RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 IGKV1-12A0A0C4DH73 117 aa10.12□□□□□ -0.79
SF3B3-208ENST00000567250 TRIM64CA6NLI5 447 aa10.12□□□□□ -0.79
SF3B3-208ENST00000567250 KIAA1324LA8MWY0 1029 aaPredicted RBP10.12□□□□□ -0.79
SF3B3-208ENST00000567250 PDCD5O14737 125 aa10.12□□□□□ -0.79
SF3B3-208ENST00000567250 HAND1O96004 215 aa10.12□□□□□ -0.79
SF3B3-208ENST00000567250 IGKV1D-12P01611 117 aa10.12□□□□□ -0.79
SF3B3-208ENST00000567250 UBBP0CG47 229 aa10.12□□□□□ -0.79
SF3B3-208ENST00000567250 PRDX2P32119 198 aa10.12□□□□□ -0.79
SF3B3-208ENST00000567250 NPBWR2P48146 333 aa10.12□□□□□ -0.79
SF3B3-208ENST00000567250 PSMD7P51665 324 aa10.12□□□□□ -0.79
SF3B3-208ENST00000567250 CAPZA1P52907 286 aa10.12□□□□□ -0.79
SF3B3-208ENST00000567250 GP2P55259 537 aaKnown RBP10.12□□□□□ -0.79
SF3B3-208ENST00000567250 IL13RA2Q14627 380 aa10.12□□□□□ -0.79
SF3B3-208ENST00000567250 ZNF146Q15072 292 aa10.12□□□□□ -0.79
SF3B3-208ENST00000567250 DGUOKQ16854 277 aa10.12□□□□□ -0.79
SF3B3-208ENST00000567250 ELP2Q6IA86 826 aa10.12□□□□□ -0.79
SF3B3-208ENST00000567250 ZNF841Q6ZN19 808 aa10.12□□□□□ -0.79
SF3B3-208ENST00000567250 LINC00596Q86U02 117 aa10.12□□□□□ -0.79
SF3B3-208ENST00000567250 ASCC1Q8N9N2 400 aaKnown RBP10.12□□□□□ -0.79
SF3B3-208ENST00000567250 CHST4Q8NCG5 386 aa10.12□□□□□ -0.79
SF3B3-208ENST00000567250 TBC1D15Q8TC07 691 aa10.12□□□□□ -0.79
SF3B3-208ENST00000567250 MRI1Q9BV20 369 aa10.12□□□□□ -0.79
SF3B3-208ENST00000567250 CST11Q9H112 138 aa10.12□□□□□ -0.79
SF3B3-208ENST00000567250 CNTD2Q9H8S5 307 aa10.12□□□□□ -0.79
SF3B3-208ENST00000567250 SEBOXQ9HB31 216 aaPredicted RBP10.12□□□□□ -0.79
SF3B3-208ENST00000567250 GHRLQ9UBU3 117 aa10.12□□□□□ -0.79
SF3B3-208ENST00000567250 LPAR3Q9UBY5 353 aa10.12□□□□□ -0.79
SF3B3-208ENST00000567250 ING4Q9UNL4 249 aa10.12□□□□□ -0.79
SF3B3-208ENST00000567250 LOC105371242A0A075B767 164 aa10.11□□□□□ -0.79
SF3B3-208ENST00000567250 TRBV23-1A0A0A0MS06 115 aa10.11□□□□□ -0.79
SF3B3-208ENST00000567250 TRAV1-2A0A0B4J238 106 aa10.11□□□□□ -0.79
SF3B3-208ENST00000567250 F8VVB4 439 aa10.11□□□□□ -0.79
SF3B3-208ENST00000567250 F8VWA3 439 aa10.11□□□□□ -0.79
SF3B3-208ENST00000567250 SH2D1BO14796 132 aa10.11□□□□□ -0.79
SF3B3-208ENST00000567250 HTR3BO95264 441 aa10.11□□□□□ -0.79
SF3B3-208ENST00000567250 LIPFP07098 398 aa10.11□□□□□ -0.79
SF3B3-208ENST00000567250 SFTPBP07988 381 aa10.11□□□□□ -0.79
SF3B3-208ENST00000567250 GTF2F2P13984 249 aa10.11□□□□□ -0.79
SF3B3-208ENST00000567250 CD36P16671 472 aa10.11□□□□□ -0.79
SF3B3-208ENST00000567250 NDUFB7P17568 137 aa10.11□□□□□ -0.79
SF3B3-208ENST00000567250 SERPINA2P20848 420 aa10.11□□□□□ -0.79
SF3B3-208ENST00000567250 FGF9P31371 208 aaPredicted RBP10.11□□□□□ -0.79
SF3B3-208ENST00000567250 SNU13P55769 128 aaKnown RBP10.11□□□□□ -0.79
SF3B3-208ENST00000567250 ASCL4Q6XD76 172 aa10.11□□□□□ -0.79
SF3B3-208ENST00000567250 RNF144BQ7Z419 303 aa10.11□□□□□ -0.79
SF3B3-208ENST00000567250 LRRTM1Q86UE6 522 aa10.11□□□□□ -0.79
SF3B3-208ENST00000567250 OSR2Q8N2R0 312 aa10.11□□□□□ -0.79
SF3B3-208ENST00000567250 CD177Q8N6Q3 437 aa10.11□□□□□ -0.79
SF3B3-208ENST00000567250 OR6M1Q8NGM8 313 aa10.11□□□□□ -0.79
SF3B3-208ENST00000567250 RAB40AQ8WXH6 277 aa10.11□□□□□ -0.79
SF3B3-208ENST00000567250 H1FXQ92522 213 aaKnown RBP10.11□□□□□ -0.79
SF3B3-208ENST00000567250 MRPS24Q96EL2 167 aaKnown RBP10.11□□□□□ -0.79
SF3B3-208ENST00000567250 DMRTB1Q96MA1 342 aa10.11□□□□□ -0.79
SF3B3-208ENST00000567250 MRPS26Q9BYN8 205 aaKnown RBP10.11□□□□□ -0.79
SF3B3-208ENST00000567250 PLGRKTQ9HBL7 147 aa10.11□□□□□ -0.79
SF3B3-208ENST00000567250 CDC42EP3Q9UKI2 254 aa10.11□□□□□ -0.79
SF3B3-208ENST00000567250 INSIG2Q9Y5U4 225 aa10.11□□□□□ -0.79
SF3B3-208ENST00000567250 TEP1Q99973 2627 aaKnown RBP10.11□□□□□ -0.79
SF3B3-208ENST00000567250 A0A1W2PPH5 198 aa10.1□□□□□ -0.79
SF3B3-208ENST00000567250 CDRT1O95170 752 aa10.1□□□□□ -0.79
SF3B3-208ENST00000567250 ZNF44P15621 663 aa10.1□□□□□ -0.79
SF3B3-208ENST00000567250 JUNBP17275 347 aaPredicted RBP10.1□□□□□ -0.79
SF3B3-208ENST00000567250 ADRA2CP18825 462 aa10.1□□□□□ -0.79
SF3B3-208ENST00000567250 AMY2BP19961 511 aa10.1□□□□□ -0.79
SF3B3-208ENST00000567250 ZFP36P26651 326 aaKnown RBP10.1□□□□□ -0.79
SF3B3-208ENST00000567250 HTR2CP28335 458 aa10.1□□□□□ -0.79
SF3B3-208ENST00000567250 CEBPDP49716 269 aaPredicted RBP10.1□□□□□ -0.79
SF3B3-208ENST00000567250 COL10A1Q03692 680 aa10.1□□□□□ -0.79
SF3B3-208ENST00000567250 SLC22A6Q4U2R8 563 aa10.1□□□□□ -0.79
SF3B3-208ENST00000567250 NHLRC3Q5JS37 347 aa10.1□□□□□ -0.79
SF3B3-208ENST00000567250 C1orf100Q5SVJ3 147 aa10.1□□□□□ -0.79
SF3B3-208ENST00000567250 C22orf42Q6IC83 251 aa10.1□□□□□ -0.79
SF3B3-208ENST00000567250 FAHD2BQ6P2I3 314 aaPredicted RBP10.1□□□□□ -0.79
SF3B3-208ENST00000567250 GLIPR1L1Q6UWM5 242 aa10.1□□□□□ -0.79
SF3B3-208ENST00000567250 GDPGP1Q6ZNW5 385 aa10.1□□□□□ -0.79
SF3B3-208ENST00000567250 Q71RC1 249 aaPredicted RBP10.1□□□□□ -0.79
SF3B3-208ENST00000567250 BTN2A1Q7KYR7 527 aa10.1□□□□□ -0.79
SF3B3-208ENST00000567250 GDPD3Q7L5L3 318 aa10.1□□□□□ -0.79
SF3B3-208ENST00000567250 LURAP1LQ8IV03 231 aa10.1□□□□□ -0.79
SF3B3-208ENST00000567250 ZNRF1Q8ND25 227 aa10.1□□□□□ -0.79
SF3B3-208ENST00000567250 Q8NFD4 153 aa10.1□□□□□ -0.79
SF3B3-208ENST00000567250 OR51T1Q8NGJ9 327 aa10.1□□□□□ -0.79
SF3B3-208ENST00000567250 OR5D13Q8NGL4 314 aa10.1□□□□□ -0.79
SF3B3-208ENST00000567250 FAHD2AQ96GK7 314 aa10.1□□□□□ -0.79
SF3B3-208ENST00000567250 NUDT16L1Q9BRJ7 211 aaKnown RBP10.1□□□□□ -0.79
SF3B3-208ENST00000567250 SHARPINQ9H0F6 387 aa10.1□□□□□ -0.79
SF3B3-208ENST00000567250 TXNL4BQ9NX01 149 aaKnown RBP10.1□□□□□ -0.79
SF3B3-208ENST00000567250 RPUSD1Q9UJJ7 312 aaKnown RBP10.1□□□□□ -0.79
SF3B3-208ENST00000567250 MAB21L2Q9Y586 359 aa10.1□□□□□ -0.79
SF3B3-208ENST00000567250 CSPG4Q6UVK1 2322 aa10.1□□□□□ -0.79
SF3B3-208ENST00000567250 A0A1B0GW55 424 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 A0A1W2PQ09 198 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 FUOMA2VDF0 154 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 INAFM1C9JVW0 142 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 H3BUI4 141 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 K7N7A8 449 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 SLC17A2O00624 439 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 SLC22A1O15245 554 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 OR2H2O95918 312 aa10.09□□□□□ -0.79
SF3B3-208ENST00000567250 TK1P04183 234 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms