RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 MTCH1Q9NZJ7 389 aa12.56□□□□□ -0.4
HERPUD1-215ENST00000568676 RYR3Q15413 4870 aa12.56□□□□□ -0.4
HERPUD1-215ENST00000568676 FAM230AA0A1W2PPH8 454 aa12.55□□□□□ -0.4
HERPUD1-215ENST00000568676 TMEM82A0PJX8 343 aa12.55□□□□□ -0.4
HERPUD1-215ENST00000568676 FUOMA2VDF0 154 aa12.55□□□□□ -0.4
HERPUD1-215ENST00000568676 OOSP1A8MZH6 123 aa12.55□□□□□ -0.4
HERPUD1-215ENST00000568676 HAND1O96004 215 aa12.55□□□□□ -0.4
HERPUD1-215ENST00000568676 MRPL3P09001 348 aaKnown RBP12.55□□□□□ -0.4
HERPUD1-215ENST00000568676 JUNBP17275 347 aaPredicted RBP12.55□□□□□ -0.4
HERPUD1-215ENST00000568676 CDC42P60953 191 aa12.55□□□□□ -0.4
HERPUD1-215ENST00000568676 CBX1P83916 185 aa12.55□□□□□ -0.4
HERPUD1-215ENST00000568676 CCDC144NLQ6NUI1 221 aa12.55□□□□□ -0.4
HERPUD1-215ENST00000568676 ABHD12Q8N2K0 398 aa12.55□□□□□ -0.4
HERPUD1-215ENST00000568676 C10orf35Q96D05 121 aa12.55□□□□□ -0.4
HERPUD1-215ENST00000568676 ASB9Q96DX5 294 aa12.55□□□□□ -0.4
HERPUD1-215ENST00000568676 COPS3Q9UNS2 423 aa12.55□□□□□ -0.4
HERPUD1-215ENST00000568676 ARL2BPQ9Y2Y0 163 aa12.55□□□□□ -0.4
HERPUD1-215ENST00000568676 DSCAML1Q8TD84 2053 aa12.55□□□□□ -0.4
HERPUD1-215ENST00000568676 MEX3AA1L020 520 aaKnown RBP12.54□□□□□ -0.4
HERPUD1-215ENST00000568676 CCDC182A6NF36 153 aa12.54□□□□□ -0.4
HERPUD1-215ENST00000568676 PRR32B1ATL7 298 aa12.54□□□□□ -0.4
HERPUD1-215ENST00000568676 CYB5AP00167 134 aa12.54□□□□□ -0.4
HERPUD1-215ENST00000568676 SERPINA3P01011 423 aa12.54□□□□□ -0.4
HERPUD1-215ENST00000568676 GABRR1P24046 479 aa12.54□□□□□ -0.4
HERPUD1-215ENST00000568676 HOXD3P31249 432 aaPredicted RBP12.54□□□□□ -0.4
HERPUD1-215ENST00000568676 MNDAP41218 407 aa12.54□□□□□ -0.4
HERPUD1-215ENST00000568676 GP2P55259 537 aaKnown RBP12.54□□□□□ -0.4
HERPUD1-215ENST00000568676 P2RX3P56373 397 aa12.54□□□□□ -0.4
HERPUD1-215ENST00000568676 CXCR4P61073 352 aa12.54□□□□□ -0.4
HERPUD1-215ENST00000568676 ZNF91Q05481 1191 aa12.54□□□□□ -0.4
HERPUD1-215ENST00000568676 SPIN3Q5JUX0 258 aa12.54□□□□□ -0.4
HERPUD1-215ENST00000568676 HEPN1Q6WQI6 88 aa12.54□□□□□ -0.4
HERPUD1-215ENST00000568676 TRAPPC6BQ86SZ2 158 aa12.54□□□□□ -0.4
HERPUD1-215ENST00000568676 MRPL41Q8IXM3 137 aaKnown RBP12.54□□□□□ -0.4
HERPUD1-215ENST00000568676 TRMT10AQ8TBZ6 339 aaKnown RBP12.54□□□□□ -0.4
HERPUD1-215ENST00000568676 EMG1Q92979 244 aaKnown RBP12.54□□□□□ -0.4
HERPUD1-215ENST00000568676 BORCS8Q96FH0 119 aa12.54□□□□□ -0.4
HERPUD1-215ENST00000568676 CADM1Q9BY67 442 aaKnown RBP12.54□□□□□ -0.4
HERPUD1-215ENST00000568676 CHST5Q9GZS9 411 aa12.54□□□□□ -0.4
HERPUD1-215ENST00000568676 ZFP57Q9NU63 452 aa12.54□□□□□ -0.4
HERPUD1-215ENST00000568676 TAS2R3Q9NYW6 316 aa12.54□□□□□ -0.4
HERPUD1-215ENST00000568676 TVP23BQ9NYZ1 205 aa12.54□□□□□ -0.4
HERPUD1-215ENST00000568676 HHLA2Q9UM44 414 aa12.54□□□□□ -0.4
HERPUD1-215ENST00000568676 TRGV10A0A0A0MS01 117 aa12.53□□□□□ -0.4
HERPUD1-215ENST00000568676 PSMB11A5LHX3 300 aa12.53□□□□□ -0.4
HERPUD1-215ENST00000568676 B2RBV5 119 aa12.53□□□□□ -0.4
HERPUD1-215ENST00000568676 F8VVB4 439 aa12.53□□□□□ -0.4
HERPUD1-215ENST00000568676 F8VWA3 439 aa12.53□□□□□ -0.4
HERPUD1-215ENST00000568676 RAMP3O60896 148 aa12.53□□□□□ -0.4
HERPUD1-215ENST00000568676 IGLV1-47P01700 117 aa12.53□□□□□ -0.4
HERPUD1-215ENST00000568676 CD34P28906 385 aa12.53□□□□□ -0.4
HERPUD1-215ENST00000568676 THBS3P49746 956 aa12.53□□□□□ -0.4
HERPUD1-215ENST00000568676 GYS2P54840 703 aa12.53□□□□□ -0.4
HERPUD1-215ENST00000568676 MS4A2Q01362 244 aa12.53□□□□□ -0.4
HERPUD1-215ENST00000568676 ZNF146Q15072 292 aa12.53□□□□□ -0.4
HERPUD1-215ENST00000568676 SLC25A26Q70HW3 274 aa12.53□□□□□ -0.4
HERPUD1-215ENST00000568676 SLAMF9Q96A28 289 aa12.53□□□□□ -0.4
HERPUD1-215ENST00000568676 APOL4Q9BPW4 351 aa12.53□□□□□ -0.4
HERPUD1-215ENST00000568676 PCDHB16Q9NRJ7 776 aa12.53□□□□□ -0.4
HERPUD1-215ENST00000568676 CLN6Q9NWW5 311 aa12.53□□□□□ -0.4
HERPUD1-215ENST00000568676 H2AFY2Q9P0M6 372 aaPredicted RBP12.53□□□□□ -0.4
HERPUD1-215ENST00000568676 TRBV2A0A0J9YWF9 115 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 A6NIN4 97 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 AQP12BA6NM10 295 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 ZNF670-ZNF695F2Z2N8 137 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 PSPNO60542 156 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 IGHA1P01876 353 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 AMY1AP04745 511 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 AMY2AP04746 511 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 FAM106CPP0CH98 169 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 MYCNOSP40205 109 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 PRRX1P54821 245 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 UBE2V2Q15819 145 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 TMEM236Q5W0B7 351 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 MEPCEQ7L2J0 689 aaKnown RBP12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 TMEM179BQ7Z7N9 219 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 AQP12AQ8IXF9 295 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 SLC35F2Q8IXU6 374 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 ADGRG5Q8IZF4 528 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 COMMD1Q8N668 190 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 TPRX1Q8N7U7 411 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 DNAAF1Q8NEP3 725 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 OR52N4Q8NGI2 321 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 CHPT1Q8WUD6 406 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 PP6455Q8WZ26 134 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 CORO2AQ92828 525 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 ZNF649Q9BS31 505 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 TTTY10Q9BZA0 68 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 CHST6Q9GZX3 395 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 MOB4Q9Y3A3 225 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 HSPE1-MOB4S4R3N1 261 aa12.52□□□□□ -0.41
HERPUD1-215ENST00000568676 IGKV1-27A0A075B6S5 117 aa12.51□□□□□ -0.41
HERPUD1-215ENST00000568676 BUB1B-PAK6H3BSN5 160 aa12.51□□□□□ -0.41
HERPUD1-215ENST00000568676 TOR1AO14656 332 aa12.51□□□□□ -0.41
HERPUD1-215ENST00000568676 SYT7O43581 403 aa12.51□□□□□ -0.41
HERPUD1-215ENST00000568676 ZFPL1O95159 310 aa12.51□□□□□ -0.41
HERPUD1-215ENST00000568676 KRT8P05787 483 aa12.51□□□□□ -0.41
HERPUD1-215ENST00000568676 CDK2P24941 298 aa12.51□□□□□ -0.41
HERPUD1-215ENST00000568676 CD24P25063 80 aa12.51□□□□□ -0.41
HERPUD1-215ENST00000568676 LMO1P25800 156 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms