RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 GABRA5P31644 462 aa12.67□□□□□ -0.38
CDH3-204ENST00000565453 POU3F4P49335 361 aa12.67□□□□□ -0.38
CDH3-204ENST00000565453 LGALS4P56470 323 aa12.67□□□□□ -0.38
CDH3-204ENST00000565453 ZNF146Q15072 292 aa12.67□□□□□ -0.38
CDH3-204ENST00000565453 LIAT1Q6ZQX7 453 aa12.67□□□□□ -0.38
CDH3-204ENST00000565453 LHFPL2Q6ZUX7 228 aa12.67□□□□□ -0.38
CDH3-204ENST00000565453 FAM58AQ8N1B3 248 aa12.67□□□□□ -0.38
CDH3-204ENST00000565453 OR51A4Q8NGJ6 313 aa12.67□□□□□ -0.38
CDH3-204ENST00000565453 OR13D1Q8NGV5 346 aa12.67□□□□□ -0.38
CDH3-204ENST00000565453 SPSB1Q96BD6 273 aa12.67□□□□□ -0.38
CDH3-204ENST00000565453 C4orf36Q96KX1 117 aa12.67□□□□□ -0.38
CDH3-204ENST00000565453 OPALINQ96PE5 141 aa12.67□□□□□ -0.38
CDH3-204ENST00000565453 ZNF649Q9BS31 505 aa12.67□□□□□ -0.38
CDH3-204ENST00000565453 RANBP3Q9H6Z4 567 aaPredicted RBP12.67□□□□□ -0.38
CDH3-204ENST00000565453 RAB18Q9NP72 206 aa12.67□□□□□ -0.38
CDH3-204ENST00000565453 HHLA2Q9UM44 414 aa12.67□□□□□ -0.38
CDH3-204ENST00000565453 TBL2Q9Y4P3 447 aaKnown RBP12.67□□□□□ -0.38
CDH3-204ENST00000565453 WNK1Q9H4A3 2382 aa12.67□□□□□ -0.38
CDH3-204ENST00000565453 IGKV1-12A0A0C4DH73 117 aa12.66□□□□□ -0.38
CDH3-204ENST00000565453 J3QLW9 94 aa12.66□□□□□ -0.38
CDH3-204ENST00000565453 IGKV1D-12P01611 117 aa12.66□□□□□ -0.38
CDH3-204ENST00000565453 MT-ND2P03891 347 aa12.66□□□□□ -0.38
CDH3-204ENST00000565453 ARG1P05089 322 aa12.66□□□□□ -0.38
CDH3-204ENST00000565453 ZNF19P17023 458 aa12.66□□□□□ -0.38
CDH3-204ENST00000565453 ZNF20P17024 532 aa12.66□□□□□ -0.38
CDH3-204ENST00000565453 PEX2P28328 305 aa12.66□□□□□ -0.38
CDH3-204ENST00000565453 DUSP1P28562 367 aa12.66□□□□□ -0.38
CDH3-204ENST00000565453 MTCP1P56278 107 aa12.66□□□□□ -0.38
CDH3-204ENST00000565453 PDZK1IP1Q13113 114 aa12.66□□□□□ -0.38
CDH3-204ENST00000565453 ALKBH1Q13686 389 aaKnown RBP12.66□□□□□ -0.38
CDH3-204ENST00000565453 EDDM3AQ14507 147 aa12.66□□□□□ -0.38
CDH3-204ENST00000565453 GRK1Q15835 563 aa12.66□□□□□ -0.38
CDH3-204ENST00000565453 PDLIM3Q53GG5 364 aaPredicted RBP12.66□□□□□ -0.38
CDH3-204ENST00000565453 CCBE1Q6UXH8 406 aaPredicted RBP12.66□□□□□ -0.38
CDH3-204ENST00000565453 TPRX1Q8N7U7 411 aa12.66□□□□□ -0.38
CDH3-204ENST00000565453 OR4S1Q8NGB4 309 aa12.66□□□□□ -0.38
CDH3-204ENST00000565453 OR4C13Q8NGP0 309 aa12.66□□□□□ -0.38
CDH3-204ENST00000565453 RHOXF1Q8NHV9 184 aa12.66□□□□□ -0.38
CDH3-204ENST00000565453 ZNF714Q96N38 554 aa12.66□□□□□ -0.38
CDH3-204ENST00000565453 SLC29A1Q99808 456 aa12.66□□□□□ -0.38
CDH3-204ENST00000565453 CHST6Q9GZX3 395 aa12.66□□□□□ -0.38
CDH3-204ENST00000565453 HMG20AQ9NP66 347 aa12.66□□□□□ -0.38
CDH3-204ENST00000565453 MYRFQ9Y2G1 1151 aa12.66□□□□□ -0.38
CDH3-204ENST00000565453 GMPPBQ9Y5P6 360 aa12.66□□□□□ -0.38
CDH3-204ENST00000565453 LINC00312Q9Y6C7 94 aa12.66□□□□□ -0.38
CDH3-204ENST00000565453 hADV38S2A0JD32 116 aa12.65□□□□□ -0.38
CDH3-204ENST00000565453 SNTNA6NMZ2 147 aa12.65□□□□□ -0.38
CDH3-204ENST00000565453 KDM4BO94953 1096 aa12.65□□□□□ -0.38
CDH3-204ENST00000565453 CYB5AP00167 134 aa12.65□□□□□ -0.38
CDH3-204ENST00000565453 CALCBP10092 127 aa12.65□□□□□ -0.38
CDH3-204ENST00000565453 DBTP11182 482 aaKnown RBP12.65□□□□□ -0.38
CDH3-204ENST00000565453 PRKACAP17612 351 aa12.65□□□□□ -0.38
CDH3-204ENST00000565453 GABRR1P24046 479 aa12.65□□□□□ -0.38
CDH3-204ENST00000565453 ERP29P30040 261 aaKnown RBP12.65□□□□□ -0.38
CDH3-204ENST00000565453 OR3A1P47881 315 aa12.65□□□□□ -0.38
CDH3-204ENST00000565453 ACTA2P62736 377 aa12.65□□□□□ -0.38
CDH3-204ENST00000565453 ACTG2P63267 376 aa12.65□□□□□ -0.38
CDH3-204ENST00000565453 GALEQ14376 348 aa12.65□□□□□ -0.38
CDH3-204ENST00000565453 HERPUD1Q15011 391 aa12.65□□□□□ -0.38
CDH3-204ENST00000565453 SPIN3Q5JUX0 258 aa12.65□□□□□ -0.38
CDH3-204ENST00000565453 CCDC121Q6ZUS5 278 aa12.65□□□□□ -0.38
CDH3-204ENST00000565453 LHFPL3Q86UP9 236 aa12.65□□□□□ -0.38
CDH3-204ENST00000565453 SYS1Q8N2H4 156 aa12.65□□□□□ -0.38
CDH3-204ENST00000565453 OR13C9Q8NGT0 318 aa12.65□□□□□ -0.38
CDH3-204ENST00000565453 RFT1Q96AA3 541 aa12.65□□□□□ -0.38
CDH3-204ENST00000565453 FOXRED1Q96CU9 486 aaPredicted RBP12.65□□□□□ -0.38
CDH3-204ENST00000565453 MALSU1Q96EH3 234 aa12.65□□□□□ -0.38
CDH3-204ENST00000565453 ALG8Q9BVK2 526 aa12.65□□□□□ -0.38
CDH3-204ENST00000565453 ISG20L2Q9H9L3 353 aaKnown RBP12.65□□□□□ -0.38
CDH3-204ENST00000565453 TCF19Q9Y242 345 aa12.65□□□□□ -0.38
CDH3-204ENST00000565453 A6NDX4 124 aa12.64□□□□□ -0.39
CDH3-204ENST00000565453 MGST3O14880 152 aa12.64□□□□□ -0.39
CDH3-204ENST00000565453 RAB13P51153 203 aa12.64□□□□□ -0.39
CDH3-204ENST00000565453 SNU13P55769 128 aaKnown RBP12.64□□□□□ -0.39
CDH3-204ENST00000565453 PLA1AQ53H76 456 aa12.64□□□□□ -0.39
CDH3-204ENST00000565453 C11orf88Q6PI97 169 aa12.64□□□□□ -0.39
CDH3-204ENST00000565453 OR13C3Q8NGS6 347 aa12.64□□□□□ -0.39
CDH3-204ENST00000565453 CFHR4Q92496 578 aa12.64□□□□□ -0.39
CDH3-204ENST00000565453 SPACA5Q96QH8 159 aa12.64□□□□□ -0.39
CDH3-204ENST00000565453 C9orf16Q9BUW7 83 aa12.64□□□□□ -0.39
CDH3-204ENST00000565453 CDCA4Q9BXL8 241 aa12.64□□□□□ -0.39
CDH3-204ENST00000565453 ZNF702PQ9H963 129 aa12.64□□□□□ -0.39
CDH3-204ENST00000565453 FOXJ3Q9UPW0 622 aa12.64□□□□□ -0.39
CDH3-204ENST00000565453 SESN1Q9Y6P5 492 aa12.64□□□□□ -0.39
CDH3-204ENST00000565453 VWFP04275 2813 aa12.63□□□□□ -0.39
CDH3-204ENST00000565453 E9PI62 339 aa12.63□□□□□ -0.39
CDH3-204ENST00000565453 SIRPB1O00241 398 aa12.63□□□□□ -0.39
CDH3-204ENST00000565453 MPZL2O60487 215 aa12.63□□□□□ -0.39
CDH3-204ENST00000565453 MMP23AO75900 390 aa12.63□□□□□ -0.39
CDH3-204ENST00000565453 ALX3O95076 343 aa12.63□□□□□ -0.39
CDH3-204ENST00000565453 LMO1P25800 156 aa12.63□□□□□ -0.39
CDH3-204ENST00000565453 DYNLT3P51808 116 aa12.63□□□□□ -0.39
CDH3-204ENST00000565453 P2RX3P56373 397 aa12.63□□□□□ -0.39
CDH3-204ENST00000565453 FAM189A2Q15884 450 aa12.63□□□□□ -0.39
CDH3-204ENST00000565453 SSX2Q16385 188 aa12.63□□□□□ -0.39
CDH3-204ENST00000565453 C2orf68Q2NKX9 166 aa12.63□□□□□ -0.39
CDH3-204ENST00000565453 SAXO1Q8IYX7 474 aa12.63□□□□□ -0.39
CDH3-204ENST00000565453 Q8N2B8 174 aa12.63□□□□□ -0.39
CDH3-204ENST00000565453 KLHDC1Q8N7A1 406 aa12.63□□□□□ -0.39
CDH3-204ENST00000565453 ZNF676Q8N7Q3 588 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms