RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 ADARB1P78563 741 aaKnown RBP5.65□□□□□ -1.5
SF3B3-209ENST00000567635 RELBQ01201 579 aa5.65□□□□□ -1.5
SF3B3-209ENST00000567635 COL10A1Q03692 680 aa5.65□□□□□ -1.5
SF3B3-209ENST00000567635 CNN3Q15417 329 aaKnown RBP5.65□□□□□ -1.5
SF3B3-209ENST00000567635 KLHL22Q53GT1 634 aa5.65□□□□□ -1.5
SF3B3-209ENST00000567635 FOXB2Q5VYV0 432 aa5.65□□□□□ -1.5
SF3B3-209ENST00000567635 OLFML2AQ68BL7 652 aa5.65□□□□□ -1.5
SF3B3-209ENST00000567635 THOC7Q6I9Y2 204 aaKnown RBP5.65□□□□□ -1.5
SF3B3-209ENST00000567635 HCP5Q6MZN7 132 aa5.65□□□□□ -1.5
SF3B3-209ENST00000567635 GDPGP1Q6ZNW5 385 aa5.65□□□□□ -1.5
SF3B3-209ENST00000567635 IQCF2Q8IXL9 164 aa5.65□□□□□ -1.5
SF3B3-209ENST00000567635 Q8IYB0 196 aa5.65□□□□□ -1.5
SF3B3-209ENST00000567635 ENTHD1Q8IYW4 607 aa5.65□□□□□ -1.5
SF3B3-209ENST00000567635 PNKDQ8N490 385 aa5.65□□□□□ -1.5
SF3B3-209ENST00000567635 OR4M1Q8NGD0 313 aa5.65□□□□□ -1.5
SF3B3-209ENST00000567635 ADAT3Q96EY9 351 aaPredicted RBP5.65□□□□□ -1.5
SF3B3-209ENST00000567635 PELI1Q96FA3 418 aa5.65□□□□□ -1.5
SF3B3-209ENST00000567635 C4orf36Q96KX1 117 aa5.65□□□□□ -1.5
SF3B3-209ENST00000567635 SNX22Q96L94 193 aa5.65□□□□□ -1.5
SF3B3-209ENST00000567635 ZNF696Q9H7X3 374 aa5.65□□□□□ -1.5
SF3B3-209ENST00000567635 ZNRD1Q9P1U0 126 aa5.65□□□□□ -1.5
SF3B3-209ENST00000567635 HHLA2Q9UM44 414 aa5.65□□□□□ -1.5
SF3B3-209ENST00000567635 RPL36Q9Y3U8 105 aaKnown RBP5.65□□□□□ -1.5
SF3B3-209ENST00000567635 TET2Q6N021 2002 aaPredicted RBP5.64□□□□□ -1.51
SF3B3-209ENST00000567635 IGKV1-9A0A0C4DH69 117 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 CLPSL1A2RUU4 121 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 OR4C45A6NMZ5 311 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 IGHA1P01876 353 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 OCM2P0CE71 109 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 OCMP0CE72 109 aaPredicted RBP5.64□□□□□ -1.51
SF3B3-209ENST00000567635 DBTP11182 482 aaKnown RBP5.64□□□□□ -1.51
SF3B3-209ENST00000567635 S100A1P23297 94 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 MYF6P23409 242 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 CAPGP40121 348 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 NPBWR2P48146 333 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 GBX2P52951 348 aaPredicted RBP5.64□□□□□ -1.51
SF3B3-209ENST00000567635 LGALS4P56470 323 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 ERVFRD-1P60508 538 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 ZNF91Q05481 1191 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 RAB40BQ12829 278 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 MRPL28Q13084 256 aaKnown RBP5.64□□□□□ -1.51
SF3B3-209ENST00000567635 PDZK1IP1Q13113 114 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 DCTN2Q13561 401 aaKnown RBP5.64□□□□□ -1.51
SF3B3-209ENST00000567635 ALKBH1Q13686 389 aaKnown RBP5.64□□□□□ -1.51
SF3B3-209ENST00000567635 TAF9Q16594 264 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 PRR31Q5SQ13 230 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 TTC23Q5W5X9 447 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 LIAT1Q6ZQX7 453 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 C17orf107Q6ZR85 190 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 LHFPL2Q6ZUX7 228 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 GDPD3Q7L5L3 318 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 FAM58AQ8N1B3 248 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 SYS1Q8N2H4 156 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 C11orf42Q8N5U0 333 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 ZNF676Q8N7Q3 588 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 ASCC1Q8N9N2 400 aaKnown RBP5.64□□□□□ -1.51
SF3B3-209ENST00000567635 ZSCAN4Q8NAM6 433 aaPredicted RBP5.64□□□□□ -1.51
SF3B3-209ENST00000567635 BEND2Q8NDZ0 799 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 ZNF555Q8NEP9 628 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 OR5D14Q8NGL3 314 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 OR13C3Q8NGS6 347 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 OR5R1Q8NH85 324 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 AJUBAQ96IF1 538 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 ALG8Q9BVK2 526 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 ANKRD60Q9BZ19 345 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 MEGF9Q9H1U4 602 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 ISG20L2Q9H9L3 353 aaKnown RBP5.64□□□□□ -1.51
SF3B3-209ENST00000567635 NEK6Q9HC98 313 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 AMBNQ9NP70 447 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 INPP5EQ9NRR6 644 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 MRPS18AQ9NVS2 196 aaKnown RBP5.64□□□□□ -1.51
SF3B3-209ENST00000567635 ERVK13-1Q9NX77 482 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 SMPD3Q9NY59 655 aaPredicted RBP5.64□□□□□ -1.51
SF3B3-209ENST00000567635 GLS2Q9UI32 602 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 MYRFQ9Y2G1 1151 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 RNF114Q9Y508 228 aa5.64□□□□□ -1.51
SF3B3-209ENST00000567635 TMEM82A0PJX8 343 aa5.63□□□□□ -1.51
SF3B3-209ENST00000567635 TMEM212A6NML5 194 aa5.63□□□□□ -1.51
SF3B3-209ENST00000567635 C17orf98A8MV24 154 aa5.63□□□□□ -1.51
SF3B3-209ENST00000567635 E9PI62 339 aa5.63□□□□□ -1.51
SF3B3-209ENST00000567635 SH2D1BO14796 132 aa5.63□□□□□ -1.51
SF3B3-209ENST00000567635 ZNF737O75373 536 aa5.63□□□□□ -1.51
SF3B3-209ENST00000567635 ALX3O95076 343 aa5.63□□□□□ -1.51
SF3B3-209ENST00000567635 HAND1O96004 215 aa5.63□□□□□ -1.51
SF3B3-209ENST00000567635 RBP4P02753 201 aa5.63□□□□□ -1.51
SF3B3-209ENST00000567635 MT-ND2P03891 347 aa5.63□□□□□ -1.51
SF3B3-209ENST00000567635 ZNF728P0DKX0 622 aa5.63□□□□□ -1.51
SF3B3-209ENST00000567635 PIPP12273 146 aaPredicted RBP5.63□□□□□ -1.51
SF3B3-209ENST00000567635 CCL3L1P16619 93 aa5.63□□□□□ -1.51
SF3B3-209ENST00000567635 PRKACAP17612 351 aa5.63□□□□□ -1.51
SF3B3-209ENST00000567635 BCL3P20749 454 aa5.63□□□□□ -1.51
SF3B3-209ENST00000567635 GABRR1P24046 479 aa5.63□□□□□ -1.51
SF3B3-209ENST00000567635 AZGP1P25311 298 aaKnown RBP5.63□□□□□ -1.51
SF3B3-209ENST00000567635 DUSP1P28562 367 aa5.63□□□□□ -1.51
SF3B3-209ENST00000567635 TGFBR2P37173 567 aa5.63□□□□□ -1.51
SF3B3-209ENST00000567635 POU3F4P49335 361 aa5.63□□□□□ -1.51
SF3B3-209ENST00000567635 DLX6P56179 175 aa5.63□□□□□ -1.51
SF3B3-209ENST00000567635 EDDM3BP56851 147 aa5.63□□□□□ -1.51
SF3B3-209ENST00000567635 ARPC4P59998 168 aa5.63□□□□□ -1.51
SF3B3-209ENST00000567635 MEF2CQ06413 473 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms