RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 RPL22L1Q6P5R6 122 aaKnown RBP16.86■□□□□ 0.29
TPM1-232ENST00000561425 FIP1L1Q6UN15 594 aaKnown RBP16.86■□□□□ 0.29
TPM1-232ENST00000561425 SAXO1Q8IYX7 474 aa16.86■□□□□ 0.29
TPM1-232ENST00000561425 OR8H2Q8N162 312 aa16.86■□□□□ 0.29
TPM1-232ENST00000561425 FAM58AQ8N1B3 248 aa16.86■□□□□ 0.29
TPM1-232ENST00000561425 PNKDQ8N490 385 aa16.86■□□□□ 0.29
TPM1-232ENST00000561425 SETD9Q8NE22 299 aa16.86■□□□□ 0.29
TPM1-232ENST00000561425 OR4M1Q8NGD0 313 aa16.86■□□□□ 0.29
TPM1-232ENST00000561425 FBLIM1Q8WUP2 373 aa16.86■□□□□ 0.29
TPM1-232ENST00000561425 RGP1Q92546 391 aaPredicted RBP16.86■□□□□ 0.29
TPM1-232ENST00000561425 DYRK2Q92630 601 aa16.86■□□□□ 0.29
TPM1-232ENST00000561425 TAF15Q92804 592 aaKnown RBP eCLIP16.86■□□□□ 0.29
TPM1-232ENST00000561425 RBFOX1Q9NWB1 397 aaKnown RBP16.86■□□□□ 0.29
TPM1-232ENST00000561425 C1RLQ9NZP8 487 aa16.86■□□□□ 0.29
TPM1-232ENST00000561425 OGG1O15527 345 aa16.85■□□□□ 0.29
TPM1-232ENST00000561425 HAND1O96004 215 aa16.85■□□□□ 0.29
TPM1-232ENST00000561425 IGHV4-59P01825 116 aa16.85■□□□□ 0.29
TPM1-232ENST00000561425 FBP1P09467 338 aa16.85■□□□□ 0.29
TPM1-232ENST00000561425 SAA4P35542 130 aa16.85■□□□□ 0.29
TPM1-232ENST00000561425 RELBQ01201 579 aa16.85■□□□□ 0.29
TPM1-232ENST00000561425 ZNF273Q14593 569 aa16.85■□□□□ 0.29
TPM1-232ENST00000561425 MIDNQ504T8 468 aa16.85■□□□□ 0.29
TPM1-232ENST00000561425 SPIN3Q5JUX0 258 aa16.85■□□□□ 0.29
TPM1-232ENST00000561425 XAF1Q6GPH4 301 aa16.85■□□□□ 0.29
TPM1-232ENST00000561425 ASPHD2Q6ICH7 369 aa16.85■□□□□ 0.29
TPM1-232ENST00000561425 LAIR2Q6ISS4 152 aa16.85■□□□□ 0.29
TPM1-232ENST00000561425 ZSCAN4Q8NAM6 433 aaPredicted RBP16.85■□□□□ 0.29
TPM1-232ENST00000561425 ZNF485Q8NCK3 441 aa16.85■□□□□ 0.29
TPM1-232ENST00000561425 OR52N4Q8NGI2 321 aa16.85■□□□□ 0.29
TPM1-232ENST00000561425 OR5D14Q8NGL3 314 aa16.85■□□□□ 0.29
TPM1-232ENST00000561425 OR13C9Q8NGT0 318 aa16.85■□□□□ 0.29
TPM1-232ENST00000561425 EMG1Q92979 244 aaKnown RBP16.85■□□□□ 0.29
TPM1-232ENST00000561425 COMMD4Q9H0A8 199 aa16.85■□□□□ 0.29
TPM1-232ENST00000561425 DPAGT1Q9H3H5 408 aa16.85■□□□□ 0.29
TPM1-232ENST00000561425 HMG20AQ9NP66 347 aa16.85■□□□□ 0.29
TPM1-232ENST00000561425 IL36RNQ9UBH0 155 aa16.85■□□□□ 0.29
TPM1-232ENST00000561425 FAM96BQ9Y3D0 163 aa16.85■□□□□ 0.29
TPM1-232ENST00000561425 SPRY1O43609 319 aaPredicted RBP16.84■□□□□ 0.29
TPM1-232ENST00000561425 PSPNO60542 156 aa16.84■□□□□ 0.29
TPM1-232ENST00000561425 CYB5AP00167 134 aa16.84■□□□□ 0.29
TPM1-232ENST00000561425 RBP4P02753 201 aa16.84■□□□□ 0.29
TPM1-232ENST00000561425 CCL3L1P16619 93 aa16.84■□□□□ 0.29
TPM1-232ENST00000561425 LMO1P25800 156 aa16.84■□□□□ 0.29
TPM1-232ENST00000561425 POU3F4P49335 361 aa16.84■□□□□ 0.29
TPM1-232ENST00000561425 ZP1P60852 638 aa16.84■□□□□ 0.29
TPM1-232ENST00000561425 MEF2CQ06413 473 aaPredicted RBP16.84■□□□□ 0.29
TPM1-232ENST00000561425 CDK5R1Q15078 307 aa16.84■□□□□ 0.29
TPM1-232ENST00000561425 TAF9Q16594 264 aa16.84■□□□□ 0.29
TPM1-232ENST00000561425 OR2G6Q5TZ20 316 aa16.84■□□□□ 0.29
TPM1-232ENST00000561425 GGHQ92820 318 aa16.84■□□□□ 0.29
TPM1-232ENST00000561425 ZNF184Q99676 751 aaPredicted RBP16.84■□□□□ 0.29
TPM1-232ENST00000561425 MEGF9Q9H1U4 602 aa16.84■□□□□ 0.29
TPM1-232ENST00000561425 HEXA-AS1Q9H8Q6 139 aa16.84■□□□□ 0.29
TPM1-232ENST00000561425 BABAM2Q9NXR7 383 aa16.84■□□□□ 0.29
TPM1-232ENST00000561425 SIRT4Q9Y6E7 314 aaPredicted RBP16.84■□□□□ 0.29
TPM1-232ENST00000561425 A0A1B0GUS0 222 aa16.83■□□□□ 0.28
TPM1-232ENST00000561425 SULT1B1O43704 296 aa16.83■□□□□ 0.28
TPM1-232ENST00000561425 INMTO95050 263 aa16.83■□□□□ 0.28
TPM1-232ENST00000561425 ERVFRD-1P60508 538 aa16.83■□□□□ 0.28
TPM1-232ENST00000561425 SHISA2Q6UWI4 295 aa16.83■□□□□ 0.28
TPM1-232ENST00000561425 TMPRSS11AQ6ZMR5 421 aa16.83■□□□□ 0.28
TPM1-232ENST00000561425 TCF23Q7RTU1 214 aa16.83■□□□□ 0.28
TPM1-232ENST00000561425 ASCC1Q8N9N2 400 aaKnown RBP16.83■□□□□ 0.28
TPM1-232ENST00000561425 BEND2Q8NDZ0 799 aa16.83■□□□□ 0.28
TPM1-232ENST00000561425 TMEM80Q96HE8 168 aa16.83■□□□□ 0.28
TPM1-232ENST00000561425 SPACA5Q96QH8 159 aa16.83■□□□□ 0.28
TPM1-232ENST00000561425 SLITRK2Q9H156 845 aa16.83■□□□□ 0.28
TPM1-232ENST00000561425 NEK6Q9HC98 313 aa16.83■□□□□ 0.28
TPM1-232ENST00000561425 TNFRSF19Q9NS68 423 aa16.83■□□□□ 0.28
TPM1-232ENST00000561425 DHDHQ9UQ10 334 aa16.83■□□□□ 0.28
TPM1-232ENST00000561425 EXOSC1Q9Y3B2 195 aaKnown RBP16.83■□□□□ 0.28
TPM1-232ENST00000561425 hCG_1809904A0A1W2PP81 198 aa16.82■□□□□ 0.28
TPM1-232ENST00000561425 A0A1W2PPE2 198 aa16.82■□□□□ 0.28
TPM1-232ENST00000561425 A0A1W2PR64 198 aa16.82■□□□□ 0.28
TPM1-232ENST00000561425 A0A1W2PRD5 423 aa16.82■□□□□ 0.28
TPM1-232ENST00000561425 A0A1W2PRF3 423 aa16.82■□□□□ 0.28
TPM1-232ENST00000561425 A0A1W2PRM7 423 aa16.82■□□□□ 0.28
TPM1-232ENST00000561425 A0A1W2PRV1 198 aa16.82■□□□□ 0.28
TPM1-232ENST00000561425 MEIOCA2RUB1 952 aa16.82■□□□□ 0.28
TPM1-232ENST00000561425 ANGPTL7O43827 346 aa16.82■□□□□ 0.28
TPM1-232ENST00000561425 GPR137BO60478 399 aa16.82■□□□□ 0.28
TPM1-232ENST00000561425 GNAO1P09471 354 aa16.82■□□□□ 0.28
TPM1-232ENST00000561425 PIPP12273 146 aaPredicted RBP16.82■□□□□ 0.28
TPM1-232ENST00000561425 MDKP21741 143 aaPredicted RBP16.82■□□□□ 0.28
TPM1-232ENST00000561425 ERP29P30040 261 aaKnown RBP16.82■□□□□ 0.28
TPM1-232ENST00000561425 KISS1Q15726 138 aa16.82■□□□□ 0.28
TPM1-232ENST00000561425 OR52N1Q8NH53 320 aa16.82■□□□□ 0.28
TPM1-232ENST00000561425 SGMS2Q8NHU3 365 aa16.82■□□□□ 0.28
TPM1-232ENST00000561425 TFAP2CQ92754 450 aa16.82■□□□□ 0.28
TPM1-232ENST00000561425 PLCXD1Q9NUJ7 323 aa16.82■□□□□ 0.28
TPM1-232ENST00000561425 CLEC2DQ9UHP7 191 aa16.82■□□□□ 0.28
TPM1-232ENST00000561425 FAM90A8PA6NJQ4 464 aa16.81■□□□□ 0.28
TPM1-232ENST00000561425 LALBAP00709 142 aa16.81■□□□□ 0.28
TPM1-232ENST00000561425 ZNF728P0DKX0 622 aa16.81■□□□□ 0.28
TPM1-232ENST00000561425 PRKACAP17612 351 aa16.81■□□□□ 0.28
TPM1-232ENST00000561425 AANATQ16613 207 aa16.81■□□□□ 0.28
TPM1-232ENST00000561425 GDPD3Q7L5L3 318 aa16.81■□□□□ 0.28
TPM1-232ENST00000561425 C8orf59Q8N0T1 100 aaPredicted RBP16.81■□□□□ 0.28
TPM1-232ENST00000561425 Q8NFD4 153 aa16.81■□□□□ 0.28
TPM1-232ENST00000561425 PXT1Q8NFP0 134 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms