RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 DAZAP2Q15038 168 aaPredicted RBP16.15■□□□□ 0.18
CSPG4P13-201ENST00000565545 RGS21Q2M5E4 152 aa16.15■□□□□ 0.18
CSPG4P13-201ENST00000565545 CDNFQ49AH0 187 aa16.15■□□□□ 0.18
CSPG4P13-201ENST00000565545 Q6ZTK2 550 aa16.15■□□□□ 0.18
CSPG4P13-201ENST00000565545 C11orf53Q8IXP5 236 aa16.15■□□□□ 0.18
CSPG4P13-201ENST00000565545 FAM58AQ8N1B3 248 aa16.15■□□□□ 0.18
CSPG4P13-201ENST00000565545 OR10Z1Q8NGY1 313 aa16.15■□□□□ 0.18
CSPG4P13-201ENST00000565545 TRIM63Q969Q1 353 aa16.15■□□□□ 0.18
CSPG4P13-201ENST00000565545 MEGF10Q96KG7 1140 aa16.15■□□□□ 0.18
CSPG4P13-201ENST00000565545 HSF4Q9ULV5 492 aa16.15■□□□□ 0.18
CSPG4P13-201ENST00000565545 RBMX2Q9Y388 322 aaKnown RBP16.15■□□□□ 0.18
CSPG4P13-201ENST00000565545 SOCS1O15524 211 aa16.14■□□□□ 0.17
CSPG4P13-201ENST00000565545 SPRY3O43610 288 aa16.14■□□□□ 0.17
CSPG4P13-201ENST00000565545 CA11O75493 328 aa16.14■□□□□ 0.17
CSPG4P13-201ENST00000565545 RHBDL1O75783 438 aa16.14■□□□□ 0.17
CSPG4P13-201ENST00000565545 IGHV1-46P01743 117 aa16.14■□□□□ 0.17
CSPG4P13-201ENST00000565545 HIST1H1DP16402 221 aaKnown RBP16.14■□□□□ 0.17
CSPG4P13-201ENST00000565545 HOXB4P17483 251 aaPredicted RBP16.14■□□□□ 0.17
CSPG4P13-201ENST00000565545 CFHR2P36980 270 aa16.14■□□□□ 0.17
CSPG4P13-201ENST00000565545 TMEM50BP56557 158 aa16.14■□□□□ 0.17
CSPG4P13-201ENST00000565545 ERVK11-1P61568 191 aa16.14■□□□□ 0.17
CSPG4P13-201ENST00000565545 MPV17LQ2QL34 196 aa16.14■□□□□ 0.17
CSPG4P13-201ENST00000565545 POC1AQ8NBT0 407 aa16.14■□□□□ 0.17
CSPG4P13-201ENST00000565545 OR52I2Q8NH67 350 aa16.14■□□□□ 0.17
CSPG4P13-201ENST00000565545 GPX8Q8TED1 209 aa16.14■□□□□ 0.17
CSPG4P13-201ENST00000565545 GTF3AQ92664 365 aaKnown RBP16.14■□□□□ 0.17
CSPG4P13-201ENST00000565545 HS3ST6Q96QI5 342 aa16.14■□□□□ 0.17
CSPG4P13-201ENST00000565545 OR2V2Q96R30 315 aa16.14■□□□□ 0.17
CSPG4P13-201ENST00000565545 NRIP2Q9BQI9 281 aa16.14■□□□□ 0.17
CSPG4P13-201ENST00000565545 MS4A5Q9H3V2 200 aa16.14■□□□□ 0.17
CSPG4P13-201ENST00000565545 FN3KRPQ9HA64 309 aa16.14■□□□□ 0.17
CSPG4P13-201ENST00000565545 RBFOX1Q9NWB1 397 aaKnown RBP16.14■□□□□ 0.17
CSPG4P13-201ENST00000565545 ABCA4P78363 2273 aa16.14■□□□□ 0.17
CSPG4P13-201ENST00000565545 A6NLC8 198 aa16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 C17orf100A8MU93 164 aa16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 SERPINE3A8MV23 424 aa16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 H7C417 338 aa16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 RBBP9O75884 186 aa16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 ECDO95905 644 aaPredicted RBP16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 PLAUP00749 431 aa16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 LPLP06858 475 aa16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 GSTT2BP0CG30 244 aa16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 GABRR1P24046 479 aa16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 DNASE1P24855 282 aa16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 PMELP40967 661 aa16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 TNFAIP6P98066 277 aaPredicted RBP16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 ASAH1Q13510 395 aa16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 TAF9Q16594 264 aa16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 PLAC9Q5JTB6 97 aa16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 FAM209AQ5JX71 171 aa16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 FIP1L1Q6UN15 594 aaKnown RBP16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 LILRB1Q8NHL6 650 aaPredicted RBP16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 DEDD2Q8WXF8 326 aa16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 NEUROG1Q92886 237 aa16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 EMG1Q92979 244 aaKnown RBP16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 NEDD4LQ96PU5 975 aa16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 PECRQ9BY49 303 aa16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 CLEC4MQ9H2X3 399 aaPredicted RBP16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 LIME1Q9H400 295 aa16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 TAS2R8Q9NYW2 309 aa16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 MTFP1Q9UDX5 166 aa16.13■□□□□ 0.17
CSPG4P13-201ENST00000565545 MFNGO00587 321 aa16.12■□□□□ 0.17
CSPG4P13-201ENST00000565545 GEMIN2O14893 280 aaKnown RBP16.12■□□□□ 0.17
CSPG4P13-201ENST00000565545 CD3GP09693 182 aa16.12■□□□□ 0.17
CSPG4P13-201ENST00000565545 PRKACAP17612 351 aa16.12■□□□□ 0.17
CSPG4P13-201ENST00000565545 TNFRSF1AP19438 455 aa16.12■□□□□ 0.17
CSPG4P13-201ENST00000565545 GDNFP39905 211 aa16.12■□□□□ 0.17
CSPG4P13-201ENST00000565545 AP3S2P59780 193 aa16.12■□□□□ 0.17
CSPG4P13-201ENST00000565545 PCGF3Q3KNV8 242 aa16.12■□□□□ 0.17
CSPG4P13-201ENST00000565545 PRAMEF6Q5VXH4 476 aa16.12■□□□□ 0.17
CSPG4P13-201ENST00000565545 ZNF57Q68EA5 555 aaPredicted RBP16.12■□□□□ 0.17
CSPG4P13-201ENST00000565545 WDR82Q6UXN9 313 aa16.12■□□□□ 0.17
CSPG4P13-201ENST00000565545 MINDY2Q8NBR6 621 aa16.12■□□□□ 0.17
CSPG4P13-201ENST00000565545 SEH1LQ96EE3 360 aa16.12■□□□□ 0.17
CSPG4P13-201ENST00000565545 ARHGAP5-AS1Q96IT6 56 aa16.12■□□□□ 0.17
CSPG4P13-201ENST00000565545 C7orf50Q9BRJ6 194 aaKnown RBP16.12■□□□□ 0.17
CSPG4P13-201ENST00000565545 SPACA1Q9HBV2 294 aa16.12■□□□□ 0.17
CSPG4P13-201ENST00000565545 HES4Q9HCC6 221 aa16.12■□□□□ 0.17
CSPG4P13-201ENST00000565545 PLEKHJ1Q9NW61 149 aa16.12■□□□□ 0.17
CSPG4P13-201ENST00000565545 RASL12Q9NYN1 266 aa16.12■□□□□ 0.17
CSPG4P13-201ENST00000565545 PLEKHA6Q9Y2H5 1048 aa16.12■□□□□ 0.17
CSPG4P13-201ENST00000565545 AKAP6Q13023 2319 aa16.12■□□□□ 0.17
CSPG4P13-201ENST00000565545 MEIOCA2RUB1 952 aa16.11■□□□□ 0.17
CSPG4P13-201ENST00000565545 TMEM235A6NFC5 223 aa16.11■□□□□ 0.17
CSPG4P13-201ENST00000565545 F8VVB4 439 aa16.11■□□□□ 0.17
CSPG4P13-201ENST00000565545 F8VWA3 439 aa16.11■□□□□ 0.17
CSPG4P13-201ENST00000565545 ORC5O43913 435 aa16.11■□□□□ 0.17
CSPG4P13-201ENST00000565545 PDCD6O75340 191 aa16.11■□□□□ 0.17
CSPG4P13-201ENST00000565545 NXPH2O95156 264 aa16.11■□□□□ 0.17
CSPG4P13-201ENST00000565545 GNB3P16520 340 aa16.11■□□□□ 0.17
CSPG4P13-201ENST00000565545 FUT3P21217 361 aa16.11■□□□□ 0.17
CSPG4P13-201ENST00000565545 CHATP28329 748 aa16.11■□□□□ 0.17
CSPG4P13-201ENST00000565545 GNG2P59768 71 aa16.11■□□□□ 0.17
CSPG4P13-201ENST00000565545 ACTBP60709 375 aa16.11■□□□□ 0.17
CSPG4P13-201ENST00000565545 ACTG1P63261 375 aa16.11■□□□□ 0.17
CSPG4P13-201ENST00000565545 MPPED2Q15777 294 aa16.11■□□□□ 0.17
CSPG4P13-201ENST00000565545 PIGYQ3MUY2 71 aa16.11■□□□□ 0.17
CSPG4P13-201ENST00000565545 SPIN3Q5JUX0 258 aa16.11■□□□□ 0.17
CSPG4P13-201ENST00000565545 MUC15Q8N387 334 aa16.11■□□□□ 0.17
CSPG4P13-201ENST00000565545 TOMM5Q8N4H5 51 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms