RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 MINOS1-NBL1R4GNA1 71 aa13.4□□□□□ -0.26
VPS9D1-AS1-201ENST00000562298 METTL15A6NJ78 407 aa13.39□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 G3V2T6 193 aa13.39□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 GATBO75879 557 aaKnown RBP13.39□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 MMP23AO75900 390 aa13.39□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 DNAJC8O75937 253 aaPredicted RBP13.39□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 GABRR1P24046 479 aa13.39□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 DUSP1P28562 367 aa13.39□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 VDAC2P45880 294 aaPredicted RBP13.39□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 NPBWR2P48146 333 aa13.39□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 ZNF91Q05481 1191 aa13.39□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 GRK1Q15835 563 aa13.39□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 ATP6AP1Q15904 470 aa13.39□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 ARSJQ5FYB0 599 aaPredicted RBP13.39□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 OR4P4Q8NGL7 312 aa13.39□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 SGCDQ92629 289 aa13.39□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 RNF166Q96A37 237 aaPredicted RBP13.39□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 BORCS8Q96FH0 119 aa13.39□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 OCSTAMPQ9BR26 566 aa13.39□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 GABARAPL1Q9H0R8 117 aa13.39□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 TMEM133Q9H2Q1 129 aa13.39□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 SEBOXQ9HB31 216 aaPredicted RBP13.39□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 WARS2Q9UGM6 360 aaKnown RBP13.39□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 ZNF281Q9Y2X9 895 aa13.39□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 IGKV1-9A0A0C4DH69 117 aa13.38□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 LOC107986453A0A1B0GWG9 222 aa13.38□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 OR2T7P0C7T2 308 aa13.38□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 CALCBP10092 127 aa13.38□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 BCL3P20749 454 aa13.38□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 PEX2P28328 305 aa13.38□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 HTR1FP30939 366 aa13.38□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 KIR3DL2P43630 455 aa13.38□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 LOXL3P58215 753 aa13.38□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 BAIAP2L2Q6UXY1 529 aa13.38□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 Q8IYB0 196 aa13.38□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 RDH10Q8IZV5 341 aa13.38□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 NDNFQ8TB73 568 aa13.38□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 CLEC7AQ9BXN2 247 aa13.38□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 KMT2CQ8NEZ4 4911 aaKnown RBP13.38□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 TRBV2A0A0J9YWF9 115 aa13.37□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 A0A1W2PRX2 142 aa13.37□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 ENTPD6O75354 484 aa13.37□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 SULT1C4O75897 302 aa13.37□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 ALX3O95076 343 aa13.37□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 SERPINA3P01011 423 aa13.37□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 AZGP1P25311 298 aaKnown RBP13.37□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 POLR2IP36954 125 aaKnown RBP13.37□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 OR3A1P47881 315 aa13.37□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 SNU13P55769 128 aaKnown RBP13.37□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 ISL1P61371 349 aa13.37□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 CD83Q01151 205 aa13.37□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 ZNF146Q15072 292 aa13.37□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 FOXB2Q5VYV0 432 aa13.37□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 FAM58AQ8N1B3 248 aa13.37□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 CCDC54Q8NEL0 328 aa13.37□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 OR10H4Q8NGA5 316 aa13.37□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 OR5AU1Q8NGC0 362 aa13.37□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 C10orf35Q96D05 121 aa13.37□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 ADAT3Q96EY9 351 aaPredicted RBP13.37□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 CIB1Q99828 191 aa13.37□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 ADI1Q9BV57 179 aa13.37□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 MGST3O14880 152 aa13.36□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 UBCP0CG48 685 aaKnown RBP13.36□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 CD24P25063 80 aa13.36□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 HTR1DP28221 377 aa13.36□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 RBP2P50120 134 aa13.36□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 ZNF85Q03923 595 aa13.36□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 TCTEX1D4Q5JR98 221 aa13.36□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 ZBTB49Q6ZSB9 765 aa13.36□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 ENTHD1Q8IYW4 607 aa13.36□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 DNAAF1Q8NEP3 725 aa13.36□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 WFDC9Q8NEX5 89 aa13.36□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 PP6455Q8WZ26 134 aa13.36□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 UBE2J1Q9Y385 318 aaPredicted RBP13.36□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 ALDOBP05062 364 aa13.35□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 IGLL1P15814 213 aa13.35□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 PRKACAP17612 351 aa13.35□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 ERP29P30040 261 aaKnown RBP13.35□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 POU3F4P49335 361 aa13.35□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 ATP1B3P54709 279 aa13.35□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 P2RX3P56373 397 aa13.35□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 IL18R1Q13478 541 aa13.35□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 TP53I3Q53FA7 332 aa13.35□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 SPIN3Q5JUX0 258 aa13.35□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 PRAMEF5Q5TYX0 476 aa13.35□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 TRAPPC6BQ86SZ2 158 aa13.35□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 ZDHHC13Q8IUH4 622 aa13.35□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 EME1Q96AY2 570 aa13.35□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 GNG8Q9UK08 70 aa13.35□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 IGKV1-12A0A0C4DH73 117 aa13.34□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 FAM172BPA6NC97 362 aa13.34□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 SIRPB1O00241 398 aa13.34□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 IGKV1D-12P01611 117 aa13.34□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 IGLV1-47P01700 117 aa13.34□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 CD33P20138 364 aa13.34□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 GDNFP39905 211 aa13.34□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 MTCP1P56278 107 aa13.34□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 C16orf82Q7Z2V1 217 aa13.34□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 RNF144BQ7Z419 303 aa13.34□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 AMIGO2Q86SJ2 522 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms