RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 A6NJ64 397 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 NOS1APO75052 506 aaPredicted RBP9.34□□□□□ -0.91
SF3B3-205ENST00000564899 NXPH2O95156 264 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 CD8AP01732 235 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 HEXAP06865 529 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 CHRM2P08172 466 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 ACAA1P09110 424 aaPredicted RBP9.34□□□□□ -0.91
SF3B3-205ENST00000564899 PRKACAP17612 351 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 GABRR1P24046 479 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 PMELP40967 661 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 NR4A2P43354 598 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 PITPNBP48739 271 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 VEGFCP49767 419 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 SNU13P55769 128 aaKnown RBP9.34□□□□□ -0.91
SF3B3-205ENST00000564899 RBM11P57052 281 aaKnown RBP9.34□□□□□ -0.91
SF3B3-205ENST00000564899 GMFBP60983 142 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 ERVK11-1P61568 191 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 PIGYQ3MUY2 71 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 MOGAT2Q3SYC2 334 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 RAB12Q6IQ22 244 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 FAM58AQ8N1B3 248 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 OR56B1Q8NGI3 324 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 OR11L1Q8NGX0 322 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 Q8TCH9 128 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 Q96M66 194 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 CACNG6Q9BXT2 260 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 GCM1Q9NP62 436 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 IL36RNQ9UBH0 155 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 PPP1R3CQ9UQK1 317 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 LAMP3Q9UQV4 416 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 ST3GAL6Q9Y274 331 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 MRPS7Q9Y2R9 242 aaKnown RBP9.34□□□□□ -0.91
SF3B3-205ENST00000564899 ARID1AO14497 2285 aa9.34□□□□□ -0.91
SF3B3-205ENST00000564899 TRAV18A0A075B6X5 111 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 A0A0G2JMP0 313 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 A0A0X1KG70 313 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 C3orf80F5H4A9 247 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 J3QRK9 145 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 RAB27BO00194 218 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 GEMIN2O14893 280 aaKnown RBP9.33□□□□□ -0.92
SF3B3-205ENST00000564899 XRCC3O43542 346 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 IRF2P14316 349 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 EGR1P18146 543 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 GLRA1P23415 457 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 CFHR2P36980 270 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 TAS2R20P59543 309 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 IL13RA2Q14627 380 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 ZNF79Q15937 498 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 TAF9Q16594 264 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 PYDC2Q56P42 97 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 NHLRC3Q5JS37 347 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 PYHIN1Q6K0P9 492 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 FIP1L1Q6UN15 594 aaKnown RBP9.33□□□□□ -0.92
SF3B3-205ENST00000564899 C20orf204Q6ZNR8 217 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 SNX29P2Q8IUI4 249 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 FAM89BQ8N5H3 189 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 BOLLQ8N9W6 283 aaKnown RBP9.33□□□□□ -0.92
SF3B3-205ENST00000564899 CHST4Q8NCG5 386 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 OR4M2Q8NGB6 313 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 OR10R2Q8NGX6 335 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 HPS1Q92902 700 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 SOSTQ9BQB4 213 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 RAB1BQ9H0U4 201 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 PLEKHF2Q9H8W4 249 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 HES4Q9HCC6 221 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 RNF7Q9UBF6 113 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 RABL2AQ9UBK7 228 aaPredicted RBP9.33□□□□□ -0.92
SF3B3-205ENST00000564899 RABL2BQ9UNT1 228 aa9.33□□□□□ -0.92
SF3B3-205ENST00000564899 LRRC30A6NM36 301 aa9.32□□□□□ -0.92
SF3B3-205ENST00000564899 SRRM5B3KS81 715 aa9.32□□□□□ -0.92
SF3B3-205ENST00000564899 INAFM1C9JVW0 142 aa9.32□□□□□ -0.92
SF3B3-205ENST00000564899 WNT9BO14905 357 aa9.32□□□□□ -0.92
SF3B3-205ENST00000564899 SOCS1O15524 211 aa9.32□□□□□ -0.92
SF3B3-205ENST00000564899 OR7C1O76099 320 aaPredicted RBP9.32□□□□□ -0.92
SF3B3-205ENST00000564899 CYB5R3P00387 301 aaPredicted RBP9.32□□□□□ -0.92
SF3B3-205ENST00000564899 HPXP02790 462 aa9.32□□□□□ -0.92
SF3B3-205ENST00000564899 PTBP1P26599 531 aaKnown RBP eCLIP9.32□□□□□ -0.92
SF3B3-205ENST00000564899 CD40LGP29965 261 aa9.32□□□□□ -0.92
SF3B3-205ENST00000564899 BLVRBP30043 206 aaPredicted RBP9.32□□□□□ -0.92
SF3B3-205ENST00000564899 MNDAP41218 407 aa9.32□□□□□ -0.92
SF3B3-205ENST00000564899 PTH2RP49190 550 aa9.32□□□□□ -0.92
SF3B3-205ENST00000564899 PPP5CP53041 499 aa9.32□□□□□ -0.92
SF3B3-205ENST00000564899 HOXA4Q00056 320 aaPredicted RBP9.32□□□□□ -0.92
SF3B3-205ENST00000564899 PITPNAQ00169 270 aa9.32□□□□□ -0.92
SF3B3-205ENST00000564899 MPV17LQ2QL34 196 aa9.32□□□□□ -0.92
SF3B3-205ENST00000564899 SMIM21Q3B7S5 101 aa9.32□□□□□ -0.92
SF3B3-205ENST00000564899 NKAPLQ5M9Q1 402 aa9.32□□□□□ -0.92
SF3B3-205ENST00000564899 ACP7Q6ZNF0 438 aa9.32□□□□□ -0.92
SF3B3-205ENST00000564899 LINC00596Q86U02 117 aa9.32□□□□□ -0.92
SF3B3-205ENST00000564899 GCSAMQ8N6F7 178 aa9.32□□□□□ -0.92
SF3B3-205ENST00000564899 C15orf40Q8WUR7 153 aa9.32□□□□□ -0.92
SF3B3-205ENST00000564899 RAB3CQ96E17 227 aa9.32□□□□□ -0.92
SF3B3-205ENST00000564899 NUDT16L1Q9BRJ7 211 aaKnown RBP9.32□□□□□ -0.92
SF3B3-205ENST00000564899 SRRQ9GZT4 340 aa9.32□□□□□ -0.92
SF3B3-205ENST00000564899 WDR13Q9H1Z4 485 aa9.32□□□□□ -0.92
SF3B3-205ENST00000564899 TREM2Q9NZC2 230 aa9.32□□□□□ -0.92
SF3B3-205ENST00000564899 NPTNQ9Y639 398 aa9.32□□□□□ -0.92
SF3B3-205ENST00000564899 IGHV1-69-2A0A0G2JMI3 117 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 FAM90A10PA6NDY2 464 aa9.31□□□□□ -0.92
SF3B3-205ENST00000564899 FAM90A18PA6NE21 464 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms