RNA–Protein interactions for RNA: ENST00000564343.5

TCF4-223, Transcript of transcription factor 4, human

TSL 4

Gene TCF4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-223	ENST00000564343	FANK1	Q8TC84	345 aa		4.13	□□□□□ -1.75
TCF4-223	ENST00000564343	SGK3	Q96BR1	496 aa		4.13	□□□□□ -1.75
TCF4-223	ENST00000564343	SLAMF6	Q96DU3	332 aa		4.13	□□□□□ -1.75
TCF4-223	ENST00000564343	REEP6	Q96HR9	211 aa		4.13	□□□□□ -1.75
TCF4-223	ENST00000564343	C7orf34	Q96L11	122 aa		4.13	□□□□□ -1.75
TCF4-223	ENST00000564343	RAB3IP	Q96QF0	476 aa	Predicted RBP	4.13	□□□□□ -1.75
TCF4-223	ENST00000564343	COPS4	Q9BT78	406 aa		4.13	□□□□□ -1.75
TCF4-223	ENST00000564343	IFT27	Q9BW83	186 aa		4.13	□□□□□ -1.75
TCF4-223	ENST00000564343	DNTTIP1	Q9H147	329 aa		4.13	□□□□□ -1.75
TCF4-223	ENST00000564343	SP140L	Q9H930	580 aa		4.13	□□□□□ -1.75
TCF4-223	ENST00000564343	C19orf12	Q9NSK7	152 aa		4.13	□□□□□ -1.75
TCF4-223	ENST00000564343	CENPM	Q9NSP4	180 aa		4.13	□□□□□ -1.75
TCF4-223	ENST00000564343	RHBDD3	Q9Y3P4	386 aa		4.13	□□□□□ -1.75
TCF4-223	ENST00000564343	COMMD3-BMI1	R4GMX3	469 aa		4.13	□□□□□ -1.75
TCF4-223	ENST00000564343	KIAA2026	Q5HYC2	2103 aa		4.13	□□□□□ -1.75
TCF4-223	ENST00000564343	LYST	Q99698	3801 aa		4.13	□□□□□ -1.75
TCF4-223	ENST00000564343	EPPK1	P58107	5090 aa	Known RBP	4.13	□□□□□ -1.75
TCF4-223	ENST00000564343	hCG_38984	A0A1B0GV85	526 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343		A6NDX4	124 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	NKX6-3	A6NJ46	265 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	OR2AT4	A6NND4	320 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	ZNF850	A8MQ14	1090 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	BBIP1	A8MTZ0	92 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	VGLL3	A8MV65	326 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	RRH	O14718	337 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	RHBDL1	O75783	438 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	GYPB	P06028	91 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	SPARC	P09486	303 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	CLU	P10909	449 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	PSG2	P11465	335 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	CCL3L1	P16619	93 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	GLRA1	P23415	457 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	COX7A1	P24310	79 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	ACKR3	P25106	362 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	HOXD3	P31249	432 aa	Predicted RBP	4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	SLC6A6	P31641	620 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	DCTD	P32321	178 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	NAA10	P41227	235 aa	Predicted RBP	4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	GABRA2	P47869	451 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	CX3CR1	P49238	355 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	GSK3B	P49841	420 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	SLC7A2	P52569	658 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	LIPE	Q05469	1076 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	EGFEM1P	Q0D2K5	195 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	DCTN2	Q13561	401 aa	Known RBP	4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	FAM76B	Q5HYJ3	339 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	DMRTC1	Q5HYR2	192 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	TCTEX1D4	Q5JR98	221 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	PRSS45	Q7RTY3	260 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	CYP4Z1	Q86W10	505 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	FAM185A	Q8N0U4	392 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	LINC00471	Q8N535	108 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	TMEM185A	Q8NFB2	350 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	PROKR2	Q8NFJ6	384 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	OR5AU1	Q8NGC0	362 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	OR10Z1	Q8NGY1	313 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	HPSE2	Q8WWQ2	592 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	RCN3	Q96D15	328 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	MED30	Q96HR3	178 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	ATP6V1G3	Q96LB4	118 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	B9D2	Q9BPU9	175 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	PAPOLG	Q9BWT3	736 aa	Known RBP	4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	OPA3	Q9H6K4	179 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	EGLN3	Q9H6Z9	239 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	SAR1A	Q9NR31	198 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	INTS9	Q9NV88	658 aa	Known RBP	4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	GID8	Q9NWU2	228 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	NLK	Q9UBE8	527 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	KCNG2	Q9UJ96	466 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	ZNF222	Q9UK12	451 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	TCF19	Q9Y242	345 aa		4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.12	□□□□□ -1.75
TCF4-223	ENST00000564343	TENM2	Q9NT68	2774 aa		4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	DHRS12	A0PJE2	317 aa		4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	MEX3A	A1L020	520 aa	Known RBP	4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	ZNF878	C9JN71	531 aa		4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	ZNF593	O00488	134 aa	Predicted RBP	4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	LDLRAD4	O15165	306 aa		4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	SYNGR1	O43759	233 aa		4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	IDH3B	O43837	385 aa		4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	GADD45G	O95257	159 aa		4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	VDAC2	P45880	294 aa	Predicted RBP	4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	GSS	P48637	474 aa		4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	CEBPD	P49716	269 aa	Predicted RBP	4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	ENTPD1	P49961	510 aa		4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	GPM6A	P51674	278 aa		4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	ZNF121	P58317	390 aa	Predicted RBP	4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	SLC35A2	P78381	396 aa		4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	EFNB1	P98172	346 aa		4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	IL5RA	Q01344	420 aa		4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	PRDX4	Q13162	271 aa		4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	ZNF273	Q14593	569 aa		4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	IL13RA2	Q14627	380 aa		4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	TAF13	Q15543	124 aa		4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	SSX2	Q16385	188 aa		4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	CGB2	Q6NT52	195 aa		4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	C8orf82	Q6P1X6	216 aa	Predicted RBP	4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	C10orf99	Q6UWK7	81 aa		4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	CCDC121	Q6ZUS5	278 aa		4.11	□□□□□ -1.75
TCF4-223	ENST00000564343	KCTD8	Q6ZWB6	473 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms