3P56373 397 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 CDC42P60953 191 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 CRMP1Q14194 572 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 RBM39Q14498 530 aaKnown RBP6.77□□□□□ -1.33
SMG1-216ENST00000569122 DEGS2Q6QHC5 323 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 ASRGL1Q7L266 308 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 TCF23Q7RTU1 214 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 TGIF2LXQ8IUE1 241 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 PGAM4Q8N0Y7 254 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 OR2T33Q8NG76 320 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 OTOSQ8NHW6 89 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 CORO2AQ92828 525 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 TOMM40LQ969M1 308 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 RBMXL1Q96E39 390 aaKnown RBP6.77□□□□□ -1.33
SMG1-216ENST00000569122 C7orf34Q96L11 122 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 CEP19Q96LK0 163 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 UBE2E2Q96LR5 201 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 ISYNA1Q9NPH2 558 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 SLC7A11Q9UPY5 501 aa6.77□□□□□ -1.33
SMG1-216ENST00000569122 A0A087X0M5 115 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 TMEM269A0A1B0GVZ9 245 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 A0A1B0GX30 115 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 NCBP2LA6PVI3 153 aaKnown RBP6.76□□□□□ -1.33
SMG1-216ENST00000569122 MPZL2O60487 215 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 KRT36O76013 467 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 HAND1O96004 215 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 IGHV4-30-4P0DP06 118 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 RRM2P31350 389 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 ISL1P61371 349 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 RUNX1Q01196 453 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 GABPB1Q06547 395 aaPredicted RBP6.76□□□□□ -1.33
SMG1-216ENST00000569122 SF3A3Q12874 501 aaKnown RBP eCLIP6.76□□□□□ -1.33
SMG1-216ENST00000569122 MADCAM1Q13477 382 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 LINC01590Q5TEZ4 76 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 ACSM6Q6P461 480 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 C16orf89Q6UX73 402 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 RASSF6Q6ZTQ3 369 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 KRT77Q7Z794 578 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 OR56B4Q8NH76 319 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 OR9G1Q8NH87 305 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 HAVCR2Q8TDQ0 301 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 ZBTB9Q96C00 473 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 KCTD14Q9BQ13 255 aaPredicted RBP6.76□□□□□ -1.33
SMG1-216ENST00000569122 TSSK6Q9BXA6 273 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 PARD6BQ9BYG5 372 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 MROQ9BYG7 248 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 ABCG5Q9H222 651 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 EGLN3Q9H6Z9 239 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 TMBIM4Q9HC24 238 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 LIN7CQ9NUP9 197 aaKnown RBP6.76□□□□□ -1.33
SMG1-216ENST00000569122 CMTM6Q9NX76 183 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 VSIG4Q9Y279 399 aa6.76□□□□□ -1.33
SMG1-216ENST00000569122 TMEM82A0PJX8 343 aa6.75□□□□□ -1.33
SMG1-216ENST00000569122 TRIM64CA6NLI5 447 aa6.75□□□□□ -1.33
SMG1-216ENST00000569122 DHRS7CA6NNS2 312 aa6.75□□□□□ -1.33
SMG1-216ENST00000569122 ARPC1BO15143 372 aaKnown RBP6.75□□□□□ -1.33
SMG1-216ENST00000569122 PSPNO60542 156 aa6.75□□□□□ -1.33
SMG1-216ENST00000569122 ZNF254O75437 659 aa6.75□□□□□ -1.33
SMG1-216ENST00000569122 MMP23AO75900 390 aa6.75□□□□□ -1.33
SMG1-216ENST00000569122 DIRAS1O95057 198 aa6.75□□□□□ -1.33
SMG1-216ENST00000569122 CYB5AP00167 134 aa6.75□□□□□ -1.33
SMG1-216ENST00000569122 OR8U9P0C7N5 309 aa6.75□□□□□ -1.33
SMG1-216ENST00000569122 CLUP10909 449 aa6.75□□□□□ -1.33
SMG1-216ENST00000569122 PSMB8P28062 276 aa6.75□□□□□ -1.33
SMG1-216ENST00000569122 PTGFRP43088 359 aa6.75□□□□□ -1.33
SMG1-216ENST00000569122 KLF10Q13118 480 aa6.75□□□□□ -1.33
SMG1-216ENST00000569122 HNF4GQ14541 408 aa6.75□□□□□ -1.33
SMG1-216ENST00000569122 SRSF7Q16629 238 aaKnown RBP eCLIP6.75□□□□□ -1.33
SMG1-216ENST00000569122 ZNF829Q3KNS6 432 aaPredicted RBP6.75□□□□□ -1.33
SMG1-216ENST00000569122 PRAMEF5Q5TYX0 476 aa6.75□□□□□ -1.33
SMG1-216ENST00000569122 TMEM42Q69YG0 159 aa6.75□□□□□ -1.33
SMG1-216ENST00000569122 TRPM8Q7Z2W7 1104 aa6.75□□□□□ -1.33
SMG1-216ENST00000569122 RNF148Q8N7C7 305 aa6.75□□□□□ -1.33
SMG1-216ENST00000569122 TPRX1Q8N7U7 411 aa6.75□□□□□ -1.33
SMG1-216ENST00000569122 OR8H1Q8NGG4 311 aa6.75□□□□□ -1.33
SMG1-216ENST00000569122 OR51E1Q8TCB6 317 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms