RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 RNF170Q96K19 258 aa2.5□□□□□ -2.01
HMGB1P6-201ENST00000569046 C9orf85Q96MD7 179 aa2.5□□□□□ -2.01
HMGB1P6-201ENST00000569046 BIRC8Q96P09 236 aa2.5□□□□□ -2.01
HMGB1P6-201ENST00000569046 ECSITQ9BQ95 431 aa2.5□□□□□ -2.01
HMGB1P6-201ENST00000569046 MED18Q9BUE0 208 aa2.5□□□□□ -2.01
HMGB1P6-201ENST00000569046 UGT2B28Q9BY64 529 aa2.5□□□□□ -2.01
HMGB1P6-201ENST00000569046 CHIAQ9BZP6 476 aa2.5□□□□□ -2.01
HMGB1P6-201ENST00000569046 ACTR6Q9GZN1 396 aa2.5□□□□□ -2.01
HMGB1P6-201ENST00000569046 OPN3Q9H1Y3 402 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P6-201ENST00000569046 RNF167Q9H6Y7 350 aa2.5□□□□□ -2.01
HMGB1P6-201ENST00000569046 EML4Q9HC35 981 aaKnown RBP2.5□□□□□ -2.01
HMGB1P6-201ENST00000569046 FBXO6Q9NRD1 293 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P6-201ENST00000569046 PRTFDC1Q9NRG1 225 aa2.5□□□□□ -2.01
HMGB1P6-201ENST00000569046 ZNF629Q9UEG4 869 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P6-201ENST00000569046 MEGF8Q7Z7M0 2845 aa2.5□□□□□ -2.01
HMGB1P6-201ENST00000569046 TET2Q6N021 2002 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 TRAV6A0A075B6T7 132 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 IGKV3D-11A0A0A0MRZ8 115 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 A0A1W2PRD5 423 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 FAM231BA6NCW3 169 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 C17orf51A8MQB3 221 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 ZNF487B1APH4 448 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 E5RI56 91 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 E9PLD3 99 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 APOC4-APOC2K7ER74 178 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 PSMD12O00232 456 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 DCTN6O00399 190 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 SCN2BO60939 215 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 CBR3O75828 277 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 SC5DO75845 299 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 LY6HO94772 140 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 KLHL2O95198 593 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 RENP00797 406 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 HLA-HP01893 362 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 APOC2P02655 101 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 C1QAP02745 245 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 CATP04040 527 aaKnown RBP2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 SERPINA5P05154 406 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 SLC35G6P0C7Q6 338 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 CTRB1P17538 263 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 ATP6V1B2P21281 511 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 LOXP28300 417 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 CALCRP30988 508 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 SPRP35270 261 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 OPRM1P35372 400 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 ELK3P41970 407 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 YAP1P46937 504 aaKnown RBP2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 TTPAP49638 278 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 GPM6AP51674 278 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 HNRNPA3P51991 378 aaKnown RBP2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 BLVRAP53004 296 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 FBXW4P57775 412 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 GPX6P59796 221 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 MRPS11P82912 194 aaKnown RBP2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 GNMTQ14749 295 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 TRMT5Q32P41 509 aaKnown RBP2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 ZNF791Q3KP31 576 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 FBXL19-AS1Q494R0 122 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 PAGE2BQ5JRK9 111 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 RNLSQ5VYX0 342 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 LEMD1Q68G75 181 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 CTRB2Q6GPI1 263 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 OR5M10Q6IEU7 315 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 ANKRD26P1Q6NSI1 321 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 SBSNQ6UWP8 590 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 CYHR1Q6ZMK1 362 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 FRA10AC1Q70Z53 315 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 CMC1Q7Z7K0 106 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 ZNF584Q8IVC4 421 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 APRG1Q8IVJ8 170 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 C9orf40Q8IXQ3 194 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 RNF175Q8N4F7 328 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 MREGQ8N565 214 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 OR5M1Q8NGP8 315 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 ZNF721Q8TF20 911 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 PYROXD1Q8WU10 500 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 EEF1AKMT1Q8WVE0 214 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 BAALCQ8WXS3 180 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 CCDC124Q96CT7 223 aaKnown RBP2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 DUS3LQ96G46 650 aaKnown RBP2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 SNF8Q96H20 258 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 ITCHQ96J02 903 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 NOL4LQ96MY1 436 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 OR4K3Q96R72 315 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 OR8B4Q96RC9 309 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 GPR21Q99679 349 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 EBNA1BP2Q99848 306 aaKnown RBP2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 KLHDC3Q9BQ90 382 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 DOHHQ9BU89 302 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 NMUR2Q9GZQ4 415 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 CLEC5AQ9NY25 188 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 ZNF107Q9UII5 783 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 RPL36Q9Y3U8 105 aaKnown RBP2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 AUP1Q9Y679 476 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 SLC22A7Q9Y694 548 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 ARID1AO14497 2285 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 TGP01266 2768 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 STAB1Q9NY15 2570 aa2.49□□□□□ -2.01
HMGB1P6-201ENST00000569046 A0A1B0GWB2 263 aa2.48□□□□□ -2.01
HMGB1P6-201ENST00000569046 CENPXA8MT69 81 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms