RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 CITED2Q99967 270 aaPredicted RBP9.36□□□□□ -0.91
USP3-220ENST00000561381 CHST5Q9GZS9 411 aa9.36□□□□□ -0.91
USP3-220ENST00000561381 ABCB10Q9NRK6 738 aa9.36□□□□□ -0.91
USP3-220ENST00000561381 RBFOX1Q9NWB1 397 aaKnown RBP9.36□□□□□ -0.91
USP3-220ENST00000561381 WARS2Q9UGM6 360 aaKnown RBP9.36□□□□□ -0.91
USP3-220ENST00000561381 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.36□□□□□ -0.91
USP3-220ENST00000561381 LOC107986453A0A1B0GWG9 222 aa9.35□□□□□ -0.91
USP3-220ENST00000561381 METTL15A6NJ78 407 aa9.35□□□□□ -0.91
USP3-220ENST00000561381 PSPNO60542 156 aa9.35□□□□□ -0.91
USP3-220ENST00000561381 HAND1O96004 215 aa9.35□□□□□ -0.91
USP3-220ENST00000561381 RBP4P02753 201 aa9.35□□□□□ -0.91
USP3-220ENST00000561381 OR2T7P0C7T2 308 aa9.35□□□□□ -0.91
USP3-220ENST00000561381 HTR1FP30939 366 aa9.35□□□□□ -0.91
USP3-220ENST00000561381 KIR3DL2P43630 455 aa9.35□□□□□ -0.91
USP3-220ENST00000561381 NPBWR2P48146 333 aa9.35□□□□□ -0.91
USP3-220ENST00000561381 FUT6P51993 359 aa9.35□□□□□ -0.91
USP3-220ENST00000561381 SNU13P55769 128 aaKnown RBP9.35□□□□□ -0.91
USP3-220ENST00000561381 FBLN7Q53RD9 439 aa9.35□□□□□ -0.91
USP3-220ENST00000561381 BAIAP2L2Q6UXY1 529 aa9.35□□□□□ -0.91
USP3-220ENST00000561381 OR4S1Q8NGB4 309 aa9.35□□□□□ -0.91
USP3-220ENST00000561381 EMG1Q92979 244 aaKnown RBP9.35□□□□□ -0.91
USP3-220ENST00000561381 R3HDM4Q96D70 268 aa9.35□□□□□ -0.91
USP3-220ENST00000561381 ADAT3Q96EY9 351 aaPredicted RBP9.35□□□□□ -0.91
USP3-220ENST00000561381 WNT10AQ9GZT5 417 aa9.35□□□□□ -0.91
USP3-220ENST00000561381 GABARAPL1Q9H0R8 117 aa9.35□□□□□ -0.91
USP3-220ENST00000561381 KIAA2026Q5HYC2 2103 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 IGHV2-26A0A0B4J1V2 119 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 IGKV1-9A0A0C4DH69 117 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 hADV38S2A0JD32 116 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 GATBO75879 557 aaKnown RBP9.34□□□□□ -0.91
USP3-220ENST00000561381 SULT1C4O75897 302 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 BCL3P20749 454 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 GABRR1P24046 479 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 POU3F4P49335 361 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 DYNLT3P51808 116 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 OR12D2P58182 307 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 ZNF85Q03923 595 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 ZNF91Q05481 1191 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 MEF2CQ06413 473 aaPredicted RBP9.34□□□□□ -0.91
USP3-220ENST00000561381 SLC34A1Q06495 639 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 GRK1Q15835 563 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 TP53I3Q53FA7 332 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 NDUFA11Q86Y39 141 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 ZDHHC13Q8IUH4 622 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 ZNF676Q8N7Q3 588 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 DTX3Q8N9I9 347 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 NDNFQ8TB73 568 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 BCAS4Q8TDM0 211 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 BORCS8Q96FH0 119 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 ADI1Q9BV57 179 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 PRSS22Q9GZN4 317 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 GNG8Q9UK08 70 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 PITPNC1Q9UKF7 332 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 LINC00312Q9Y6C7 94 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 SESN1Q9Y6P5 492 aa9.34□□□□□ -0.91
USP3-220ENST00000561381 A0A1W2PRX2 142 aa9.33□□□□□ -0.92
USP3-220ENST00000561381 F2RL2O00254 374 aa9.33□□□□□ -0.92
USP3-220ENST00000561381 ENTPD6O75354 484 aa9.33□□□□□ -0.92
USP3-220ENST00000561381 CD24P25063 80 aa9.33□□□□□ -0.92
USP3-220ENST00000561381 FASP25445 335 aa9.33□□□□□ -0.92
USP3-220ENST00000561381 PEX2P28328 305 aa9.33□□□□□ -0.92
USP3-220ENST00000561381 ATP6V1E1P36543 226 aa9.33□□□□□ -0.92
USP3-220ENST00000561381 OR3A1P47881 315 aa9.33□□□□□ -0.92
USP3-220ENST00000561381 ISL1P61371 349 aa9.33□□□□□ -0.92
USP3-220ENST00000561381 EMX1Q04741 257 aaPredicted RBP9.33□□□□□ -0.92
USP3-220ENST00000561381 ARSJQ5FYB0 599 aaPredicted RBP9.33□□□□□ -0.92
USP3-220ENST00000561381 MINOS1Q5TGZ0 78 aa9.33□□□□□ -0.92
USP3-220ENST00000561381 RNF144BQ7Z419 303 aa9.33□□□□□ -0.92
USP3-220ENST00000561381 FAM58AQ8N1B3 248 aa9.33□□□□□ -0.92
USP3-220ENST00000561381 RFT1Q96AA3 541 aa9.33□□□□□ -0.92
USP3-220ENST00000561381 EME1Q96AY2 570 aa9.33□□□□□ -0.92
USP3-220ENST00000561381 TMEM133Q9H2Q1 129 aa9.33□□□□□ -0.92
USP3-220ENST00000561381 RIBC2Q9H4K1 309 aa9.33□□□□□ -0.92
USP3-220ENST00000561381 AP4S1Q9Y587 144 aa9.33□□□□□ -0.92
USP3-220ENST00000561381 MINOS1-NBL1R4GNA1 71 aa9.33□□□□□ -0.92
USP3-220ENST00000561381 IGKV1-12A0A0C4DH73 117 aa9.32□□□□□ -0.92
USP3-220ENST00000561381 TRBV2A0A0J9YWF9 115 aa9.32□□□□□ -0.92
USP3-220ENST00000561381 FAM172BPA6NC97 362 aa9.32□□□□□ -0.92
USP3-220ENST00000561381 FAM90A22PA8MWA6 464 aa9.32□□□□□ -0.92
USP3-220ENST00000561381 SIRPB1O00241 398 aa9.32□□□□□ -0.92
USP3-220ENST00000561381 PIN1P1O15428 100 aa9.32□□□□□ -0.92
USP3-220ENST00000561381 XPNPEP2O43895 674 aa9.32□□□□□ -0.92
USP3-220ENST00000561381 PEX14O75381 377 aa9.32□□□□□ -0.92
USP3-220ENST00000561381 SERPINA3P01011 423 aa9.32□□□□□ -0.92
USP3-220ENST00000561381 IGKV1D-12P01611 117 aa9.32□□□□□ -0.92
USP3-220ENST00000561381 PRKACAP17612 351 aa9.32□□□□□ -0.92
USP3-220ENST00000561381 ATF1P18846 271 aa9.32□□□□□ -0.92
USP3-220ENST00000561381 VDAC2P45880 294 aaPredicted RBP9.32□□□□□ -0.92
USP3-220ENST00000561381 RBP2P50120 134 aa9.32□□□□□ -0.92
USP3-220ENST00000561381 ATP1B3P54709 279 aa9.32□□□□□ -0.92
USP3-220ENST00000561381 MTCP1P56278 107 aa9.32□□□□□ -0.92
USP3-220ENST00000561381 BNIP1Q12981 228 aa9.32□□□□□ -0.92
USP3-220ENST00000561381 ZNF146Q15072 292 aa9.32□□□□□ -0.92
USP3-220ENST00000561381 PRAMEF5Q5TYX0 476 aa9.32□□□□□ -0.92
USP3-220ENST00000561381 CCDC54Q8NEL0 328 aa9.32□□□□□ -0.92
USP3-220ENST00000561381 OR4F17Q8NGA8 305 aa9.32□□□□□ -0.92
USP3-220ENST00000561381 OR4P4Q8NGL7 312 aa9.32□□□□□ -0.92
USP3-220ENST00000561381 OR2G2Q8NGZ5 317 aa9.32□□□□□ -0.92
USP3-220ENST00000561381 MRAPQ8TCY5 172 aa9.32□□□□□ -0.92
USP3-220ENST00000561381 PHF21AQ96BD5 680 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms