RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 ZNF146Q15072 292 aa16.29■□□□□ 0.2
CMTM3-207ENST00000564060 OR8H2Q8N162 312 aa16.29■□□□□ 0.2
CMTM3-207ENST00000564060 ZSCAN4Q8NAM6 433 aaPredicted RBP16.29■□□□□ 0.2
CMTM3-207ENST00000564060 GGHQ92820 318 aa16.29■□□□□ 0.2
CMTM3-207ENST00000564060 RFT1Q96AA3 541 aa16.29■□□□□ 0.2
CMTM3-207ENST00000564060 RBFOX1Q9NWB1 397 aaKnown RBP16.29■□□□□ 0.2
CMTM3-207ENST00000564060 ZNF281Q9Y2X9 895 aa16.29■□□□□ 0.2
CMTM3-207ENST00000564060 SF3B6Q9Y3B4 125 aaKnown RBP16.29■□□□□ 0.2
CMTM3-207ENST00000564060 H0YJX3 145 aa16.28■□□□□ 0.2
CMTM3-207ENST00000564060 OGG1O15527 345 aa16.28■□□□□ 0.2
CMTM3-207ENST00000564060 ZNF737O75373 536 aa16.28■□□□□ 0.2
CMTM3-207ENST00000564060 KDM4BO94953 1096 aa16.28■□□□□ 0.2
CMTM3-207ENST00000564060 MELTFP08582 738 aa16.28■□□□□ 0.2
CMTM3-207ENST00000564060 PRKACAP17612 351 aa16.28■□□□□ 0.2
CMTM3-207ENST00000564060 NPBWR2P48146 333 aa16.28■□□□□ 0.2
CMTM3-207ENST00000564060 KISS1Q15726 138 aa16.28■□□□□ 0.2
CMTM3-207ENST00000564060 C16orf87Q6PH81 154 aa16.28■□□□□ 0.2
CMTM3-207ENST00000564060 LDLRAD3Q86YD5 345 aa16.28■□□□□ 0.2
CMTM3-207ENST00000564060 STX19Q8N4C7 294 aa16.28■□□□□ 0.2
CMTM3-207ENST00000564060 FBLIM1Q8WUP2 373 aa16.28■□□□□ 0.2
CMTM3-207ENST00000564060 TFAP2CQ92754 450 aa16.28■□□□□ 0.2
CMTM3-207ENST00000564060 TNFRSF14Q92956 283 aa16.28■□□□□ 0.2
CMTM3-207ENST00000564060 VCX3BQ9H321 246 aa16.28■□□□□ 0.2
CMTM3-207ENST00000564060 HMG20AQ9NP66 347 aa16.28■□□□□ 0.2
CMTM3-207ENST00000564060 A0A0U1RQK1 487 aa16.27■□□□□ 0.2
CMTM3-207ENST00000564060 MYL12BO14950 172 aa16.27■□□□□ 0.2
CMTM3-207ENST00000564060 NPFFO15130 113 aa16.27■□□□□ 0.2
CMTM3-207ENST00000564060 SOX2P48431 317 aa16.27■□□□□ 0.2
CMTM3-207ENST00000564060 BMXP51813 675 aa16.27■□□□□ 0.2
CMTM3-207ENST00000564060 EDDM3BP56851 147 aa16.27■□□□□ 0.2
CMTM3-207ENST00000564060 TMEM200BQ69YZ2 307 aa16.27■□□□□ 0.2
CMTM3-207ENST00000564060 XAF1Q6GPH4 301 aa16.27■□□□□ 0.2
CMTM3-207ENST00000564060 AHSA2Q719I0 299 aa16.27■□□□□ 0.2
CMTM3-207ENST00000564060 PIP4P2Q8N4L2 257 aa16.27■□□□□ 0.2
CMTM3-207ENST00000564060 C3orf56Q8N813 242 aa16.27■□□□□ 0.2
CMTM3-207ENST00000564060 OR4M1Q8NGD0 313 aa16.27■□□□□ 0.2
CMTM3-207ENST00000564060 OR5D18Q8NGL1 313 aa16.27■□□□□ 0.2
CMTM3-207ENST00000564060 TMEM106AQ96A25 262 aa16.27■□□□□ 0.2
CMTM3-207ENST00000564060 SPACA5Q96QH8 159 aa16.27■□□□□ 0.2
CMTM3-207ENST00000564060 DPAGT1Q9H3H5 408 aa16.27■□□□□ 0.2
CMTM3-207ENST00000564060 HEXA-AS1Q9H8Q6 139 aa16.27■□□□□ 0.2
CMTM3-207ENST00000564060 EXOSC4Q9NPD3 245 aaKnown RBP16.27■□□□□ 0.2
CMTM3-207ENST00000564060 NKX1-2Q9UD57 310 aaPredicted RBP16.27■□□□□ 0.2
CMTM3-207ENST00000564060 CLEC2DQ9UHP7 191 aa16.27■□□□□ 0.2
CMTM3-207ENST00000564060 PSORS1C1Q9UIG5 152 aa16.27■□□□□ 0.2
CMTM3-207ENST00000564060 BTBD17A6NE02 478 aa16.26■□□□□ 0.19
CMTM3-207ENST00000564060 ERICH4A6NGS2 130 aa16.26■□□□□ 0.19
CMTM3-207ENST00000564060 SH2D1BO14796 132 aa16.26■□□□□ 0.19
CMTM3-207ENST00000564060 ANGPTL7O43827 346 aa16.26■□□□□ 0.19
CMTM3-207ENST00000564060 PAHP00439 452 aa16.26■□□□□ 0.19
CMTM3-207ENST00000564060 TMEM225BP0DP42 221 aa16.26■□□□□ 0.19
CMTM3-207ENST00000564060 GABRR1P24046 479 aa16.26■□□□□ 0.19
CMTM3-207ENST00000564060 ERVFRD-1P60508 538 aa16.26■□□□□ 0.19
CMTM3-207ENST00000564060 RPL15P61313 204 aaKnown RBP16.26■□□□□ 0.19
CMTM3-207ENST00000564060 PPP3R1P63098 170 aa16.26■□□□□ 0.19
CMTM3-207ENST00000564060 MEF2CQ06413 473 aaPredicted RBP16.26■□□□□ 0.19
CMTM3-207ENST00000564060 KLRD1Q13241 179 aa16.26■□□□□ 0.19
CMTM3-207ENST00000564060 AWAT1Q58HT5 328 aa16.26■□□□□ 0.19
CMTM3-207ENST00000564060 BPIFB6Q8NFQ5 453 aa16.26■□□□□ 0.19
CMTM3-207ENST00000564060 RGP1Q92546 391 aaPredicted RBP16.26■□□□□ 0.19
CMTM3-207ENST00000564060 GPER1Q99527 375 aa16.26■□□□□ 0.19
CMTM3-207ENST00000564060 hADV38S2A0JD32 116 aa16.25■□□□□ 0.19
CMTM3-207ENST00000564060 MEIOCA2RUB1 952 aa16.25■□□□□ 0.19
CMTM3-207ENST00000564060 XPNPEP2O43895 674 aa16.25■□□□□ 0.19
CMTM3-207ENST00000564060 RBP4P02753 201 aa16.25■□□□□ 0.19
CMTM3-207ENST00000564060 CRYBA1P05813 215 aa16.25■□□□□ 0.19
CMTM3-207ENST00000564060 SAA4P35542 130 aa16.25■□□□□ 0.19
CMTM3-207ENST00000564060 ZP1P60852 638 aa16.25■□□□□ 0.19
CMTM3-207ENST00000564060 GRK1Q15835 563 aa16.25■□□□□ 0.19
CMTM3-207ENST00000564060 MIDNQ504T8 468 aa16.25■□□□□ 0.19
CMTM3-207ENST00000564060 YIF1BQ5BJH7 314 aa16.25■□□□□ 0.19
CMTM3-207ENST00000564060 DMKNQ6E0U4 476 aaPredicted RBP16.25■□□□□ 0.19
CMTM3-207ENST00000564060 ZNF529Q6P280 563 aa16.25■□□□□ 0.19
CMTM3-207ENST00000564060 C17orf107Q6ZR85 190 aa16.25■□□□□ 0.19
CMTM3-207ENST00000564060 IL36RNQ9UBH0 155 aa16.25■□□□□ 0.19
CMTM3-207ENST00000564060 GSTK1Q9Y2Q3 226 aa16.25■□□□□ 0.19
CMTM3-207ENST00000564060 IGKV1-12A0A0C4DH73 117 aa16.24■□□□□ 0.19
CMTM3-207ENST00000564060 FUOMA2VDF0 154 aa16.24■□□□□ 0.19
CMTM3-207ENST00000564060 H0YHG0 523 aa16.24■□□□□ 0.19
CMTM3-207ENST00000564060 MGST3O14880 152 aa16.24■□□□□ 0.19
CMTM3-207ENST00000564060 IGKV1D-12P01611 117 aa16.24■□□□□ 0.19
CMTM3-207ENST00000564060 MTNR1BP49286 362 aa16.24■□□□□ 0.19
CMTM3-207ENST00000564060 SNU13P55769 128 aaKnown RBP16.24■□□□□ 0.19
CMTM3-207ENST00000564060 WNT4P56705 351 aa16.24■□□□□ 0.19
CMTM3-207ENST00000564060 ZNF273Q14593 569 aa16.24■□□□□ 0.19
CMTM3-207ENST00000564060 PXT1Q8NFP0 134 aa16.24■□□□□ 0.19
CMTM3-207ENST00000564060 DYRK2Q92630 601 aa16.24■□□□□ 0.19
CMTM3-207ENST00000564060 THRSPQ92748 146 aa16.24■□□□□ 0.19
CMTM3-207ENST00000564060 GHSRQ92847 366 aa16.24■□□□□ 0.19
CMTM3-207ENST00000564060 TMEM138Q9NPI0 162 aa16.24■□□□□ 0.19
CMTM3-207ENST00000564060 SCN3BQ9NY72 215 aa16.24■□□□□ 0.19
CMTM3-207ENST00000564060 TAS2R4Q9NYW5 299 aa16.24■□□□□ 0.19
CMTM3-207ENST00000564060 ZNRD1Q9P1U0 126 aa16.24■□□□□ 0.19
CMTM3-207ENST00000564060 CKLFQ9UBR5 152 aa16.24■□□□□ 0.19
CMTM3-207ENST00000564060 ERGIC3Q9Y282 383 aa16.24■□□□□ 0.19
CMTM3-207ENST00000564060 TMEM82A0PJX8 343 aa16.23■□□□□ 0.19
CMTM3-207ENST00000564060 LALBAP00709 142 aa16.23■□□□□ 0.19
CMTM3-207ENST00000564060 ALDOBP05062 364 aa16.23■□□□□ 0.19
CMTM3-207ENST00000564060 ZNF728P0DKX0 622 aa16.23■□□□□ 0.19
CMTM3-207ENST00000564060 CCL3L1P16619 93 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms