RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 DUSP1P28562 367 aa13.25□□□□□ -0.29
COMMD4-206ENST00000562610 WNT4P56705 351 aa13.25□□□□□ -0.29
COMMD4-206ENST00000562610 EDDM3BP56851 147 aa13.25□□□□□ -0.29
COMMD4-206ENST00000562610 TAS2R43P59537 309 aa13.25□□□□□ -0.29
COMMD4-206ENST00000562610 PPP3R1P63098 170 aa13.25□□□□□ -0.29
COMMD4-206ENST00000562610 GUCA2AQ02747 115 aa13.25□□□□□ -0.29
COMMD4-206ENST00000562610 EDDM3AQ14507 147 aa13.25□□□□□ -0.29
COMMD4-206ENST00000562610 TUSC1Q2TAM9 212 aa13.25□□□□□ -0.29
COMMD4-206ENST00000562610 SPIN3Q5JUX0 258 aa13.25□□□□□ -0.29
COMMD4-206ENST00000562610 DMKNQ6E0U4 476 aaPredicted RBP13.25□□□□□ -0.29
COMMD4-206ENST00000562610 GDPD3Q7L5L3 318 aa13.25□□□□□ -0.29
COMMD4-206ENST00000562610 SATL1Q86VE3 508 aa13.25□□□□□ -0.29
COMMD4-206ENST00000562610 OR51A2Q8NGJ7 313 aa13.25□□□□□ -0.29
COMMD4-206ENST00000562610 C1orf147Q96MC9 270 aaPredicted RBP13.25□□□□□ -0.29
COMMD4-206ENST00000562610 FAM192AQ9GZU8 254 aa13.25□□□□□ -0.29
COMMD4-206ENST00000562610 METTL8Q9H825 291 aaKnown RBP13.25□□□□□ -0.29
COMMD4-206ENST00000562610 ZMAT3Q9HA38 289 aaKnown RBP13.25□□□□□ -0.29
COMMD4-206ENST00000562610 FKBP14Q9NWM8 211 aa13.25□□□□□ -0.29
COMMD4-206ENST00000562610 SCN3BQ9NY72 215 aa13.25□□□□□ -0.29
COMMD4-206ENST00000562610 GLS2Q9UI32 602 aa13.25□□□□□ -0.29
COMMD4-206ENST00000562610 ERGIC3Q9Y282 383 aa13.25□□□□□ -0.29
COMMD4-206ENST00000562610 GSTK1Q9Y2Q3 226 aa13.25□□□□□ -0.29
COMMD4-206ENST00000562610 PCDHGB5Q9Y5G0 923 aa13.25□□□□□ -0.29
COMMD4-206ENST00000562610 A0A1W2PRD5 423 aa13.24□□□□□ -0.29
COMMD4-206ENST00000562610 A0A1W2PRF3 423 aa13.24□□□□□ -0.29
COMMD4-206ENST00000562610 A0A1W2PRM7 423 aa13.24□□□□□ -0.29
COMMD4-206ENST00000562610 PTGES3LE9PB15 166 aa13.24□□□□□ -0.29
COMMD4-206ENST00000562610 RNASEK-C17orf49H0YIS7 233 aa13.24□□□□□ -0.29
COMMD4-206ENST00000562610 K7N7A8 449 aa13.24□□□□□ -0.29
COMMD4-206ENST00000562610 HOXA3O43365 443 aaPredicted RBP13.24□□□□□ -0.29
COMMD4-206ENST00000562610 KDM4BO94953 1096 aa13.24□□□□□ -0.29
COMMD4-206ENST00000562610 ALX3O95076 343 aa13.24□□□□□ -0.29
COMMD4-206ENST00000562610 GABRR1P24046 479 aa13.24□□□□□ -0.29
COMMD4-206ENST00000562610 PRTN3P24158 256 aa13.24□□□□□ -0.29
COMMD4-206ENST00000562610 EEF1B2P24534 225 aaKnown RBP13.24□□□□□ -0.29
COMMD4-206ENST00000562610 C6orf141Q5SZD1 244 aa13.24□□□□□ -0.29
COMMD4-206ENST00000562610 ASPHD2Q6ICH7 369 aa13.24□□□□□ -0.29
COMMD4-206ENST00000562610 METAP1DQ6UB28 335 aaPredicted RBP13.24□□□□□ -0.29
COMMD4-206ENST00000562610 SAXO1Q8IYX7 474 aa13.24□□□□□ -0.29
COMMD4-206ENST00000562610 OR8H2Q8N162 312 aa13.24□□□□□ -0.29
COMMD4-206ENST00000562610 ZNF485Q8NCK3 441 aa13.24□□□□□ -0.29
COMMD4-206ENST00000562610 GHSRQ92847 366 aa13.24□□□□□ -0.29
COMMD4-206ENST00000562610 SLC25A28Q96A46 364 aa13.24□□□□□ -0.29
COMMD4-206ENST00000562610 ORAI1Q96D31 301 aa13.24□□□□□ -0.29
COMMD4-206ENST00000562610 CHST6Q9GZX3 395 aa13.24□□□□□ -0.29
COMMD4-206ENST00000562610 HMG20AQ9NP66 347 aa13.24□□□□□ -0.29
COMMD4-206ENST00000562610 EXOSC4Q9NPD3 245 aaKnown RBP13.24□□□□□ -0.29
COMMD4-206ENST00000562610 A0A0U1RQK1 487 aa13.23□□□□□ -0.29
COMMD4-206ENST00000562610 MEX3AA1L020 520 aaKnown RBP13.23□□□□□ -0.29
COMMD4-206ENST00000562610 SIRPB1O00241 398 aa13.23□□□□□ -0.29
COMMD4-206ENST00000562610 GABRPO00591 440 aa13.23□□□□□ -0.29
COMMD4-206ENST00000562610 ZNF737O75373 536 aa13.23□□□□□ -0.29
COMMD4-206ENST00000562610 CDK1P06493 297 aa13.23□□□□□ -0.29
COMMD4-206ENST00000562610 CCL3L1P16619 93 aa13.23□□□□□ -0.29
COMMD4-206ENST00000562610 MYF6P23409 242 aa13.23□□□□□ -0.29
COMMD4-206ENST00000562610 HSPA13P48723 471 aa13.23□□□□□ -0.29
COMMD4-206ENST00000562610 ZP1P60852 638 aa13.23□□□□□ -0.29
COMMD4-206ENST00000562610 ZNF273Q14593 569 aa13.23□□□□□ -0.29
COMMD4-206ENST00000562610 Q499Y3 187 aa13.23□□□□□ -0.29
COMMD4-206ENST00000562610 YIF1BQ5BJH7 314 aa13.23□□□□□ -0.29
COMMD4-206ENST00000562610 DDI2Q5TDH0 399 aa13.23□□□□□ -0.29
COMMD4-206ENST00000562610 NCR3LG1Q68D85 454 aa13.23□□□□□ -0.29
COMMD4-206ENST00000562610 TMEM200BQ69YZ2 307 aa13.23□□□□□ -0.29
COMMD4-206ENST00000562610 CRIP3Q6Q6R5 217 aa13.23□□□□□ -0.29
COMMD4-206ENST00000562610 OR5D13Q8NGL4 314 aa13.23□□□□□ -0.29
COMMD4-206ENST00000562610 TNFAIP8L1Q8WVP5 186 aa13.23□□□□□ -0.29
COMMD4-206ENST00000562610 GCDHQ92947 438 aaPredicted RBP13.23□□□□□ -0.29
COMMD4-206ENST00000562610 MYDGFQ969H8 173 aa13.23□□□□□ -0.29
COMMD4-206ENST00000562610 SNX22Q96L94 193 aa13.23□□□□□ -0.29
COMMD4-206ENST00000562610 PGLYRP3Q96LB9 341 aa13.23□□□□□ -0.29
COMMD4-206ENST00000562610 NKX3-1Q99801 234 aaPredicted RBP13.23□□□□□ -0.29
COMMD4-206ENST00000562610 MND1Q9BWT6 205 aa13.23□□□□□ -0.29
COMMD4-206ENST00000562610 ANKRD60Q9BZ19 345 aa13.23□□□□□ -0.29
COMMD4-206ENST00000562610 TNFRSF19Q9NS68 423 aa13.23□□□□□ -0.29
COMMD4-206ENST00000562610 TMEM82A0PJX8 343 aa13.22□□□□□ -0.29
COMMD4-206ENST00000562610 NPFFO15130 113 aa13.22□□□□□ -0.29
COMMD4-206ENST00000562610 ATP6V1G2O95670 118 aa13.22□□□□□ -0.29
COMMD4-206ENST00000562610 RNASE1P07998 156 aaKnown RBP13.22□□□□□ -0.29
COMMD4-206ENST00000562610 CELP19835 753 aa13.22□□□□□ -0.29
COMMD4-206ENST00000562610 SCN1BQ07699 218 aa13.22□□□□□ -0.29
COMMD4-206ENST00000562610 ZNF146Q15072 292 aa13.22□□□□□ -0.29
COMMD4-206ENST00000562610 SLC9A3R2Q15599 337 aa13.22□□□□□ -0.29
COMMD4-206ENST00000562610 GRK1Q15835 563 aa13.22□□□□□ -0.29
COMMD4-206ENST00000562610 ZNF529Q6P280 563 aa13.22□□□□□ -0.29
COMMD4-206ENST00000562610 C12orf54Q6X4T0 127 aa13.22□□□□□ -0.29
COMMD4-206ENST00000562610 C17orf107Q6ZR85 190 aa13.22□□□□□ -0.29
COMMD4-206ENST00000562610 C1orf122Q6ZSJ8 110 aa13.22□□□□□ -0.29
COMMD4-206ENST00000562610 PNKDQ8N490 385 aa13.22□□□□□ -0.29
COMMD4-206ENST00000562610 PIP4P2Q8N4L2 257 aa13.22□□□□□ -0.29
COMMD4-206ENST00000562610 NANOGP1Q8N7R0 232 aa13.22□□□□□ -0.29
COMMD4-206ENST00000562610 ZSCAN4Q8NAM6 433 aaPredicted RBP13.22□□□□□ -0.29
COMMD4-206ENST00000562610 OR52N4Q8NGI2 321 aa13.22□□□□□ -0.29
COMMD4-206ENST00000562610 TBC1D15Q8TC07 691 aa13.22□□□□□ -0.29
COMMD4-206ENST00000562610 OR14A2Q96R54 314 aa13.22□□□□□ -0.29
COMMD4-206ENST00000562610 RHOFQ9HBH0 211 aa13.22□□□□□ -0.29
COMMD4-206ENST00000562610 NOX4Q9NPH5 578 aa13.22□□□□□ -0.29
COMMD4-206ENST00000562610 PAK1IP1Q9NWT1 392 aaPredicted RBP13.22□□□□□ -0.29
COMMD4-206ENST00000562610 CKLFQ9UBR5 152 aa13.22□□□□□ -0.29
COMMD4-206ENST00000562610 FAM96BQ9Y3D0 163 aa13.22□□□□□ -0.29
COMMD4-206ENST00000562610 KIAA2026Q5HYC2 2103 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms