RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 ZC3HAV1LQ96H79 300 aaKnown RBP6.64□□□□□ -1.35
TCF4-216ENST00000562680 ADAT1Q9BUB4 502 aaKnown RBP6.64□□□□□ -1.35
TCF4-216ENST00000562680 PLSCR2Q9NRY7 297 aa6.64□□□□□ -1.35
TCF4-216ENST00000562680 IL19Q9UHD0 177 aa6.64□□□□□ -1.35
TCF4-216ENST00000562680 EIF4EP06730 217 aaKnown RBP6.64□□□□□ -1.35
TCF4-216ENST00000562680 HLA-DOBP13765 273 aa6.64□□□□□ -1.35
TCF4-216ENST00000562680 PTGFRP43088 359 aa6.64□□□□□ -1.35
TCF4-216ENST00000562680 FABP6P51161 128 aa6.64□□□□□ -1.35
TCF4-216ENST00000562680 LUMP51884 338 aaPredicted RBP6.64□□□□□ -1.35
TCF4-216ENST00000562680 EGR4Q05215 589 aa6.64□□□□□ -1.35
TCF4-216ENST00000562680 FAM27D1Q5T7N8 215 aa6.64□□□□□ -1.35
TCF4-216ENST00000562680 TSPO2Q5TGU0 170 aa6.64□□□□□ -1.35
TCF4-216ENST00000562680 CD276Q5ZPR3 534 aa6.64□□□□□ -1.35
TCF4-216ENST00000562680 TRAT1Q6PIZ9 186 aa6.64□□□□□ -1.35
TCF4-216ENST00000562680 SPNS3Q6ZMD2 512 aa6.64□□□□□ -1.35
TCF4-216ENST00000562680 TMEM229BQ8NBD8 167 aa6.64□□□□□ -1.35
TCF4-216ENST00000562680 C1QTNF6Q9BXI9 259 aa6.64□□□□□ -1.35
TCF4-216ENST00000562680 AUNIPQ9H7T9 357 aa6.64□□□□□ -1.35
TCF4-216ENST00000562680 CACFD1Q9UGQ2 172 aa6.64□□□□□ -1.35
TCF4-216ENST00000562680 ZNF107Q9UII5 783 aaPredicted RBP6.64□□□□□ -1.35
TCF4-216ENST00000562680 SLC33A1O00400 549 aaPredicted RBP6.63□□□□□ -1.35
TCF4-216ENST00000562680 AQP7O14520 342 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 GOSR2O14653 212 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 GDF9O60383 454 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 GOSR1O95249 250 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 CYB5R3P00387 301 aaPredicted RBP6.63□□□□□ -1.35
TCF4-216ENST00000562680 S100A11P31949 105 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 SLC25A35Q3KQZ1 300 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 TMEM41BQ5BJD5 291 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 C17orf78Q8N4C9 275 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 GLYATL2Q8WU03 294 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 CHAC2Q8WUX2 184 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 PTX4Q96A99 478 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 ST6GALNAC2Q9UJ37 374 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 ST3GAL6Q9Y274 331 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 TTC28Q96AY4 2481 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 A0A1B0GTH9 108 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 MPZL1O95297 269 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 MDH2P40926 338 aaKnown RBP6.63□□□□□ -1.35
TCF4-216ENST00000562680 TNFSF10P50591 281 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 KLF3P57682 345 aaPredicted RBP6.63□□□□□ -1.35
TCF4-216ENST00000562680 PRDX4Q13162 271 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 PRR27Q6MZM9 219 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 LGI3Q8N145 548 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 FBXL14Q8N1E6 418 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 ZFP62Q8NB50 900 aaPredicted RBP6.63□□□□□ -1.35
TCF4-216ENST00000562680 AKIRIN1Q9H9L7 192 aaPredicted RBP6.63□□□□□ -1.35
TCF4-216ENST00000562680 KCNJ16Q9NPI9 418 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 FRRS1LQ9P0K9 344 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 CYB5BO43169 146 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 LYZL6O75951 148 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 RAG2P55895 527 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 OR1S1Q8NH92 325 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 EIF5A2Q9GZV4 153 aaKnown RBP6.63□□□□□ -1.35
TCF4-216ENST00000562680 ARV1Q9H2C2 271 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 LYRM2Q9NU23 88 aaPredicted RBP6.63□□□□□ -1.35
TCF4-216ENST00000562680 ELF5Q9UKW6 265 aaPredicted RBP6.63□□□□□ -1.35
TCF4-216ENST00000562680 ELOA3CA0A087WX78 387 aaPredicted RBP6.63□□□□□ -1.35
TCF4-216ENST00000562680 TMEM235A6NFC5 223 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 DGCR2P98153 550 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 CISD2Q8N5K1 135 aaKnown RBP6.63□□□□□ -1.35
TCF4-216ENST00000562680 EDARADDQ8WWZ3 215 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 SEH1LQ96EE3 360 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 SFXN3Q9BWM7 321 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 PARD6GQ9BYG4 376 aaPredicted RBP6.63□□□□□ -1.35
TCF4-216ENST00000562680 SLC25A31Q9H0C2 315 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 C2orf16Q68DN1 1984 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 GVINP1Q7Z2Y8 2422 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 C16orf97H3BN30 126 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 CDX4O14627 284 aaPredicted RBP6.63□□□□□ -1.35
TCF4-216ENST00000562680 CTDSPLO15194 276 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 OBSL1O75147 1896 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 CRYBA1P05813 215 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 UBE2MP61081 183 aaKnown RBP6.63□□□□□ -1.35
TCF4-216ENST00000562680 NHLH1Q02575 133 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 OR5I1Q13606 314 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 GABRA6Q16445 453 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 TAF9Q16594 264 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 NHLRC1Q6VVB1 395 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 CHST5Q9GZS9 411 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 NXF2Q9GZY0 626 aaKnown RBP6.63□□□□□ -1.35
TCF4-216ENST00000562680 CXXC4Q9H2H0 198 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 OR2S2Q9NQN1 319 aa6.63□□□□□ -1.35
TCF4-216ENST00000562680 MPTX1A8MV57 137 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 EFSO43281 561 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 NPIPB7O75200 414 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 GPANK1O95872 356 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 THY1P04216 161 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 ISG15P05161 165 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 VWA1Q6PCB0 445 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 FDCSPQ8NFU4 85 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 OR10J5Q8NHC4 309 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 UPRTQ96BW1 309 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 C20orf85Q9H1P6 137 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 PLEKHF2Q9H8W4 249 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 RNF122Q9H9V4 155 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 RHOFQ9HBH0 211 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 TP53TG5Q9Y2B4 290 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 SNRPGP15A8MWD9 76 aa6.62□□□□□ -1.35
TCF4-216ENST00000562680 H0Y8G0 127 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms