RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 ST8SIA3O43173 380 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 CRYGSP22914 178 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 GLP1RP43220 463 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 RAC1P63000 192 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 ZNF468Q5VIY5 522 aaPredicted RBP12.35□□□□□ -0.43
CDH1-209ENST00000566510 TMEM182Q6ZP80 229 aaPredicted RBP12.35□□□□□ -0.43
CDH1-209ENST00000566510 LHFPL2Q6ZUX7 228 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 RPS19BP1Q86WX3 136 aaKnown RBP12.35□□□□□ -0.43
CDH1-209ENST00000566510 LGI3Q8N145 548 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 GPR137CQ8N3F9 429 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 SUCNR1Q9BXA5 334 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 BCO1Q9HAY6 547 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 ATPIF1Q9UII2 106 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 SLC7A11Q9UPY5 501 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 RCL1Q9Y2P8 373 aaKnown RBP12.35□□□□□ -0.43
CDH1-209ENST00000566510 TIMM10BQ9Y5J6 103 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 WDFY4Q6ZS81 3184 aa12.35□□□□□ -0.43
CDH1-209ENST00000566510 NSG1A0A0A6YYJ2 146 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 UMODP07911 640 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 SEC11BP0C7V7 166 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 OR13C7P0DN81 318 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 OMGP23515 440 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 P2RY1P47900 373 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 CARD18P57730 90 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 MALLQ13021 153 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 CLINT1Q14677 625 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 GNMTQ14749 295 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 SPIN3Q5JUX0 258 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 DMBX1Q8NFW5 382 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 FAM213BQ8TBF2 198 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 HIST1H2BAQ96A08 127 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 INTS12Q96CB8 462 aaKnown RBP12.34□□□□□ -0.43
CDH1-209ENST00000566510 GALNT14Q96FL9 552 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 UBE2ZQ9H832 354 aaPredicted RBP12.34□□□□□ -0.43
CDH1-209ENST00000566510 P4HTMQ9NXG6 502 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 STARD10Q9Y365 291 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 UMAD1C9J7I0 102 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 ZNHIT1O43257 154 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 IGHV3-9P01782 118 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 COX6A1P12074 109 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 TCN2P20062 427 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 AADACP22760 399 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 ZNF92Q03936 586 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 HMGN3Q15651 99 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 SLC35G3Q8N808 338 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 CCDC54Q8NEL0 328 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 A0A1W2PPH5 198 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 A6NLC8 198 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 SLC33A1O00400 549 aaPredicted RBP12.34□□□□□ -0.43
CDH1-209ENST00000566510 CBR3O75828 277 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 TRAPPC6AO75865 159 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 ARG1P05089 322 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 ZNF806P0C7X5 589 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 ZNF14P17017 642 aaPredicted RBP12.34□□□□□ -0.43
CDH1-209ENST00000566510 PSG4Q00888 419 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 EIF2S3LQ2VIR3 472 aaKnown RBP12.34□□□□□ -0.43
CDH1-209ENST00000566510 LYSMD4Q5XG99 296 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 AAED1Q7RTV5 226 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 LYPD6BQ8NI32 183 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 TP53RKQ96S44 253 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 IFT22Q9H7X7 185 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 HS3ST3B1Q9Y662 390 aa12.34□□□□□ -0.43
CDH1-209ENST00000566510 CCDC163A0A0D9SF12 145 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 H7C1Q1 480 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 CXCL13O43927 109 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 IFNA4P05014 189 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 GLAP06280 429 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 CCL4P13236 92 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 CCNOP22674 350 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 RGS19P49795 217 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 CEBPGP53567 150 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 EXT1Q16394 746 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 HLA-BQ31612 363 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 IGSF11Q5DX21 431 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 GPR157Q5UAW9 335 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 Q6ZSR3 168 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 C5orf24Q7Z6I8 188 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 SAP25Q8TEE9 199 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 MSI2Q96DH6 328 aaKnown RBP12.33□□□□□ -0.44
CDH1-209ENST00000566510 C18orf12Q96KH6 178 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 IMMP1LQ96LU5 166 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 GPHA2Q96T91 129 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 WDR54Q9H977 334 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 KCNJ16Q9NPI9 418 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 TMEM38BQ9NVV0 291 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 ZDHHC8Q9ULC8 765 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 RFNGQ9Y644 331 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 FAM186AA6NE01 2351 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 A0A0G2JMM0 328 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 hCG_1809904A0A1W2PP81 198 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 A0A1W2PPB8 328 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 A0A1W2PR64 198 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 A0A1W2PRS3 328 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 A0A1W2PRV1 198 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 GJE1A6NN92 205 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 KIR3DP1A8MWS1 328 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 C9J4A7 227 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 CEACAM16Q2WEN9 425 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 TDHQ8IZJ6 230 aa12.33□□□□□ -0.44
CDH1-209ENST00000566510 FGFBP3Q8TAT2 258 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms