RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 PCDHGB5Q9Y5G0 923 aa5.2□□□□□ -1.58
TCF4-228ENST00000565393 ANK3Q12955 4377 aaKnown RBP5.2□□□□□ -1.58
TCF4-228ENST00000565393 SVEP1Q4LDE5 3571 aa5.2□□□□□ -1.58
TCF4-228ENST00000565393 LOC107986453A0A1B0GWG9 222 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 TMEM82A0PJX8 343 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 FUOMA2VDF0 154 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 FAM90A8PA6NJQ4 464 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 SIRPB1O00241 398 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 DEGS1O15121 323 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 SLC16A6O15403 523 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 PSPNO60542 156 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 ZNF737O75373 536 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 IGHA1P01876 353 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 TMEM225BP0DP42 221 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 BCL3P20749 454 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 AZGP1P25311 298 aaKnown RBP5.19□□□□□ -1.58
TCF4-228ENST00000565393 KIR3DL2P43630 455 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 EFNB2P52799 333 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 EMX1Q04741 257 aaPredicted RBP5.19□□□□□ -1.58
TCF4-228ENST00000565393 AESQ08117 197 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 PDZK1IP1Q13113 114 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 HABP2Q14520 560 aaPredicted RBP5.19□□□□□ -1.58
TCF4-228ENST00000565393 NSUN5P1Q3KNT7 163 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 MEDAGQ5VYS4 303 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 CCBE1Q6UXH8 406 aaPredicted RBP5.19□□□□□ -1.58
TCF4-228ENST00000565393 LIAT1Q6ZQX7 453 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 LHFPL2Q6ZUX7 228 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 LHFPL3Q86UP9 236 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 TMEM219Q86XT9 240 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 Q8IYB0 196 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 DYNAPQ8N1N2 210 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 ABHD12Q8N2K0 398 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 ACBD7Q8N6N7 88 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 KLHDC1Q8N7A1 406 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 DNAAF1Q8NEP3 725 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 OR4S1Q8NGB4 309 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 OR11H6Q8NGC7 330 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 OR5D14Q8NGL3 314 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 RFT1Q96AA3 541 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 ADAT3Q96EY9 351 aaPredicted RBP5.19□□□□□ -1.58
TCF4-228ENST00000565393 MRPL48Q96GC5 212 aaKnown RBP5.19□□□□□ -1.58
TCF4-228ENST00000565393 HRASLS5Q96KN8 279 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 MYCBPQ99417 103 aaPredicted RBP5.19□□□□□ -1.58
TCF4-228ENST00000565393 GABARAPL3Q9BY60 117 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 CHST5Q9GZS9 411 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 TMEM133Q9H2Q1 129 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 HMG20AQ9NP66 347 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 RBFOX1Q9NWB1 397 aaKnown RBP5.19□□□□□ -1.58
TCF4-228ENST00000565393 AASSQ9UDR5 926 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 PITPNC1Q9UKF7 332 aa5.19□□□□□ -1.58
TCF4-228ENST00000565393 TRGV10A0A0A0MS01 117 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 IGKV1-9A0A0C4DH69 117 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 A0A0G2JK05 382 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 A6NDX4 124 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 F2RL2O00254 374 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 TOR1AO14656 332 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 EI24O14681 340 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 MGST3O14880 152 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 MAGEB3O15480 346 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 CHST1O43916 411 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 RBP4P02753 201 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 ISG15P05161 165 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 HCKP08631 526 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 ZNF44P15621 663 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 CD24P25063 80 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 HTR1DP28221 377 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 BRS3P32247 399 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 GLIPR1P48060 266 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 CCR9P51686 369 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 PRRX1P54821 245 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 DLX6P56179 175 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 NANOS3P60323 173 aaKnown RBP5.18□□□□□ -1.58
TCF4-228ENST00000565393 SNRPGP62308 76 aaKnown RBP5.18□□□□□ -1.58
TCF4-228ENST00000565393 BLCAPP62952 87 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 ALKBH1Q13686 389 aaKnown RBP5.18□□□□□ -1.58
TCF4-228ENST00000565393 GALEQ14376 348 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 SPIN3Q5JUX0 258 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 SLC25A30Q5SVS4 291 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 MINOS1Q5TGZ0 78 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 ZNF626Q68DY1 528 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 OR52W1Q6IF63 320 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 CRIP3Q6Q6R5 217 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 ZBTB49Q6ZSB9 765 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 CCDC121Q6ZUS5 278 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 UTS2BQ765I0 119 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 CENPVQ7Z7K6 275 aaPredicted RBP5.18□□□□□ -1.58
TCF4-228ENST00000565393 SATL1Q86VE3 508 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 SERPINA12Q8IW75 414 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 CBR4Q8N4T8 237 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 OR5D18Q8NGL1 313 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 OR13C9Q8NGT0 318 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 CAPSLQ8WWF8 208 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 FOXRED1Q96CU9 486 aaPredicted RBP5.18□□□□□ -1.58
TCF4-228ENST00000565393 C4orf36Q96KX1 117 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 Q96MT0 163 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 OPALINQ96PE5 141 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 SPACA5Q96QH8 159 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 NR1H4Q96RI1 486 aaPredicted RBP5.18□□□□□ -1.58
TCF4-228ENST00000565393 CDCA4Q9BXL8 241 aa5.18□□□□□ -1.58
TCF4-228ENST00000565393 CLEC7AQ9BXN2 247 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms