RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 CD24P25063 80 aa10.42□□□□□ -0.74
SF3B3-202ENST00000562722 HTR1DP28221 377 aa10.42□□□□□ -0.74
SF3B3-202ENST00000562722 DUSP1P28562 367 aa10.42□□□□□ -0.74
SF3B3-202ENST00000562722 POU3F4P49335 361 aa10.42□□□□□ -0.74
SF3B3-202ENST00000562722 FUT6P51993 359 aa10.42□□□□□ -0.74
SF3B3-202ENST00000562722 UBE2V2Q15819 145 aa10.42□□□□□ -0.74
SF3B3-202ENST00000562722 NXNL2Q5VZ03 156 aa10.42□□□□□ -0.74
SF3B3-202ENST00000562722 TCF23Q7RTU1 214 aa10.42□□□□□ -0.74
SF3B3-202ENST00000562722 GID4Q8IVV7 300 aa10.42□□□□□ -0.74
SF3B3-202ENST00000562722 ENTHD1Q8IYW4 607 aa10.42□□□□□ -0.74
SF3B3-202ENST00000562722 STMN2Q93045 179 aa10.42□□□□□ -0.74
SF3B3-202ENST00000562722 IL4I1Q96RQ9 567 aa10.42□□□□□ -0.74
SF3B3-202ENST00000562722 KRT84Q9NSB2 600 aa10.42□□□□□ -0.74
SF3B3-202ENST00000562722 DNAH3Q8TD57 4116 aa10.42□□□□□ -0.74
SF3B3-202ENST00000562722 NOTCH3Q9UM47 2321 aa10.41□□□□□ -0.74
SF3B3-202ENST00000562722 IGKV1-27A0A075B6S5 117 aa10.41□□□□□ -0.74
SF3B3-202ENST00000562722 MITFO75030 526 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-202ENST00000562722 OCM2P0CE71 109 aa10.41□□□□□ -0.74
SF3B3-202ENST00000562722 OCMP0CE72 109 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-202ENST00000562722 CALCBP10092 127 aa10.41□□□□□ -0.74
SF3B3-202ENST00000562722 BRS3P32247 399 aa10.41□□□□□ -0.74
SF3B3-202ENST00000562722 DAPP51397 102 aa10.41□□□□□ -0.74
SF3B3-202ENST00000562722 ARHGDIBP52566 201 aa10.41□□□□□ -0.74
SF3B3-202ENST00000562722 SLC35A2P78381 396 aa10.41□□□□□ -0.74
SF3B3-202ENST00000562722 DEFB121Q5J5C9 76 aa10.41□□□□□ -0.74
SF3B3-202ENST00000562722 AADACL4Q5VUY2 407 aa10.41□□□□□ -0.74
SF3B3-202ENST00000562722 FAHD1Q6P587 224 aa10.41□□□□□ -0.74
SF3B3-202ENST00000562722 SSX6Q7RTT6 188 aa10.41□□□□□ -0.74
SF3B3-202ENST00000562722 Q8IYB0 196 aa10.41□□□□□ -0.74
SF3B3-202ENST00000562722 OR10H4Q8NGA5 316 aa10.41□□□□□ -0.74
SF3B3-202ENST00000562722 OR4X2Q8NGF9 303 aa10.41□□□□□ -0.74
SF3B3-202ENST00000562722 TMEM163Q8TC26 289 aa10.41□□□□□ -0.74
SF3B3-202ENST00000562722 NRBF2Q96F24 287 aa10.41□□□□□ -0.74
SF3B3-202ENST00000562722 OCSTAMPQ9BR26 566 aa10.41□□□□□ -0.74
SF3B3-202ENST00000562722 CHST5Q9GZS9 411 aa10.41□□□□□ -0.74
SF3B3-202ENST00000562722 RBFOX1Q9NWB1 397 aaKnown RBP10.41□□□□□ -0.74
SF3B3-202ENST00000562722 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-202ENST00000562722 IL36RNQ9UBH0 155 aa10.41□□□□□ -0.74
SF3B3-202ENST00000562722 GLS2Q9UI32 602 aa10.41□□□□□ -0.74
SF3B3-202ENST00000562722 TSSC4Q9Y5U2 329 aaPredicted RBP10.41□□□□□ -0.74
SF3B3-202ENST00000562722 METTL15A6NJ78 407 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 SIRPB1O00241 398 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 GYG2O15488 501 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 APOL3O95236 402 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 CLIC3O95833 236 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 LPLP06858 475 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 PRKACAP17612 351 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 ATP6V1E1P36543 226 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 ATP1B3P54709 279 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 CD83Q01151 205 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 ABCA11PQ4W5N1 156 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 C9orf152Q5JTZ5 239 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 VAX1Q5SQQ9 334 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 PRAMEF5Q5TYX0 476 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 C16orf82Q7Z2V1 217 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 FAM220AQ7Z4H9 259 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 CATSPERDQ86XM0 798 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 FAM58AQ8N1B3 248 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 ABHD12Q8N2K0 398 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 WFDC9Q8NEX5 89 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 OR52N4Q8NGI2 321 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 OR4P4Q8NGL7 312 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 BCAS4Q8TDM0 211 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 MYDGFQ969H8 173 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 GAL3ST2Q9H3Q3 398 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 LIN7BQ9HAP6 207 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.4□□□□□ -0.74
SF3B3-202ENST00000562722 DPM3Q9P2X0 92 aa10.4□□□□□ -0.74
SF3B3-202ENST00000562722 TRGV10A0A0A0MS01 117 aa10.39□□□□□ -0.75
SF3B3-202ENST00000562722 LOC107986453A0A1B0GWG9 222 aa10.39□□□□□ -0.75
SF3B3-202ENST00000562722 A0A1W2PQL4 384 aaPredicted RBP10.39□□□□□ -0.75
SF3B3-202ENST00000562722 TCRBV3S1A0A5B6 114 aa10.39□□□□□ -0.75
SF3B3-202ENST00000562722 FAM172BPA6NC97 362 aa10.39□□□□□ -0.75
SF3B3-202ENST00000562722 FAM90A22PA8MWA6 464 aa10.39□□□□□ -0.75
SF3B3-202ENST00000562722 MGST3O14880 152 aa10.39□□□□□ -0.75
SF3B3-202ENST00000562722 PSPNO60542 156 aa10.39□□□□□ -0.75
SF3B3-202ENST00000562722 MMP23AO75900 390 aa10.39□□□□□ -0.75
SF3B3-202ENST00000562722 BCL3P20749 454 aa10.39□□□□□ -0.75
SF3B3-202ENST00000562722 RBP2P50120 134 aa10.39□□□□□ -0.75
SF3B3-202ENST00000562722 MTCP1P56278 107 aa10.39□□□□□ -0.75
SF3B3-202ENST00000562722 P2RX3P56373 397 aa10.39□□□□□ -0.75
SF3B3-202ENST00000562722 ZNF91Q05481 1191 aa10.39□□□□□ -0.75
SF3B3-202ENST00000562722 DNAL1Q4LDG9 190 aa10.39□□□□□ -0.75
SF3B3-202ENST00000562722 OR52W1Q6IF63 320 aa10.39□□□□□ -0.75
SF3B3-202ENST00000562722 Q6ZSR3 168 aa10.39□□□□□ -0.75
SF3B3-202ENST00000562722 CCDC54Q8NEL0 328 aa10.39□□□□□ -0.75
SF3B3-202ENST00000562722 ZNF596Q8TC21 504 aa10.39□□□□□ -0.75
SF3B3-202ENST00000562722 PP6455Q8WZ26 134 aa10.39□□□□□ -0.75
SF3B3-202ENST00000562722 RCC1LQ96I51 464 aaKnown RBP10.39□□□□□ -0.75
SF3B3-202ENST00000562722 SLC25A33Q9BSK2 321 aa10.39□□□□□ -0.75
SF3B3-202ENST00000562722 WARS2Q9UGM6 360 aaKnown RBP10.39□□□□□ -0.75
SF3B3-202ENST00000562722 UBE2J1Q9Y385 318 aaPredicted RBP10.39□□□□□ -0.75
SF3B3-202ENST00000562722 TRBV2A0A0J9YWF9 115 aa10.38□□□□□ -0.75
SF3B3-202ENST00000562722 FUOMA2VDF0 154 aa10.38□□□□□ -0.75
SF3B3-202ENST00000562722 SH2D7A6NKC9 451 aaPredicted RBP10.38□□□□□ -0.75
SF3B3-202ENST00000562722 ZAR1LA6NP61 321 aa10.38□□□□□ -0.75
SF3B3-202ENST00000562722 LEUTXA8MZ59 168 aa10.38□□□□□ -0.75
SF3B3-202ENST00000562722 G3V2T6 193 aa10.38□□□□□ -0.75
SF3B3-202ENST00000562722 K7EIL1 84 aa10.38□□□□□ -0.75
SF3B3-202ENST00000562722 TOR1AO14656 332 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms