RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 FN3KRPQ9HA64 309 aa12.11□□□□□ -0.47
COMMD4-205ENST00000562310 RCC2Q9P258 522 aaKnown RBP12.11□□□□□ -0.47
COMMD4-205ENST00000562310 KCNK7Q9Y2U2 307 aa12.11□□□□□ -0.47
COMMD4-205ENST00000562310 NBEAQ8NFP9 2946 aa12.11□□□□□ -0.47
COMMD4-205ENST00000562310 ANKHD1Q8IWZ3 2542 aaKnown RBP12.1□□□□□ -0.47
COMMD4-205ENST00000562310 CYSRT1A8MQ03 144 aa12.1□□□□□ -0.47
COMMD4-205ENST00000562310 M0R233 179 aa12.1□□□□□ -0.47
COMMD4-205ENST00000562310 SSX5O60225 188 aa12.1□□□□□ -0.47
COMMD4-205ENST00000562310 CD55P08174 381 aa12.1□□□□□ -0.47
COMMD4-205ENST00000562310 SLC6A1P30531 599 aa12.1□□□□□ -0.47
COMMD4-205ENST00000562310 APOBEC3AP31941 199 aaPredicted RBP12.1□□□□□ -0.47
COMMD4-205ENST00000562310 CFHR2P36980 270 aa12.1□□□□□ -0.47
COMMD4-205ENST00000562310 KIR2DL3P43628 341 aa12.1□□□□□ -0.47
COMMD4-205ENST00000562310 SMIM21Q3B7S5 101 aa12.1□□□□□ -0.47
COMMD4-205ENST00000562310 PRAMEF6Q5VXH4 476 aa12.1□□□□□ -0.47
COMMD4-205ENST00000562310 PLET1Q6UQ28 207 aa12.1□□□□□ -0.47
COMMD4-205ENST00000562310 WDR82Q6UXN9 313 aa12.1□□□□□ -0.47
COMMD4-205ENST00000562310 C6orf201Q7Z4U5 140 aa12.1□□□□□ -0.47
COMMD4-205ENST00000562310 DUSP18Q8NEJ0 188 aa12.1□□□□□ -0.47
COMMD4-205ENST00000562310 FAM222BQ8WU58 562 aa12.1□□□□□ -0.47
COMMD4-205ENST00000562310 GTF3AQ92664 365 aaKnown RBP12.1□□□□□ -0.47
COMMD4-205ENST00000562310 OR2V2Q96R30 315 aa12.1□□□□□ -0.47
COMMD4-205ENST00000562310 OCSTAMPQ9BR26 566 aa12.1□□□□□ -0.47
COMMD4-205ENST00000562310 TMEM204Q9BSN7 226 aa12.1□□□□□ -0.47
COMMD4-205ENST00000562310 CHST6Q9GZX3 395 aa12.1□□□□□ -0.47
COMMD4-205ENST00000562310 DPAGT1Q9H3H5 408 aa12.1□□□□□ -0.47
COMMD4-205ENST00000562310 HES4Q9HCC6 221 aa12.1□□□□□ -0.47
COMMD4-205ENST00000562310 HRASLSQ9HDD0 168 aa12.1□□□□□ -0.47
COMMD4-205ENST00000562310 RASL12Q9NYN1 266 aa12.1□□□□□ -0.47
COMMD4-205ENST00000562310 IL19Q9UHD0 177 aa12.1□□□□□ -0.47
COMMD4-205ENST00000562310 GLS2Q9UI32 602 aa12.1□□□□□ -0.47
COMMD4-205ENST00000562310 CHD3Q12873 2000 aaKnown RBP12.1□□□□□ -0.47
COMMD4-205ENST00000562310 hCG_1807616A0A1W2PRN6 198 aa12.09□□□□□ -0.47
COMMD4-205ENST00000562310 MEIS3P1A6NDR6 274 aa12.09□□□□□ -0.47
COMMD4-205ENST00000562310 DEFB108AA8MXU0 73 aa12.09□□□□□ -0.47
COMMD4-205ENST00000562310 ZNF736B4DX44 427 aaPredicted RBP12.09□□□□□ -0.47
COMMD4-205ENST00000562310 B9A039 149 aa12.09□□□□□ -0.47
COMMD4-205ENST00000562310 E7EQL1 145 aa12.09□□□□□ -0.47
COMMD4-205ENST00000562310 F8VVB4 439 aa12.09□□□□□ -0.47
COMMD4-205ENST00000562310 F8VWA3 439 aa12.09□□□□□ -0.47
COMMD4-205ENST00000562310 SPRY3O43610 288 aa12.09□□□□□ -0.47
COMMD4-205ENST00000562310 IGHV1-46P01743 117 aa12.09□□□□□ -0.47
COMMD4-205ENST00000562310 MT-ND4P03905 459 aa12.09□□□□□ -0.47
COMMD4-205ENST00000562310 SPNP16150 400 aa12.09□□□□□ -0.47
COMMD4-205ENST00000562310 NAT1P18440 290 aa12.09□□□□□ -0.47
COMMD4-205ENST00000562310 DTYMKP23919 212 aa12.09□□□□□ -0.47
COMMD4-205ENST00000562310 TNFAIP6P98066 277 aaPredicted RBP12.09□□□□□ -0.47
COMMD4-205ENST00000562310 IKZF1Q13422 519 aa12.09□□□□□ -0.47
COMMD4-205ENST00000562310 SNTB1Q13884 538 aaKnown RBP12.09□□□□□ -0.47
COMMD4-205ENST00000562310 MEF2DQ14814 521 aa12.09□□□□□ -0.47
COMMD4-205ENST00000562310 TESK1Q15569 626 aa12.09□□□□□ -0.47
COMMD4-205ENST00000562310 FAM209AQ5JX71 171 aa12.09□□□□□ -0.47
COMMD4-205ENST00000562310 STEAP1BQ6NZ63 245 aa12.09□□□□□ -0.47
COMMD4-205ENST00000562310 FAM90A1Q86YD7 464 aa12.09□□□□□ -0.47
COMMD4-205ENST00000562310 C11orf53Q8IXP5 236 aa12.09□□□□□ -0.47
COMMD4-205ENST00000562310 ZNF488Q96MN9 340 aa12.09□□□□□ -0.47
COMMD4-205ENST00000562310 DHRS9Q9BPW9 319 aa12.09□□□□□ -0.47
COMMD4-205ENST00000562310 C1orf123Q9NWV4 160 aa12.09□□□□□ -0.47
COMMD4-205ENST00000562310 FBXO9Q9UK97 447 aaPredicted RBP12.09□□□□□ -0.47
COMMD4-205ENST00000562310 ELF5Q9UKW6 265 aaPredicted RBP12.09□□□□□ -0.47
COMMD4-205ENST00000562310 NAV2Q8IVL1 2488 aa12.09□□□□□ -0.47
COMMD4-205ENST00000562310 A0A1B0GVG6 124 aa12.08□□□□□ -0.48
COMMD4-205ENST00000562310 C17orf100A8MU93 164 aa12.08□□□□□ -0.48
COMMD4-205ENST00000562310 SSX4O60224 188 aa12.08□□□□□ -0.48
COMMD4-205ENST00000562310 GOSR1O95249 250 aa12.08□□□□□ -0.48
COMMD4-205ENST00000562310 RAB3DO95716 219 aa12.08□□□□□ -0.48
COMMD4-205ENST00000562310 CD74P04233 296 aa12.08□□□□□ -0.48
COMMD4-205ENST00000562310 PRB1P04280 392 aa12.08□□□□□ -0.48
COMMD4-205ENST00000562310 TNFRSF1AP19438 455 aa12.08□□□□□ -0.48
COMMD4-205ENST00000562310 LOXP28300 417 aaPredicted RBP12.08□□□□□ -0.48
COMMD4-205ENST00000562310 BTCP35070 178 aa12.08□□□□□ -0.48
COMMD4-205ENST00000562310 RBM39Q14498 530 aaKnown RBP12.08□□□□□ -0.48
COMMD4-205ENST00000562310 ZNF146Q15072 292 aa12.08□□□□□ -0.48
COMMD4-205ENST00000562310 ZMYND11Q15326 602 aa12.08□□□□□ -0.48
COMMD4-205ENST00000562310 ZNF672Q499Z4 452 aaPredicted RBP12.08□□□□□ -0.48
COMMD4-205ENST00000562310 PLA1AQ53H76 456 aa12.08□□□□□ -0.48
COMMD4-205ENST00000562310 ATAD3CQ5T2N8 411 aa12.08□□□□□ -0.48
COMMD4-205ENST00000562310 BATF2Q8N1L9 274 aa12.08□□□□□ -0.48
COMMD4-205ENST00000562310 ITLN1Q8WWA0 313 aa12.08□□□□□ -0.48
COMMD4-205ENST00000562310 CREB3L1Q96BA8 519 aa12.08□□□□□ -0.48
COMMD4-205ENST00000562310 PIK3IP1Q96FE7 263 aa12.08□□□□□ -0.48
COMMD4-205ENST00000562310 CMSS1Q9BQ75 279 aaKnown RBP12.08□□□□□ -0.48
COMMD4-205ENST00000562310 SULT4A1Q9BR01 284 aa12.08□□□□□ -0.48
COMMD4-205ENST00000562310 EGLN1Q9GZT9 426 aa12.08□□□□□ -0.48
COMMD4-205ENST00000562310 DYNLRB1Q9NP97 96 aa12.08□□□□□ -0.48
COMMD4-205ENST00000562310 C12orf4Q9NQ89 552 aa12.08□□□□□ -0.48
COMMD4-205ENST00000562310 UFSP2Q9NUQ7 469 aa12.08□□□□□ -0.48
COMMD4-205ENST00000562310 FAIMQ9NVQ4 179 aa12.08□□□□□ -0.48
COMMD4-205ENST00000562310 EDARQ9UNE0 448 aa12.08□□□□□ -0.48
COMMD4-205ENST00000562310 NUBP2Q9Y5Y2 271 aa12.08□□□□□ -0.48
COMMD4-205ENST00000562310 SRRM5B3KS81 715 aa12.07□□□□□ -0.48
COMMD4-205ENST00000562310 MCRIP1C9JLW8 97 aa12.07□□□□□ -0.48
COMMD4-205ENST00000562310 SH2D1BO14796 132 aa12.07□□□□□ -0.48
COMMD4-205ENST00000562310 SIAH2O43255 324 aa12.07□□□□□ -0.48
COMMD4-205ENST00000562310 C1QL1O75973 258 aa12.07□□□□□ -0.48
COMMD4-205ENST00000562310 KNG1P01042 644 aa12.07□□□□□ -0.48
COMMD4-205ENST00000562310 GLRA1P23415 457 aa12.07□□□□□ -0.48
COMMD4-205ENST00000562310 MDH2P40926 338 aaKnown RBP12.07□□□□□ -0.48
COMMD4-205ENST00000562310 SNU13P55769 128 aaKnown RBP12.07□□□□□ -0.48
COMMD4-205ENST00000562310 TAS2R46P59540 309 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms