RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 RDH5Q92781 318 aa12.4□□□□□ -0.42
CDH11-207ENST00000563255 EMG1Q92979 244 aaKnown RBP12.4□□□□□ -0.42
CDH11-207ENST00000563255 Q96M66 194 aa12.4□□□□□ -0.42
CDH11-207ENST00000563255 ZNF488Q96MN9 340 aa12.4□□□□□ -0.42
CDH11-207ENST00000563255 SMR3AQ99954 134 aa12.4□□□□□ -0.42
CDH11-207ENST00000563255 NUDT16L1Q9BRJ7 211 aaKnown RBP12.4□□□□□ -0.42
CDH11-207ENST00000563255 SELENOIQ9C0D9 397 aa12.4□□□□□ -0.42
CDH11-207ENST00000563255 TMEM106BQ9NUM4 274 aa12.4□□□□□ -0.42
CDH11-207ENST00000563255 RBFOX1Q9NWB1 397 aaKnown RBP12.4□□□□□ -0.42
CDH11-207ENST00000563255 ST3GAL6Q9Y274 331 aa12.4□□□□□ -0.42
CDH11-207ENST00000563255 FAM25AB3EWG3 89 aa12.39□□□□□ -0.43
CDH11-207ENST00000563255 FAM25CB3EWG5 89 aa12.39□□□□□ -0.43
CDH11-207ENST00000563255 FAM25GB3EWG6 89 aa12.39□□□□□ -0.43
CDH11-207ENST00000563255 TMEM178BH3BS89 294 aa12.39□□□□□ -0.43
CDH11-207ENST00000563255 NXPH2O95156 264 aa12.39□□□□□ -0.43
CDH11-207ENST00000563255 PAX1P15863 534 aa12.39□□□□□ -0.43
CDH11-207ENST00000563255 PRKACAP17612 351 aa12.39□□□□□ -0.43
CDH11-207ENST00000563255 COL8A2P25067 703 aa12.39□□□□□ -0.43
CDH11-207ENST00000563255 EFNA4P52798 201 aa12.39□□□□□ -0.43
CDH11-207ENST00000563255 RBM11P57052 281 aaKnown RBP12.39□□□□□ -0.43
CDH11-207ENST00000563255 IL13RA2Q14627 380 aa12.39□□□□□ -0.43
CDH11-207ENST00000563255 ZNF146Q15072 292 aa12.39□□□□□ -0.43
CDH11-207ENST00000563255 SPIN3Q5JUX0 258 aa12.39□□□□□ -0.43
CDH11-207ENST00000563255 RAB12Q6IQ22 244 aa12.39□□□□□ -0.43
CDH11-207ENST00000563255 FIP1L1Q6UN15 594 aaKnown RBP12.39□□□□□ -0.43
CDH11-207ENST00000563255 BIVMQ86UB2 503 aa12.39□□□□□ -0.43
CDH11-207ENST00000563255 CCL17Q92583 94 aa12.39□□□□□ -0.43
CDH11-207ENST00000563255 ATG5Q9H1Y0 275 aa12.39□□□□□ -0.43
CDH11-207ENST00000563255 SEBOXQ9HB31 216 aaPredicted RBP12.39□□□□□ -0.43
CDH11-207ENST00000563255 TREM2Q9NZC2 230 aa12.39□□□□□ -0.43
CDH11-207ENST00000563255 H3BUI4 141 aa12.38□□□□□ -0.43
CDH11-207ENST00000563255 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.38□□□□□ -0.43
CDH11-207ENST00000563255 RAB27BO00194 218 aa12.38□□□□□ -0.43
CDH11-207ENST00000563255 RP2O75695 350 aa12.38□□□□□ -0.43
CDH11-207ENST00000563255 TPPPO94811 219 aa12.38□□□□□ -0.43
CDH11-207ENST00000563255 FSTL3O95633 263 aa12.38□□□□□ -0.43
CDH11-207ENST00000563255 CYB5R3P00387 301 aaPredicted RBP12.38□□□□□ -0.43
CDH11-207ENST00000563255 KNG1P01042 644 aa12.38□□□□□ -0.43
CDH11-207ENST00000563255 DAOP14920 347 aa12.38□□□□□ -0.43
CDH11-207ENST00000563255 EGR1P18146 543 aa12.38□□□□□ -0.43
CDH11-207ENST00000563255 ETV6P41212 452 aa12.38□□□□□ -0.43
CDH11-207ENST00000563255 LSAMPQ13449 338 aa12.38□□□□□ -0.43
CDH11-207ENST00000563255 MPV17LQ2QL34 196 aa12.38□□□□□ -0.43
CDH11-207ENST00000563255 SMIM21Q3B7S5 101 aa12.38□□□□□ -0.43
CDH11-207ENST00000563255 TEX36Q5VZQ5 186 aa12.38□□□□□ -0.43
CDH11-207ENST00000563255 METAP1DQ6UB28 335 aaPredicted RBP12.38□□□□□ -0.43
CDH11-207ENST00000563255 CCDC190Q86UF4 302 aa12.38□□□□□ -0.43
CDH11-207ENST00000563255 BATF2Q8N1L9 274 aa12.38□□□□□ -0.43
CDH11-207ENST00000563255 OR56B1Q8NGI3 324 aa12.38□□□□□ -0.43
CDH11-207ENST00000563255 YIPF5Q969M3 257 aa12.38□□□□□ -0.43
CDH11-207ENST00000563255 PHF21AQ96BD5 680 aa12.38□□□□□ -0.43
CDH11-207ENST00000563255 DIRAS2Q96HU8 199 aa12.38□□□□□ -0.43
CDH11-207ENST00000563255 NICN1Q9BSH3 213 aa12.38□□□□□ -0.43
CDH11-207ENST00000563255 WDR13Q9H1Z4 485 aa12.38□□□□□ -0.43
CDH11-207ENST00000563255 DIABLOQ9NR28 239 aa12.38□□□□□ -0.43
CDH11-207ENST00000563255 ZNF701Q9NV72 531 aaPredicted RBP12.38□□□□□ -0.43
CDH11-207ENST00000563255 RABL2AQ9UBK7 228 aaPredicted RBP12.38□□□□□ -0.43
CDH11-207ENST00000563255 RABL2BQ9UNT1 228 aa12.38□□□□□ -0.43
CDH11-207ENST00000563255 CACNG2Q9Y698 323 aa12.38□□□□□ -0.43
CDH11-207ENST00000563255 A0A0A6YYD4 124 aa12.37□□□□□ -0.43
CDH11-207ENST00000563255 FOXI3A8MTJ6 420 aaPredicted RBP12.37□□□□□ -0.43
CDH11-207ENST00000563255 WNT9BO14905 357 aa12.37□□□□□ -0.43
CDH11-207ENST00000563255 XRCC3O43542 346 aa12.37□□□□□ -0.43
CDH11-207ENST00000563255 MUC1P15941 1255 aaPredicted RBP12.37□□□□□ -0.43
CDH11-207ENST00000563255 TALDO1P37837 337 aa12.37□□□□□ -0.43
CDH11-207ENST00000563255 PITPNBP48739 271 aa12.37□□□□□ -0.43
CDH11-207ENST00000563255 VEGFCP49767 419 aa12.37□□□□□ -0.43
CDH11-207ENST00000563255 PIGYQ3MUY2 71 aa12.37□□□□□ -0.43
CDH11-207ENST00000563255 CNIH2Q6PI25 160 aa12.37□□□□□ -0.43
CDH11-207ENST00000563255 OR10R2Q8NGX6 335 aa12.37□□□□□ -0.43
CDH11-207ENST00000563255 C18orf12Q96KH6 178 aa12.37□□□□□ -0.43
CDH11-207ENST00000563255 GAL3ST1Q99999 423 aa12.37□□□□□ -0.43
CDH11-207ENST00000563255 IFT22Q9H7X7 185 aa12.37□□□□□ -0.43
CDH11-207ENST00000563255 MYOZ1Q9NP98 299 aaPredicted RBP12.37□□□□□ -0.43
CDH11-207ENST00000563255 NLKQ9UBE8 527 aa12.37□□□□□ -0.43
CDH11-207ENST00000563255 EXTL2Q9UBQ6 330 aa12.37□□□□□ -0.43
CDH11-207ENST00000563255 GLS2Q9UI32 602 aa12.37□□□□□ -0.43
CDH11-207ENST00000563255 DSCAML1Q8TD84 2053 aa12.37□□□□□ -0.43
CDH11-207ENST00000563255 DOCK11Q5JSL3 2073 aa12.36□□□□□ -0.43
CDH11-207ENST00000563255 PPIAL4EA0A075B759 164 aa12.36□□□□□ -0.43
CDH11-207ENST00000563255 TRAV38-1A0A0B4J264 116 aa12.36□□□□□ -0.43
CDH11-207ENST00000563255 OOEPA6NGQ2 149 aa12.36□□□□□ -0.43
CDH11-207ENST00000563255 PPIAL4DF5H284 164 aa12.36□□□□□ -0.43
CDH11-207ENST00000563255 SH2D1BO14796 132 aa12.36□□□□□ -0.43
CDH11-207ENST00000563255 GEMIN2O14893 280 aaKnown RBP12.36□□□□□ -0.43
CDH11-207ENST00000563255 SOCS1O15524 211 aa12.36□□□□□ -0.43
CDH11-207ENST00000563255 PPIAL4FP0DN26 164 aa12.36□□□□□ -0.43
CDH11-207ENST00000563255 CDK2P24941 298 aa12.36□□□□□ -0.43
CDH11-207ENST00000563255 LMO1P25800 156 aa12.36□□□□□ -0.43
CDH11-207ENST00000563255 PTBP1P26599 531 aaKnown RBP eCLIP12.36□□□□□ -0.43
CDH11-207ENST00000563255 MNDAP41218 407 aa12.36□□□□□ -0.43
CDH11-207ENST00000563255 NR4A2P43354 598 aa12.36□□□□□ -0.43
CDH11-207ENST00000563255 TAF9Q16594 264 aa12.36□□□□□ -0.43
CDH11-207ENST00000563255 MICBQ29980 383 aa12.36□□□□□ -0.43
CDH11-207ENST00000563255 SPANXN2Q5MJ10 180 aa12.36□□□□□ -0.43
CDH11-207ENST00000563255 Q6P435 159 aa12.36□□□□□ -0.43
CDH11-207ENST00000563255 BAIAP2L2Q6UXY1 529 aa12.36□□□□□ -0.43
CDH11-207ENST00000563255 BOLLQ8N9W6 283 aaKnown RBP12.36□□□□□ -0.43
CDH11-207ENST00000563255 OR4M1Q8NGD0 313 aa12.36□□□□□ -0.43
CDH11-207ENST00000563255 S100ZQ8WXG8 99 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms