RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 GDPD3Q7L5L3 318 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 ENTHD1Q8IYW4 607 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 RDH10Q8IZV5 341 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 OR8H2Q8N162 312 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 BATF2Q8N1L9 274 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 PQLC1Q8N2U9 271 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 PNKDQ8N490 385 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 C11orf42Q8N5U0 333 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 ASCC1Q8N9N2 400 aaKnown RBP3.9□□□□□ -1.79
CLK3-219ENST00000567805 OR4M1Q8NGD0 313 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 OR13C3Q8NGS6 347 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 RHOXF1Q8NHV9 184 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 LINC01006Q8NI28 216 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 HAVCR2Q8TDQ0 301 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 EMG1Q92979 244 aaKnown RBP3.9□□□□□ -1.79
CLK3-219ENST00000567805 SLAMF9Q96A28 289 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 FGGYQ96C11 551 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 LGALS12Q96DT0 336 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 ADAT3Q96EY9 351 aaPredicted RBP3.9□□□□□ -1.79
CLK3-219ENST00000567805 PELI1Q96FA3 418 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 C4orf36Q96KX1 117 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 SNX22Q96L94 193 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 OPALINQ96PE5 141 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 SSX3Q99909 188 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 CITED1Q99966 193 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 ALG8Q9BVK2 526 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 MEGF9Q9H1U4 602 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 C16orf95Q9H693 158 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 HEXA-AS1Q9H8Q6 139 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 LIN7BQ9HAP6 207 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 SEBOXQ9HB31 216 aaPredicted RBP3.9□□□□□ -1.79
CLK3-219ENST00000567805 NEK6Q9HC98 313 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 S100A14Q9HCY8 104 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 RAB18Q9NP72 206 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 INPP5EQ9NRR6 644 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 GLS2Q9UI32 602 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 HHLA2Q9UM44 414 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 RNF114Q9Y508 228 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 hADV38S2A0JD32 116 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 TMEM82A0PJX8 343 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 TMEM212A6NML5 194 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 OR4C45A6NMZ5 311 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 H3BUX3 64 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 M0QZ24 198 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 TIMM23O14925 209 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 TSPAN9O75954 239 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 ALX3O95076 343 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 FADS2O95864 444 aaKnown RBP3.89□□□□□ -1.79
CLK3-219ENST00000567805 HAND1O96004 215 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 MT-ND2P03891 347 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 CCDC159P0C7I6 412 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 OCM2P0CE71 109 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 OCMP0CE72 109 aaPredicted RBP3.89□□□□□ -1.79
CLK3-219ENST00000567805 ZNF728P0DKX0 622 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 PIPP12273 146 aaPredicted RBP3.89□□□□□ -1.79
CLK3-219ENST00000567805 CCL3L1P16619 93 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 BCL3P20749 454 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 GABRR1P24046 479 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 PEX2P28328 305 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 NPBWR2P48146 333 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 POU3F4P49335 361 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 BMXP51813 675 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 DLX6P56179 175 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 EDDM3BP56851 147 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 PROK1P58294 105 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 RAB40BQ12829 278 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 PDZK1IP1Q13113 114 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 ZNF273Q14593 569 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 ZNF146Q15072 292 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 GRK1Q15835 563 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 ZSCAN26Q16670 478 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 KLHL22Q53GT1 634 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 LPCAT4Q643R3 524 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 LHFPL3Q86UP9 236 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 SERPINA12Q8IW75 414 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 SAXO1Q8IYX7 474 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 FAM58AQ8N1B3 248 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 SYS1Q8N2H4 156 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 ZNF676Q8N7Q3 588 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 DTX3Q8N9I9 347 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 OR51A4Q8NGJ6 313 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 OR13D1Q8NGV5 346 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 PPP1R35Q8TAP8 253 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 C17orf50Q8WW18 174 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 FOXRED1Q96CU9 486 aaPredicted RBP3.89□□□□□ -1.79
CLK3-219ENST00000567805 CPNE2Q96FN4 548 aaPredicted RBP3.89□□□□□ -1.79
CLK3-219ENST00000567805 AJUBAQ96IF1 538 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 ZNF714Q96N38 554 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 RDH12Q96NR8 316 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 SLC29A1Q99808 456 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 COMMD4Q9H0A8 199 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 PPA2Q9H2U2 334 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 ZCCHC4Q9H5U6 513 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 RHOFQ9HBH0 211 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 MRPS18AQ9NVS2 196 aaKnown RBP3.89□□□□□ -1.79
CLK3-219ENST00000567805 RBFOX1Q9NWB1 397 aaKnown RBP3.89□□□□□ -1.79
CLK3-219ENST00000567805 FAM118AQ9NWS6 357 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 ERVK13-1Q9NX77 482 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 AASSQ9UDR5 926 aa3.89□□□□□ -1.79
CLK3-219ENST00000567805 TMA7Q9Y2S6 64 aaKnown RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms