RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 PATE4P0C8F1 98 aa11.12□□□□□ -0.63
COMMD4-209ENST00000564068 SPINK2P20155 84 aa11.12□□□□□ -0.63
COMMD4-209ENST00000564068 GDF1P27539 372 aa11.12□□□□□ -0.63
COMMD4-209ENST00000564068 ERVK-16P61578 105 aa11.12□□□□□ -0.63
COMMD4-209ENST00000564068 TMEM241Q24JQ0 296 aa11.12□□□□□ -0.63
COMMD4-209ENST00000564068 ZNF385CQ66K41 422 aaPredicted RBP11.12□□□□□ -0.63
COMMD4-209ENST00000564068 CYB5R2Q6BCY4 276 aa11.12□□□□□ -0.63
COMMD4-209ENST00000564068 PPP1R3BQ86XI6 285 aa11.12□□□□□ -0.63
COMMD4-209ENST00000564068 ZNF808Q8N4W9 903 aaPredicted RBP11.12□□□□□ -0.63
COMMD4-209ENST00000564068 RNF133Q8WVZ7 376 aa11.12□□□□□ -0.63
COMMD4-209ENST00000564068 AQP3Q92482 292 aa11.12□□□□□ -0.63
COMMD4-209ENST00000564068 MS4A10Q96PG2 267 aa11.12□□□□□ -0.63
COMMD4-209ENST00000564068 PLA2G2FQ9BZM2 168 aa11.12□□□□□ -0.63
COMMD4-209ENST00000564068 HEATR5BQ9P2D3 2071 aa11.12□□□□□ -0.63
COMMD4-209ENST00000564068 ELOA3CA0A087WX78 387 aaPredicted RBP11.12□□□□□ -0.63
COMMD4-209ENST00000564068 CHST1O43916 411 aa11.12□□□□□ -0.63
COMMD4-209ENST00000564068 DHRS3O75911 302 aa11.12□□□□□ -0.63
COMMD4-209ENST00000564068 FUT3P21217 361 aa11.12□□□□□ -0.63
COMMD4-209ENST00000564068 APLNRP35414 380 aa11.12□□□□□ -0.63
COMMD4-209ENST00000564068 GALR1P47211 349 aa11.12□□□□□ -0.63
COMMD4-209ENST00000564068 KRTDAPP60985 99 aa11.12□□□□□ -0.63
COMMD4-209ENST00000564068 FUT7Q11130 342 aa11.12□□□□□ -0.63
COMMD4-209ENST00000564068 LIAT1Q6ZQX7 453 aa11.12□□□□□ -0.63
COMMD4-209ENST00000564068 DMBX1Q8NFW5 382 aa11.12□□□□□ -0.63
COMMD4-209ENST00000564068 EXTL1Q92935 676 aa11.12□□□□□ -0.63
COMMD4-209ENST00000564068 ALKBH3Q96Q83 286 aaPredicted RBP11.12□□□□□ -0.63
COMMD4-209ENST00000564068 GPX7Q96SL4 187 aaPredicted RBP11.12□□□□□ -0.63
COMMD4-209ENST00000564068 MSL2Q9HCI7 577 aa11.12□□□□□ -0.63
COMMD4-209ENST00000564068 RNF150Q9ULK6 438 aa11.12□□□□□ -0.63
COMMD4-209ENST00000564068 PSME4Q14997 1843 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 MAP1LC3B2A6NCE7 125 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 NKX2-6A6NCS4 301 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 MT-CO2P00403 227 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 CTSBP07858 339 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 DDTP30046 118 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 PTX4Q96A99 478 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 BTF3L4Q96K17 158 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 UHRF2Q96PU4 802 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 MAP1LC3BQ9GZQ8 125 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 PARD6AQ9NPB6 346 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 HEYLQ9NQ87 328 aaPredicted RBP11.11□□□□□ -0.63
COMMD4-209ENST00000564068 DMRT1Q9Y5R6 373 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 AUP1Q9Y679 476 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 CLEC18AA5D8T8 446 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 E9PQ18 207 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 C17orf112F2Z3M2 114 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 CST2P09228 141 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 CXCL12P48061 93 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 FOXL2P58012 376 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 DCDP81605 110 aaKnown RBP11.11□□□□□ -0.63
COMMD4-209ENST00000564068 YRDCQ86U90 279 aaKnown RBP11.11□□□□□ -0.63
COMMD4-209ENST00000564068 SLC35G3Q8N808 338 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 CLEC18CQ8NCF0 446 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 ELSPBP1Q96BH3 223 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 MRGPRX4Q96LA9 322 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 SH3BGRL3Q9H299 93 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 IL17BQ9UHF5 180 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 WDR81Q562E7 1941 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 CEP250Q9BV73 2442 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 IL11P20809 199 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 CDX1P47902 265 aaPredicted RBP11.11□□□□□ -0.63
COMMD4-209ENST00000564068 GABRA4P48169 554 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 GAMTQ14353 236 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 C1orf100Q5SVJ3 147 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 OR5AS1Q8N127 324 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 OR10A7Q8NGE5 316 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 OR4A4PQ8NGN8 299 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 TREM2Q9NZC2 230 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 SIT1Q9Y3P8 196 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 ESPL1Q14674 2120 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 TGIF2-C20orf24A0A0A6YYL0 155 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 TNFSF14O43557 240 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 GAPDHP04406 335 aaKnown RBP11.11□□□□□ -0.63
COMMD4-209ENST00000564068 MGST1P10620 155 aaKnown RBP11.11□□□□□ -0.63
COMMD4-209ENST00000564068 MST1P26927 711 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 CATR1Q13166 79 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 VAX1Q5SQQ9 334 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 FHL5Q5TD97 284 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 ASB10Q8WXI3 467 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 ERGIC1Q969X5 290 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 SLC2A8Q9NY64 477 aa11.11□□□□□ -0.63
COMMD4-209ENST00000564068 MGAMO43451 1857 aa11.1□□□□□ -0.63
COMMD4-209ENST00000564068 SPTY2D1-AS1A0A0U1RR47 76 aa11.1□□□□□ -0.63
COMMD4-209ENST00000564068 MBPP02686 304 aaPredicted RBP11.1□□□□□ -0.63
COMMD4-209ENST00000564068 OPN1MWP04001 364 aa11.1□□□□□ -0.63
COMMD4-209ENST00000564068 FBP1P09467 338 aa11.1□□□□□ -0.63
COMMD4-209ENST00000564068 PGA3P0DJD8 388 aa11.1□□□□□ -0.63
COMMD4-209ENST00000564068 OPN1MW2P0DN77 364 aa11.1□□□□□ -0.63
COMMD4-209ENST00000564068 OPN1MW3P0DN78 364 aa11.1□□□□□ -0.63
COMMD4-209ENST00000564068 ROM1Q03395 351 aa11.1□□□□□ -0.63
COMMD4-209ENST00000564068 CLN3Q13286 438 aa11.1□□□□□ -0.63
COMMD4-209ENST00000564068 SMAD4Q13485 552 aaKnown RBP11.1□□□□□ -0.63
COMMD4-209ENST00000564068 HABP2Q14520 560 aaPredicted RBP11.1□□□□□ -0.63
COMMD4-209ENST00000564068 LHFPL2Q6ZUX7 228 aa11.1□□□□□ -0.63
COMMD4-209ENST00000564068 OR11L1Q8NGX0 322 aa11.1□□□□□ -0.63
COMMD4-209ENST00000564068 BORCS7Q96B45 105 aa11.1□□□□□ -0.63
COMMD4-209ENST00000564068 SLC25A22Q9H936 323 aa11.1□□□□□ -0.63
COMMD4-209ENST00000564068 TRAPPC1Q9Y5R8 145 aa11.1□□□□□ -0.63
COMMD4-209ENST00000564068 FREM3P0C091 2139 aa11.1□□□□□ -0.63
COMMD4-209ENST00000564068 A0A096LPE4 126 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms