RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 LIME1Q9H400 295 aa8.42□□□□□ -1.06
SMG1-205ENST00000561947 MBD2Q9UBB5 411 aa8.42□□□□□ -1.06
SMG1-205ENST00000561947 MPC1Q9Y5U8 109 aa8.42□□□□□ -1.06
SMG1-205ENST00000561947 KANTRA0A1W2PQU2 76 aa8.42□□□□□ -1.06
SMG1-205ENST00000561947 BCL2L11O43521 198 aa8.42□□□□□ -1.06
SMG1-205ENST00000561947 RRASP10301 218 aa8.42□□□□□ -1.06
SMG1-205ENST00000561947 IGHV1-2P23083 117 aa8.42□□□□□ -1.06
SMG1-205ENST00000561947 UBA52P62987 128 aaKnown RBP8.42□□□□□ -1.06
SMG1-205ENST00000561947 GUSBP1Q15486 140 aa8.42□□□□□ -1.06
SMG1-205ENST00000561947 TBC1D28Q2M2D7 210 aa8.42□□□□□ -1.06
SMG1-205ENST00000561947 GCNT2Q8N0V5 402 aa8.42□□□□□ -1.06
SMG1-205ENST00000561947 BHLHE23Q8NDY6 225 aa8.42□□□□□ -1.06
SMG1-205ENST00000561947 OR5P3Q8WZ94 311 aa8.42□□□□□ -1.06
SMG1-205ENST00000561947 MTCH1Q9NZJ7 389 aa8.42□□□□□ -1.06
SMG1-205ENST00000561947 EP300Q09472 2414 aaPredicted RBP8.42□□□□□ -1.06
SMG1-205ENST00000561947 CRYM-AS1A6NIL9 109 aa8.41□□□□□ -1.06
SMG1-205ENST00000561947 PRSS44E7EML9 344 aa8.41□□□□□ -1.06
SMG1-205ENST00000561947 TRAPPC2LH3BP13 241 aa8.41□□□□□ -1.06
SMG1-205ENST00000561947 LILRA1O75019 489 aa8.41□□□□□ -1.06
SMG1-205ENST00000561947 CEACAM4O75871 244 aa8.41□□□□□ -1.06
SMG1-205ENST00000561947 SPDEFO95238 335 aa8.41□□□□□ -1.06
SMG1-205ENST00000561947 IFNA2P01563 188 aa8.41□□□□□ -1.06
SMG1-205ENST00000561947 ZNF14P17017 642 aaPredicted RBP8.41□□□□□ -1.06
SMG1-205ENST00000561947 TGFBR3Q03167 851 aa8.41□□□□□ -1.06
SMG1-205ENST00000561947 Q6ZPA2 131 aa8.41□□□□□ -1.06
SMG1-205ENST00000561947 FAM214BQ7L5A3 538 aa8.41□□□□□ -1.06
SMG1-205ENST00000561947 EXTL1Q92935 676 aa8.41□□□□□ -1.06
SMG1-205ENST00000561947 TRBV6-7A0A0A0MS04 114 aa8.41□□□□□ -1.06
SMG1-205ENST00000561947 OR5B21A6NL26 309 aa8.41□□□□□ -1.06
SMG1-205ENST00000561947 F8VVB4 439 aa8.41□□□□□ -1.06
SMG1-205ENST00000561947 F8VWA3 439 aa8.41□□□□□ -1.06
SMG1-205ENST00000561947 J3QW42 95 aa8.41□□□□□ -1.06
SMG1-205ENST00000561947 WISP2O76076 250 aa8.41□□□□□ -1.06
SMG1-205ENST00000561947 NMBP08949 121 aa8.41□□□□□ -1.06
SMG1-205ENST00000561947 RBMXP38159 391 aaKnown RBP8.41□□□□□ -1.06
SMG1-205ENST00000561947 UBE2NP61088 152 aaKnown RBP8.41□□□□□ -1.06
SMG1-205ENST00000561947 MPV17LQ2QL34 196 aa8.41□□□□□ -1.06
SMG1-205ENST00000561947 PLEKHN1Q494U1 663 aaPredicted RBP8.41□□□□□ -1.06
SMG1-205ENST00000561947 SGPP2Q8IWX5 399 aa8.41□□□□□ -1.06
SMG1-205ENST00000561947 CCDC36Q8IYA8 594 aa8.41□□□□□ -1.06
SMG1-205ENST00000561947 ST8SIA2Q92186 375 aa8.41□□□□□ -1.06
SMG1-205ENST00000561947 SARAFQ96BY9 339 aa8.41□□□□□ -1.06
SMG1-205ENST00000561947 METTL8Q9H825 291 aaKnown RBP8.41□□□□□ -1.06
SMG1-205ENST00000561947 MPTX1A8MV57 137 aa8.4□□□□□ -1.06
SMG1-205ENST00000561947 SYNGR1O43759 233 aa8.4□□□□□ -1.06
SMG1-205ENST00000561947 CELA3BP08861 270 aa8.4□□□□□ -1.06
SMG1-205ENST00000561947 ZNF728P0DKX0 622 aa8.4□□□□□ -1.06
SMG1-205ENST00000561947 CEACAM1P13688 526 aa8.4□□□□□ -1.06
SMG1-205ENST00000561947 P2RX3P56373 397 aa8.4□□□□□ -1.06
SMG1-205ENST00000561947 GNG3P63215 75 aa8.4□□□□□ -1.06
SMG1-205ENST00000561947 TOR2AQ5JU69 321 aa8.4□□□□□ -1.06
SMG1-205ENST00000561947 THOC7Q6I9Y2 204 aaKnown RBP8.4□□□□□ -1.06
SMG1-205ENST00000561947 OR2T2Q6IF00 324 aa8.4□□□□□ -1.06
SMG1-205ENST00000561947 MYPOPQ86VE0 399 aaPredicted RBP8.4□□□□□ -1.06
SMG1-205ENST00000561947 ZNF573Q86YE8 665 aa8.4□□□□□ -1.06
SMG1-205ENST00000561947 INO80EQ8NBZ0 244 aaPredicted RBP8.4□□□□□ -1.06
SMG1-205ENST00000561947 MARVELD3Q96A59 401 aa8.4□□□□□ -1.06
SMG1-205ENST00000561947 C2orf50Q96LR7 162 aa8.4□□□□□ -1.06
SMG1-205ENST00000561947 HS3ST6Q96QI5 342 aa8.4□□□□□ -1.06
SMG1-205ENST00000561947 MICU1Q9BPX6 476 aa8.4□□□□□ -1.06
SMG1-205ENST00000561947 C1orf123Q9NWV4 160 aa8.4□□□□□ -1.06
SMG1-205ENST00000561947 RCC2Q9P258 522 aaKnown RBP8.4□□□□□ -1.06
SMG1-205ENST00000561947 KCNMB2Q9Y691 235 aa8.4□□□□□ -1.06
SMG1-205ENST00000561947 ESPL1Q14674 2120 aa8.4□□□□□ -1.06
SMG1-205ENST00000561947 LYZL6O75951 148 aa8.4□□□□□ -1.07
SMG1-205ENST00000561947 RLN2P04090 185 aa8.4□□□□□ -1.07
SMG1-205ENST00000561947 FCGR2CP31995 323 aa8.4□□□□□ -1.07
SMG1-205ENST00000561947 GLP1RP43220 463 aa8.4□□□□□ -1.07
SMG1-205ENST00000561947 NOVA1P51513 510 aaKnown RBP8.4□□□□□ -1.07
SMG1-205ENST00000561947 MRPL49Q13405 166 aaKnown RBP8.4□□□□□ -1.07
SMG1-205ENST00000561947 AANATQ16613 207 aa8.4□□□□□ -1.07
SMG1-205ENST00000561947 BEX5Q5H9J7 111 aa8.4□□□□□ -1.07
SMG1-205ENST00000561947 SPATA46Q5T0L3 261 aa8.4□□□□□ -1.07
SMG1-205ENST00000561947 HAGHLQ6PII5 290 aaPredicted RBP8.4□□□□□ -1.07
SMG1-205ENST00000561947 Q6ZT83 130 aa8.4□□□□□ -1.07
SMG1-205ENST00000561947 POC1AQ8NBT0 407 aa8.4□□□□□ -1.07
SMG1-205ENST00000561947 OR5M9Q8NGP3 310 aa8.4□□□□□ -1.07
SMG1-205ENST00000561947 DCUN1D4Q92564 292 aa8.4□□□□□ -1.07
SMG1-205ENST00000561947 TOMM40LQ969M1 308 aa8.4□□□□□ -1.07
SMG1-205ENST00000561947 OR10C1Q96KK4 312 aa8.4□□□□□ -1.07
SMG1-205ENST00000561947 RNF126Q9BV68 326 aa8.4□□□□□ -1.07
SMG1-205ENST00000561947 WDR13Q9H1Z4 485 aa8.4□□□□□ -1.07
SMG1-205ENST00000561947 CDH20Q9HBT6 801 aa8.4□□□□□ -1.07
SMG1-205ENST00000561947 FAM186AA6NE01 2351 aa8.4□□□□□ -1.07
SMG1-205ENST00000561947 TEX13DA0A0J9YY54 714 aaPredicted RBP8.39□□□□□ -1.07
SMG1-205ENST00000561947 A0A1W2PR80 420 aa8.39□□□□□ -1.07
SMG1-205ENST00000561947 SMPD2O60906 423 aa8.39□□□□□ -1.07
SMG1-205ENST00000561947 ZNF205O95201 554 aa8.39□□□□□ -1.07
SMG1-205ENST00000561947 CNOT4O95628 575 aaKnown RBP8.39□□□□□ -1.07
SMG1-205ENST00000561947 HOXB5P09067 269 aa8.39□□□□□ -1.07
SMG1-205ENST00000561947 IL32P24001 234 aa8.39□□□□□ -1.07
SMG1-205ENST00000561947 IDH3GP51553 393 aaPredicted RBP8.39□□□□□ -1.07
SMG1-205ENST00000561947 PIGPP57054 158 aa8.39□□□□□ -1.07
SMG1-205ENST00000561947 FXYD4P59646 89 aa8.39□□□□□ -1.07
SMG1-205ENST00000561947 RTP5Q14D33 572 aa8.39□□□□□ -1.07
SMG1-205ENST00000561947 GABRA6Q16445 453 aa8.39□□□□□ -1.07
SMG1-205ENST00000561947 SRSF7Q16629 238 aaKnown RBP eCLIP8.39□□□□□ -1.07
SMG1-205ENST00000561947 RGS7BPQ6MZT1 257 aaPredicted RBP8.39□□□□□ -1.07
SMG1-205ENST00000561947 FBXW12Q6X9E4 464 aa8.39□□□□□ -1.07
SMG1-205ENST00000561947 Q6ZS49 121 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms